RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 OXER1Q8TDS5 423 aa14.99□□□□□ -0.01
SCAMP4-207ENST00000472442 SAP30BPQ9UHR5 308 aaKnown RBP14.99□□□□□ -0.01
SCAMP4-207ENST00000472442 HPSEQ9Y251 543 aa14.99□□□□□ -0.01
SCAMP4-207ENST00000472442 NR5A1Q13285 461 aa14.98□□□□□ -0.01
SCAMP4-207ENST00000472442 TMTC3Q6ZXV5 915 aa14.98□□□□□ -0.01
SCAMP4-207ENST00000472442 METTL16Q86W50 562 aaKnown RBP14.98□□□□□ -0.01
SCAMP4-207ENST00000472442 RBM28Q9NW13 759 aaKnown RBP14.98□□□□□ -0.01
SCAMP4-207ENST00000472442 GAKO14976 1311 aa14.98□□□□□ -0.01
SCAMP4-207ENST00000472442 NAV1Q8NEY1 1877 aa14.98□□□□□ -0.01
SCAMP4-207ENST00000472442 PRPF3O43395 683 aaKnown RBP14.98□□□□□ -0.01
SCAMP4-207ENST00000472442 CALM1P0DP23 149 aa14.98□□□□□ -0.01
SCAMP4-207ENST00000472442 CALM2P0DP24 149 aa14.98□□□□□ -0.01
SCAMP4-207ENST00000472442 CALM3P0DP25 149 aa14.98□□□□□ -0.01
SCAMP4-207ENST00000472442 PDE6BP35913 854 aa14.98□□□□□ -0.01
SCAMP4-207ENST00000472442 CHMP4BP1P59074 171 aa14.98□□□□□ -0.01
SCAMP4-207ENST00000472442 BRD3Q15059 726 aa14.98□□□□□ -0.01
SCAMP4-207ENST00000472442 SRBD1Q8N5C6 995 aaKnown RBP14.98□□□□□ -0.01
SCAMP4-207ENST00000472442 TBC1D22AQ8WUA7 517 aa14.98□□□□□ -0.01
SCAMP4-207ENST00000472442 COA1Q9GZY4 146 aa14.98□□□□□ -0.01
SCAMP4-207ENST00000472442 MRPL44Q9H9J2 332 aaKnown RBP14.98□□□□□ -0.01
SCAMP4-207ENST00000472442 EFCC1Q9HA90 598 aa14.98□□□□□ -0.01
SCAMP4-207ENST00000472442 RGS17Q9UGC6 210 aaPredicted RBP14.98□□□□□ -0.01
SCAMP4-207ENST00000472442 V9GY48 417 aaPredicted RBP14.98□□□□□ -0.01
SCAMP4-207ENST00000472442 MTF1Q14872 753 aa14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 LEKR1Q6ZMV7 388 aa14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 CLIC6Q96NY7 704 aa14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 FOXP1Q9H334 677 aaPredicted RBP14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 VPS54Q9P1Q0 977 aa14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 PUF60Q9UHX1 559 aaKnown RBP14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 MYH6P13533 1939 aa14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 ALDH1B1P30837 517 aa14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 FOXP4Q8IVH2 680 aaPredicted RBP14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 CERS5Q8N5B7 392 aa14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 IQUBQ8NA54 791 aa14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 FLT1P17948 1338 aa14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 CNTNAP5Q8WYK1 1306 aa14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 USP17L3A6NCW0 530 aa14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 USP17L4A6NCW7 530 aa14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 PPP6R2O75170 966 aa14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 BMP6P22004 513 aa14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 SPECC1LQ69YQ0 1117 aa14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 USP17L1Q7RTZ2 530 aa14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 TEX11Q8IYF3 940 aa14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 MASTLQ96GX5 879 aa14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 ANKZF1Q9H8Y5 726 aa14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 PCDHA5Q9Y5H7 936 aa14.97□□□□□ -0.01
SCAMP4-207ENST00000472442 DDX60LQ5H9U9 1706 aaKnown RBP14.96□□□□□ -0.01
SCAMP4-207ENST00000472442 N4BP1O75113 896 aaKnown RBP14.96□□□□□ -0.01
SCAMP4-207ENST00000472442 NOP2P46087 812 aaKnown RBP14.96□□□□□ -0.01
SCAMP4-207ENST00000472442 SAFBQ15424 915 aaKnown RBP eCLIP14.96□□□□□ -0.01
SCAMP4-207ENST00000472442 LONRF3Q496Y0 759 aa14.96□□□□□ -0.01
SCAMP4-207ENST00000472442 BEND6Q5SZJ8 279 aaPredicted RBP14.96□□□□□ -0.01
SCAMP4-207ENST00000472442 MXD3Q9BW11 206 aa14.96□□□□□ -0.01
SCAMP4-207ENST00000472442 ZC3H12CQ9C0D7 883 aaKnown RBP14.96□□□□□ -0.01
SCAMP4-207ENST00000472442 LZTFL1Q9NQ48 299 aa14.96□□□□□ -0.01
SCAMP4-207ENST00000472442 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.96□□□□□ -0.01
SCAMP4-207ENST00000472442 DAGLAQ9Y4D2 1042 aa14.96□□□□□ -0.01
SCAMP4-207ENST00000472442 FOXN1O15353 648 aa14.96□□□□□ -0.02
SCAMP4-207ENST00000472442 MYO1BO43795 1136 aa14.96□□□□□ -0.02
SCAMP4-207ENST00000472442 CUTAO60888 179 aa14.96□□□□□ -0.02
SCAMP4-207ENST00000472442 DOK7Q18PE1 504 aa14.96□□□□□ -0.02
SCAMP4-207ENST00000472442 DPP8Q6V1X1 898 aaPredicted RBP14.96□□□□□ -0.02
SCAMP4-207ENST00000472442 SRGAP1Q7Z6B7 1085 aa14.96□□□□□ -0.02
SCAMP4-207ENST00000472442 PNKPQ96T60 521 aa14.96□□□□□ -0.02
SCAMP4-207ENST00000472442 PHF20Q9BVI0 1012 aa14.96□□□□□ -0.02
SCAMP4-207ENST00000472442 SUGCTQ9HAC7 445 aa14.96□□□□□ -0.02
SCAMP4-207ENST00000472442 MKNK2Q9HBH9 465 aa14.96□□□□□ -0.02
SCAMP4-207ENST00000472442 VEGFAP15692 232 aaPredicted RBP14.95□□□□□ -0.02
SCAMP4-207ENST00000472442 RASA1P20936 1047 aa14.95□□□□□ -0.02
SCAMP4-207ENST00000472442 FOXR1Q6PIV2 292 aa14.95□□□□□ -0.02
SCAMP4-207ENST00000472442 DGKHQ86XP1 1220 aa14.95□□□□□ -0.02
SCAMP4-207ENST00000472442 CNNM3Q8NE01 707 aa14.95□□□□□ -0.02
SCAMP4-207ENST00000472442 ANKS1AQ92625 1134 aa14.95□□□□□ -0.02
SCAMP4-207ENST00000472442 AKAP17AQ02040 695 aaKnown RBP14.95□□□□□ -0.02
SCAMP4-207ENST00000472442 NPY5RQ15761 445 aa14.95□□□□□ -0.02
SCAMP4-207ENST00000472442 EARS2Q5JPH6 523 aaKnown RBP14.95□□□□□ -0.02
SCAMP4-207ENST00000472442 CTCFLQ8NI51 663 aaPredicted RBP14.95□□□□□ -0.02
SCAMP4-207ENST00000472442 FAN1Q9Y2M0 1017 aa14.95□□□□□ -0.02
SCAMP4-207ENST00000472442 NFE2L3Q9Y4A8 694 aa14.95□□□□□ -0.02
SCAMP4-207ENST00000472442 A0A0U1RQJ8 604 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 SOWAHDA6NJG2 315 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 WWC2Q6AWC2 1192 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 HDXQ7Z353 690 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 TRMT44Q8IYL2 757 aaKnown RBP14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 JMYQ8N9B5 988 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 ATRIPQ8WXE1 791 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 FAM205CA6NFA0 338 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 F8W031 263 aaPredicted RBP14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 FMR1Q06787 632 aaKnown RBP eCLIP14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 RESP18Q5W5W9 173 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 POTEAQ6S8J7 498 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 AMOTL1Q8IY63 956 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 HNRNPLLQ8WVV9 542 aaKnown RBP14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 ZNF622Q969S3 477 aaKnown RBP eCLIP14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 TCP11L1Q9NUJ3 509 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 BAZ2BQ9UIF8 2168 aaKnown RBP14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 IVLP07476 585 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 CCDC175P0C221 793 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 TSPY3P0CV98 308 aa14.94□□□□□ -0.02
SCAMP4-207ENST00000472442 TSPY8P0CW00 308 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms