RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 MROH8Q9H579 483 aa11.3□□□□□ -0.6
VCL-204ENST00000472585 ARMT1Q9H993 441 aa11.3□□□□□ -0.6
VCL-204ENST00000472585 MSRAQ9UJ68 235 aa11.3□□□□□ -0.6
VCL-204ENST00000472585 ARIH1Q9Y4X5 557 aaPredicted RBP11.3□□□□□ -0.6
VCL-204ENST00000472585 FLOT1O75955 427 aa11.29□□□□□ -0.6
VCL-204ENST00000472585 CHRM1P11229 460 aaPredicted RBP11.29□□□□□ -0.6
VCL-204ENST00000472585 FAAP100Q0VG06 881 aa11.29□□□□□ -0.6
VCL-204ENST00000472585 PPIGQ13427 754 aaKnown RBP eCLIP11.29□□□□□ -0.6
VCL-204ENST00000472585 AAK1Q2M2I8 961 aa11.29□□□□□ -0.6
VCL-204ENST00000472585 C16orf59Q7L2K0 433 aa11.29□□□□□ -0.6
VCL-204ENST00000472585 ITPRIPQ8IWB1 547 aa11.29□□□□□ -0.6
VCL-204ENST00000472585 RHPN1Q8TCX5 695 aa11.29□□□□□ -0.6
VCL-204ENST00000472585 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.29□□□□□ -0.6
VCL-204ENST00000472585 VCPKMTQ9H867 229 aa11.29□□□□□ -0.6
VCL-204ENST00000472585 CHD9Q3L8U1 2897 aa11.28□□□□□ -0.6
VCL-204ENST00000472585 A0A1W2PQ45 241 aaPredicted RBP11.28□□□□□ -0.6
VCL-204ENST00000472585 A0A1W2PQY0 241 aa11.28□□□□□ -0.6
VCL-204ENST00000472585 GOLIM4O00461 696 aa11.28□□□□□ -0.6
VCL-204ENST00000472585 ADAMTS4O75173 837 aa11.28□□□□□ -0.6
VCL-204ENST00000472585 TIMP1P01033 207 aa11.28□□□□□ -0.6
VCL-204ENST00000472585 EEF2P13639 858 aaKnown RBP11.28□□□□□ -0.6
VCL-204ENST00000472585 PBX2P40425 430 aa11.28□□□□□ -0.6
VCL-204ENST00000472585 CDK8P49336 464 aa11.28□□□□□ -0.6
VCL-204ENST00000472585 RAB30Q15771 203 aa11.28□□□□□ -0.6
VCL-204ENST00000472585 C12orf60Q5U649 245 aa11.28□□□□□ -0.6
VCL-204ENST00000472585 CCSAPQ6IQ19 270 aaPredicted RBP11.28□□□□□ -0.6
VCL-204ENST00000472585 TMEM179Q6ZVK1 233 aa11.28□□□□□ -0.6
VCL-204ENST00000472585 RIOX2Q8IUF8 465 aa11.28□□□□□ -0.6
VCL-204ENST00000472585 SIRT2Q8IXJ6 389 aa11.28□□□□□ -0.6
VCL-204ENST00000472585 MB21D1Q8N884 522 aa11.28□□□□□ -0.6
VCL-204ENST00000472585 NUP133Q8WUM0 1156 aa11.28□□□□□ -0.6
VCL-204ENST00000472585 TOX2Q96NM4 488 aa11.28□□□□□ -0.6
VCL-204ENST00000472585 NECAB3Q96P71 396 aaPredicted RBP11.28□□□□□ -0.6
VCL-204ENST00000472585 TINF2Q9BSI4 451 aa11.28□□□□□ -0.6
VCL-204ENST00000472585 CRNKL1Q9BZJ0 848 aaKnown RBP11.28□□□□□ -0.6
VCL-204ENST00000472585 SYNGAP1Q96PV0 1343 aa11.28□□□□□ -0.6
VCL-204ENST00000472585 A0A0G2JMZ2 1700 aa11.27□□□□□ -0.61
VCL-204ENST00000472585 MYADML2A6NDP7 307 aa11.27□□□□□ -0.61
VCL-204ENST00000472585 GRXCR1A8MXD5 290 aa11.27□□□□□ -0.61
VCL-204ENST00000472585 CCER2I3L3R5 266 aa11.27□□□□□ -0.61
VCL-204ENST00000472585 APBB1O00213 710 aa11.27□□□□□ -0.61
VCL-204ENST00000472585 ADCY6O43306 1168 aa11.27□□□□□ -0.61
VCL-204ENST00000472585 SNAI1O95863 264 aaPredicted RBP11.27□□□□□ -0.61
VCL-204ENST00000472585 FCER1AP12319 257 aa11.27□□□□□ -0.61
VCL-204ENST00000472585 ICA1Q05084 483 aa11.27□□□□□ -0.61
VCL-204ENST00000472585 ADGRE1Q14246 886 aa11.27□□□□□ -0.61
VCL-204ENST00000472585 SKIV2LQ15477 1246 aaKnown RBP11.27□□□□□ -0.61
VCL-204ENST00000472585 MFSD5Q6N075 450 aa11.27□□□□□ -0.61
VCL-204ENST00000472585 TMED8Q6PL24 325 aaPredicted RBP11.27□□□□□ -0.61
VCL-204ENST00000472585 ANKRD33Q7Z3H0 272 aa11.27□□□□□ -0.61
VCL-204ENST00000472585 MICALL1Q8N3F8 863 aa11.27□□□□□ -0.61
VCL-204ENST00000472585 TMEM199Q8N511 208 aa11.27□□□□□ -0.61
VCL-204ENST00000472585 KLHDC9Q8NEP7 349 aa11.27□□□□□ -0.61
VCL-204ENST00000472585 PANK1Q8TE04 598 aa11.27□□□□□ -0.61
VCL-204ENST00000472585 SLC28A3Q9HAS3 691 aa11.27□□□□□ -0.61
VCL-204ENST00000472585 STARD7Q9NQZ5 370 aa11.27□□□□□ -0.61
VCL-204ENST00000472585 CXXC1Q9P0U4 656 aaPredicted RBP11.27□□□□□ -0.61
VCL-204ENST00000472585 NRBP1Q9UHY1 535 aa11.27□□□□□ -0.61
VCL-204ENST00000472585 ZNF214Q9UL59 606 aaPredicted RBP11.27□□□□□ -0.61
VCL-204ENST00000472585 RIPK3Q9Y572 518 aa11.27□□□□□ -0.61
VCL-204ENST00000472585 GBF1Q92538 1859 aa11.27□□□□□ -0.61
VCL-204ENST00000472585 MUC6Q6W4X9 2439 aa11.26□□□□□ -0.61
VCL-204ENST00000472585 USP17L12C9JPN9 530 aa11.26□□□□□ -0.61
VCL-204ENST00000472585 USP17L21D6R901 530 aa11.26□□□□□ -0.61
VCL-204ENST00000472585 VWA5AO00534 786 aa11.26□□□□□ -0.61
VCL-204ENST00000472585 MBD4O95243 580 aa11.26□□□□□ -0.61
VCL-204ENST00000472585 BMP1P13497 986 aa11.26□□□□□ -0.61
VCL-204ENST00000472585 STAT3P40763 770 aa11.26□□□□□ -0.61
VCL-204ENST00000472585 TMEM240Q5SV17 173 aa11.26□□□□□ -0.61
VCL-204ENST00000472585 PSRC1Q6PGN9 363 aaPredicted RBP11.26□□□□□ -0.61
VCL-204ENST00000472585 ZNF467Q7Z7K2 595 aaPredicted RBP11.26□□□□□ -0.61
VCL-204ENST00000472585 MMP19Q99542 508 aa11.26□□□□□ -0.61
VCL-204ENST00000472585 DNAJC2Q99543 621 aaKnown RBP11.26□□□□□ -0.61
VCL-204ENST00000472585 TSEN34Q9BSV6 310 aaKnown RBP11.26□□□□□ -0.61
VCL-204ENST00000472585 LRFN3Q9BTN0 628 aa11.26□□□□□ -0.61
VCL-204ENST00000472585 MTIF3Q9H2K0 278 aaKnown RBP11.26□□□□□ -0.61
VCL-204ENST00000472585 SWAP70Q9UH65 585 aa11.26□□□□□ -0.61
VCL-204ENST00000472585 MROH7Q68CQ1 1323 aa11.26□□□□□ -0.61
VCL-204ENST00000472585 WDR46O15213 610 aaKnown RBP11.25□□□□□ -0.61
VCL-204ENST00000472585 SLC25A27O95847 323 aa11.25□□□□□ -0.61
VCL-204ENST00000472585 AKR1A1P14550 325 aa11.25□□□□□ -0.61
VCL-204ENST00000472585 ADD2P35612 726 aa11.25□□□□□ -0.61
VCL-204ENST00000472585 ACLYP53396 1101 aa11.25□□□□□ -0.61
VCL-204ENST00000472585 TTF1Q15361 905 aaPredicted RBP11.25□□□□□ -0.61
VCL-204ENST00000472585 TMEM31Q5JXX7 168 aa11.25□□□□□ -0.61
VCL-204ENST00000472585 FAM83BQ5T0W9 1011 aa11.25□□□□□ -0.61
VCL-204ENST00000472585 CTR9Q6PD62 1173 aa11.25□□□□□ -0.61
VCL-204ENST00000472585 C16orf86Q6ZW13 317 aa11.25□□□□□ -0.61
VCL-204ENST00000472585 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.25□□□□□ -0.61
VCL-204ENST00000472585 VTI1AQ96AJ9 217 aa11.25□□□□□ -0.61
VCL-204ENST00000472585 FGD4Q96M96 766 aa11.25□□□□□ -0.61
VCL-204ENST00000472585 NUP88Q99567 741 aaPredicted RBP11.25□□□□□ -0.61
VCL-204ENST00000472585 NKX2-4Q9H2Z4 354 aa11.25□□□□□ -0.61
VCL-204ENST00000472585 BOLA2Q9H3K6 86 aa11.25□□□□□ -0.61
VCL-204ENST00000472585 PPP1R9AQ9ULJ8 1098 aa11.25□□□□□ -0.61
VCL-204ENST00000472585 PCDHB8Q9UN66 801 aa11.25□□□□□ -0.61
VCL-204ENST00000472585 DIS3Q9Y2L1 958 aaKnown RBP11.25□□□□□ -0.61
VCL-204ENST00000472585 DNAJC25-GNG10A0A024R161 153 aa11.24□□□□□ -0.61
VCL-204ENST00000472585 MOXD2PA6NHM9 499 aa11.24□□□□□ -0.61
VCL-204ENST00000472585 CTAGE5O15320 804 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms