RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 PLCG2P16885 1265 aa7.22□□□□□ -1.25
SIK3-208ENST00000472648 ID4P47928 161 aa7.22□□□□□ -1.25
SIK3-208ENST00000472648 ZP2Q05996 745 aa7.22□□□□□ -1.25
SIK3-208ENST00000472648 TCF15Q12870 199 aa7.22□□□□□ -1.25
SIK3-208ENST00000472648 TTLL4Q14679 1199 aa7.22□□□□□ -1.25
SIK3-208ENST00000472648 GNASQ5JWF2 1037 aa7.22□□□□□ -1.25
SIK3-208ENST00000472648 METTL16Q86W50 562 aaKnown RBP7.22□□□□□ -1.25
SIK3-208ENST00000472648 MAPKAPK5Q8IW41 473 aa7.22□□□□□ -1.25
SIK3-208ENST00000472648 TGFBRAP1Q8WUH2 860 aa7.22□□□□□ -1.25
SIK3-208ENST00000472648 ATOH1Q92858 354 aaPredicted RBP7.22□□□□□ -1.25
SIK3-208ENST00000472648 NSUN4Q96CB9 384 aaKnown RBP7.22□□□□□ -1.25
SIK3-208ENST00000472648 SCLYQ96I15 445 aa7.22□□□□□ -1.25
SIK3-208ENST00000472648 NOC4LQ9BVI4 516 aaKnown RBP7.22□□□□□ -1.25
SIK3-208ENST00000472648 SIL1Q9H173 461 aa7.22□□□□□ -1.25
SIK3-208ENST00000472648 WNT8AQ9H1J5 351 aa7.22□□□□□ -1.25
SIK3-208ENST00000472648 ZHX1Q9UKY1 873 aaPredicted RBP7.22□□□□□ -1.25
SIK3-208ENST00000472648 DIS3Q9Y2L1 958 aaKnown RBP7.22□□□□□ -1.25
SIK3-208ENST00000472648 WDR87Q6ZQQ6 2873 aa7.22□□□□□ -1.25
SIK3-208ENST00000472648 DMDP11532 3685 aa7.22□□□□□ -1.25
SIK3-208ENST00000472648 FLT1P17948 1338 aa7.22□□□□□ -1.25
SIK3-208ENST00000472648 ZBTB22O15209 634 aa7.21□□□□□ -1.26
SIK3-208ENST00000472648 ARHGEF15O94989 841 aa7.21□□□□□ -1.26
SIK3-208ENST00000472648 BAG3O95817 575 aa7.21□□□□□ -1.26
SIK3-208ENST00000472648 SLC25A27O95847 323 aa7.21□□□□□ -1.26
SIK3-208ENST00000472648 ADORA1P30542 326 aa7.21□□□□□ -1.26
SIK3-208ENST00000472648 KCTD2Q14681 263 aa7.21□□□□□ -1.26
SIK3-208ENST00000472648 ATG9AQ7Z3C6 839 aa7.21□□□□□ -1.26
SIK3-208ENST00000472648 DEFB128Q7Z7B8 93 aa7.21□□□□□ -1.26
SIK3-208ENST00000472648 HERC6Q8IVU3 1022 aa7.21□□□□□ -1.26
SIK3-208ENST00000472648 PHOSPHO2Q8TCD6 241 aa7.21□□□□□ -1.26
SIK3-208ENST00000472648 ACER1Q8TDN7 264 aa7.21□□□□□ -1.26
SIK3-208ENST00000472648 ZNF384Q8TF68 577 aa7.21□□□□□ -1.26
SIK3-208ENST00000472648 AATFQ9NY61 560 aaKnown RBP eCLIP7.21□□□□□ -1.26
SIK3-208ENST00000472648 RAI14Q9P0K7 980 aa7.21□□□□□ -1.26
SIK3-208ENST00000472648 SAP30BPQ9UHR5 308 aaKnown RBP7.21□□□□□ -1.26
SIK3-208ENST00000472648 MUTYHQ9UIF7 546 aa7.21□□□□□ -1.26
SIK3-208ENST00000472648 MTUS1Q9ULD2 1270 aa7.21□□□□□ -1.26
SIK3-208ENST00000472648 PALD1Q9ULE6 856 aa7.21□□□□□ -1.26
SIK3-208ENST00000472648 BAZ2AQ9UIF9 1905 aaKnown RBP7.21□□□□□ -1.26
SIK3-208ENST00000472648 H3BQ06 376 aaPredicted RBP7.2□□□□□ -1.26
SIK3-208ENST00000472648 FLOT1O75955 427 aa7.2□□□□□ -1.26
SIK3-208ENST00000472648 CIAO1O76071 339 aa7.2□□□□□ -1.26
SIK3-208ENST00000472648 IRS1P35568 1242 aa7.2□□□□□ -1.26
SIK3-208ENST00000472648 IRX5P78411 483 aaPredicted RBP7.2□□□□□ -1.26
SIK3-208ENST00000472648 CCDC27Q2M243 656 aa7.2□□□□□ -1.26
SIK3-208ENST00000472648 ABCB5Q2M3G0 1257 aa7.2□□□□□ -1.26
SIK3-208ENST00000472648 ZNF792Q3KQV3 632 aa7.2□□□□□ -1.26
SIK3-208ENST00000472648 EP400NLQ6ZTU2 488 aa7.2□□□□□ -1.26
SIK3-208ENST00000472648 BMP8AQ7Z5Y6 402 aa7.2□□□□□ -1.26
SIK3-208ENST00000472648 ADHFE1Q8IWW8 467 aa7.2□□□□□ -1.26
SIK3-208ENST00000472648 MSL3Q8N5Y2 521 aaKnown RBP7.2□□□□□ -1.26
SIK3-208ENST00000472648 PBXIP1Q96AQ6 731 aa7.2□□□□□ -1.26
SIK3-208ENST00000472648 POP1Q99575 1024 aaKnown RBP7.2□□□□□ -1.26
SIK3-208ENST00000472648 UPF3AQ9H1J1 476 aaKnown RBP7.2□□□□□ -1.26
SIK3-208ENST00000472648 CABP5Q9NP86 173 aa7.2□□□□□ -1.26
SIK3-208ENST00000472648 FBXO3Q9UK99 471 aa7.2□□□□□ -1.26
SIK3-208ENST00000472648 CACNA1GO43497 2377 aa7.2□□□□□ -1.26
SIK3-208ENST00000472648 FANCIQ9NVI1 1328 aa7.2□□□□□ -1.26
SIK3-208ENST00000472648 RIF1Q5UIP0 2472 aaKnown RBP7.19□□□□□ -1.26
SIK3-208ENST00000472648 SOWAHBA6NEL2 793 aa7.19□□□□□ -1.26
SIK3-208ENST00000472648 TMEM221A6NGB7 291 aa7.19□□□□□ -1.26
SIK3-208ENST00000472648 C19orf67A6NJJ6 358 aa7.19□□□□□ -1.26
SIK3-208ENST00000472648 M0R296 226 aa7.19□□□□□ -1.26
SIK3-208ENST00000472648 B4GALT4O60513 344 aa7.19□□□□□ -1.26
SIK3-208ENST00000472648 VAMP4O75379 141 aa7.19□□□□□ -1.26
SIK3-208ENST00000472648 KCNJ6P48051 423 aa7.19□□□□□ -1.26
SIK3-208ENST00000472648 RFX5P48382 616 aaPredicted RBP7.19□□□□□ -1.26
SIK3-208ENST00000472648 GJA9P57773 515 aa7.19□□□□□ -1.26
SIK3-208ENST00000472648 ITGA7Q13683 1181 aa7.19□□□□□ -1.26
SIK3-208ENST00000472648 CERKLQ49MI3 558 aaPredicted RBP7.19□□□□□ -1.26
SIK3-208ENST00000472648 HERC4Q5GLZ8 1057 aaPredicted RBP7.19□□□□□ -1.26
SIK3-208ENST00000472648 NAA16Q6N069 864 aaPredicted RBP7.19□□□□□ -1.26
SIK3-208ENST00000472648 TATDN1Q6P1N9 297 aa7.19□□□□□ -1.26
SIK3-208ENST00000472648 CXCL17Q6UXB2 119 aa7.19□□□□□ -1.26
SIK3-208ENST00000472648 SPRED2Q7Z698 418 aa7.19□□□□□ -1.26
SIK3-208ENST00000472648 NEK9Q8TD19 979 aa7.19□□□□□ -1.26
SIK3-208ENST00000472648 EDAQ92838 391 aa7.19□□□□□ -1.26
SIK3-208ENST00000472648 ATG4CQ96DT6 458 aa7.19□□□□□ -1.26
SIK3-208ENST00000472648 ZBED2Q9BTP6 218 aa7.19□□□□□ -1.26
SIK3-208ENST00000472648 SEZ6LQ9BYH1 1024 aa7.19□□□□□ -1.26
SIK3-208ENST00000472648 TRPV6Q9H1D0 765 aa7.19□□□□□ -1.26
SIK3-208ENST00000472648 LRP2BPQ9P2M1 347 aa7.19□□□□□ -1.26
SIK3-208ENST00000472648 CACNA1HO95180 2353 aa7.19□□□□□ -1.26
SIK3-208ENST00000472648 DNAH14Q0VDD8 3507 aa7.19□□□□□ -1.26
SIK3-208ENST00000472648 SCN10AQ9Y5Y9 1956 aa7.19□□□□□ -1.26
SIK3-208ENST00000472648 LCHNA4D1U4 455 aa7.18□□□□□ -1.26
SIK3-208ENST00000472648 PRR23AA6NEV1 266 aa7.18□□□□□ -1.26
SIK3-208ENST00000472648 CABYRO75952 493 aa7.18□□□□□ -1.26
SIK3-208ENST00000472648 SNAI1O95863 264 aaPredicted RBP7.18□□□□□ -1.26
SIK3-208ENST00000472648 DSG3P32926 999 aa7.18□□□□□ -1.26
SIK3-208ENST00000472648 RFC2P35250 354 aa7.18□□□□□ -1.26
SIK3-208ENST00000472648 COPB2P35606 906 aa7.18□□□□□ -1.26
SIK3-208ENST00000472648 IL15P40933 162 aaPredicted RBP7.18□□□□□ -1.26
SIK3-208ENST00000472648 BEX3Q00994 111 aa7.18□□□□□ -1.26
SIK3-208ENST00000472648 ACVR2BQ13705 512 aa7.18□□□□□ -1.26
SIK3-208ENST00000472648 MVPQ14764 893 aaKnown RBP7.18□□□□□ -1.26
SIK3-208ENST00000472648 TMEM132BQ14DG7 1078 aa7.18□□□□□ -1.26
SIK3-208ENST00000472648 CCDC144BQ3MJ40 725 aa7.18□□□□□ -1.26
SIK3-208ENST00000472648 TBC1D9Q6ZT07 1266 aa7.18□□□□□ -1.26
SIK3-208ENST00000472648 ASCL5Q7RTU5 278 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms