RNA–Protein interactions for RNA: ENST00000472348.1

PCOLCE-205, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 960 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-205ENST00000472348 FAM83BQ5T0W9 1011 aa18.66■□□□□ 0.58
PCOLCE-205ENST00000472348 GADL1Q6ZQY3 521 aa18.66■□□□□ 0.58
PCOLCE-205ENST00000472348 INTS4Q96HW7 963 aaKnown RBP18.66■□□□□ 0.58
PCOLCE-205ENST00000472348 TMX3Q96JJ7 454 aa18.66■□□□□ 0.58
PCOLCE-205ENST00000472348 SLF1Q9BQI6 1058 aa18.66■□□□□ 0.58
PCOLCE-205ENST00000472348 RNF26Q9BY78 433 aaPredicted RBP18.66■□□□□ 0.58
PCOLCE-205ENST00000472348 PPP1R9AQ9ULJ8 1098 aa18.66■□□□□ 0.58
PCOLCE-205ENST00000472348 TMEM232C9JQI7 657 aa18.65■□□□□ 0.58
PCOLCE-205ENST00000472348 ATP2A1O14983 1001 aa18.65■□□□□ 0.58
PCOLCE-205ENST00000472348 CD2BP2O95400 341 aaKnown RBP18.65■□□□□ 0.58
PCOLCE-205ENST00000472348 DSG3P32926 999 aa18.65■□□□□ 0.58
PCOLCE-205ENST00000472348 FUT2Q10981 343 aa18.65■□□□□ 0.58
PCOLCE-205ENST00000472348 SCRN1Q12765 414 aa18.65■□□□□ 0.58
PCOLCE-205ENST00000472348 CCDC96Q2M329 555 aa18.65■□□□□ 0.58
PCOLCE-205ENST00000472348 HSCBQ8IWL3 235 aa18.65■□□□□ 0.58
PCOLCE-205ENST00000472348 SPICE1Q8N0Z3 855 aa18.65■□□□□ 0.58
PCOLCE-205ENST00000472348 STK36Q9NRP7 1315 aa18.65■□□□□ 0.58
PCOLCE-205ENST00000472348 BTBD19C9JJ37 291 aa18.64■□□□□ 0.57
PCOLCE-205ENST00000472348 hCG_1984214I3L0E3 225 aa18.64■□□□□ 0.57
PCOLCE-205ENST00000472348 CPLX1O14810 134 aa18.64■□□□□ 0.57
PCOLCE-205ENST00000472348 CDC27P30260 824 aa18.64■□□□□ 0.57
PCOLCE-205ENST00000472348 GCLCP48506 637 aaPredicted RBP18.64■□□□□ 0.57
PCOLCE-205ENST00000472348 KIF23Q02241 960 aaPredicted RBP18.64■□□□□ 0.57
PCOLCE-205ENST00000472348 BECN1Q14457 450 aa18.64■□□□□ 0.57
PCOLCE-205ENST00000472348 TREML2Q5T2D2 321 aa18.64■□□□□ 0.57
PCOLCE-205ENST00000472348 KCTD1Q719H9 257 aa18.64■□□□□ 0.57
PCOLCE-205ENST00000472348 IFNL1Q8IU54 200 aa18.64■□□□□ 0.57
PCOLCE-205ENST00000472348 STAG2Q8N3U4 1231 aa18.64■□□□□ 0.57
PCOLCE-205ENST00000472348 ZNF713Q8N859 430 aaPredicted RBP18.64■□□□□ 0.57
PCOLCE-205ENST00000472348 ZIC5Q96T25 663 aa18.64■□□□□ 0.57
PCOLCE-205ENST00000472348 PARK7Q99497 189 aaKnown RBP18.64■□□□□ 0.57
PCOLCE-205ENST00000472348 PTPN18Q99952 460 aa18.64■□□□□ 0.57
PCOLCE-205ENST00000472348 MYL10Q9BUA6 226 aa18.64■□□□□ 0.57
PCOLCE-205ENST00000472348 COL11A1P12107 1806 aaPredicted RBP18.64■□□□□ 0.57
PCOLCE-205ENST00000472348 PDHXO00330 501 aa18.63■□□□□ 0.57
PCOLCE-205ENST00000472348 FOXN1O15353 648 aa18.63■□□□□ 0.57
PCOLCE-205ENST00000472348 FLOT1O75955 427 aa18.63■□□□□ 0.57
PCOLCE-205ENST00000472348 ADD1P35611 737 aaKnown RBP18.63■□□□□ 0.57
PCOLCE-205ENST00000472348 IRX3P78415 501 aaPredicted RBP18.63■□□□□ 0.57
PCOLCE-205ENST00000472348 HMGN5P82970 282 aaKnown RBP18.63■□□□□ 0.57
PCOLCE-205ENST00000472348 SYDE2Q5VT97 1194 aa18.63■□□□□ 0.57
PCOLCE-205ENST00000472348 TANGO6Q9C0B7 1094 aa18.63■□□□□ 0.57
PCOLCE-205ENST00000472348 ASCC2Q9H1I8 757 aaPredicted RBP18.63■□□□□ 0.57
PCOLCE-205ENST00000472348 RANBP17Q9H2T7 1088 aaKnown RBP18.63■□□□□ 0.57
PCOLCE-205ENST00000472348 WBP1LQ9NX94 342 aa18.63■□□□□ 0.57
PCOLCE-205ENST00000472348 PRR12Q9ULL5 1215 aa18.63■□□□□ 0.57
PCOLCE-205ENST00000472348 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.63■□□□□ 0.57
PCOLCE-205ENST00000472348 PRPF3O43395 683 aaKnown RBP18.62■□□□□ 0.57
PCOLCE-205ENST00000472348 RAD21O60216 631 aa18.62■□□□□ 0.57
PCOLCE-205ENST00000472348 PDIA4P13667 645 aaKnown RBP18.62■□□□□ 0.57
PCOLCE-205ENST00000472348 NBPF11Q86T75 865 aa18.62■□□□□ 0.57
PCOLCE-205ENST00000472348 TRIM22Q8IYM9 498 aa18.62■□□□□ 0.57
PCOLCE-205ENST00000472348 SRBD1Q8N5C6 995 aaKnown RBP18.62■□□□□ 0.57
PCOLCE-205ENST00000472348 SMARCC2Q8TAQ2 1214 aa18.62■□□□□ 0.57
PCOLCE-205ENST00000472348 SLC38A10Q9HBR0 1119 aa18.62■□□□□ 0.57
PCOLCE-205ENST00000472348 CNTNAP5Q8WYK1 1306 aa18.62■□□□□ 0.57
PCOLCE-205ENST00000472348 PCNTO95613 3336 aa18.61■□□□□ 0.57
PCOLCE-205ENST00000472348 FRMPD2Q68DX3 1309 aaPredicted RBP18.61■□□□□ 0.57
PCOLCE-205ENST00000472348 SPDYE16A6NNV3 312 aaPredicted RBP18.61■□□□□ 0.57
PCOLCE-205ENST00000472348 IGF2BP3O00425 579 aaKnown RBP eCLIP18.61■□□□□ 0.57
PCOLCE-205ENST00000472348 CYTH3O43739 400 aa18.61■□□□□ 0.57
PCOLCE-205ENST00000472348 LARGE1O95461 756 aa18.61■□□□□ 0.57
PCOLCE-205ENST00000472348 RXRAP19793 462 aa18.61■□□□□ 0.57
PCOLCE-205ENST00000472348 COPB2P35606 906 aa18.61■□□□□ 0.57
PCOLCE-205ENST00000472348 HERVK_113P62684 666 aa18.61■□□□□ 0.57
PCOLCE-205ENST00000472348 NOM1Q5C9Z4 860 aaKnown RBP18.61■□□□□ 0.57
PCOLCE-205ENST00000472348 ADGRF4Q8IZF3 695 aa18.61■□□□□ 0.57
PCOLCE-205ENST00000472348 FAM43AQ8N2R8 423 aa18.61■□□□□ 0.57
PCOLCE-205ENST00000472348 NUP88Q99567 741 aaPredicted RBP18.61■□□□□ 0.57
PCOLCE-205ENST00000472348 JMJD4Q9H9V9 463 aa18.61■□□□□ 0.57
PCOLCE-205ENST00000472348 GPCPD1Q9NPB8 672 aa18.61■□□□□ 0.57
PCOLCE-205ENST00000472348 TSHZ2Q9NRE2 1034 aa18.61■□□□□ 0.57
PCOLCE-205ENST00000472348 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.61■□□□□ 0.57
PCOLCE-205ENST00000472348 NAP1L2Q9ULW6 460 aaPredicted RBP18.61■□□□□ 0.57
PCOLCE-205ENST00000472348 RABGAP1Q9Y3P9 1069 aa18.61■□□□□ 0.57
PCOLCE-205ENST00000472348 PNMA6FA0A0J9YX94 578 aa18.6■□□□□ 0.57
PCOLCE-205ENST00000472348 VWA5AO00534 786 aa18.6■□□□□ 0.57
PCOLCE-205ENST00000472348 ZBTB5O15062 677 aa18.6■□□□□ 0.57
PCOLCE-205ENST00000472348 CA12O43570 354 aa18.6■□□□□ 0.57
PCOLCE-205ENST00000472348 ZBED4O75132 1171 aa18.6■□□□□ 0.57
PCOLCE-205ENST00000472348 DEXIO95424 95 aa18.6■□□□□ 0.57
PCOLCE-205ENST00000472348 FMNL1O95466 1100 aaPredicted RBP18.6■□□□□ 0.57
PCOLCE-205ENST00000472348 GOLGA8HP0CJ92 632 aa18.6■□□□□ 0.57
PCOLCE-205ENST00000472348 ANP32AP39687 249 aaKnown RBP18.6■□□□□ 0.57
PCOLCE-205ENST00000472348 CCT2P78371 535 aaKnown RBP18.6■□□□□ 0.57
PCOLCE-205ENST00000472348 MAP2K1Q02750 393 aaPredicted RBP18.6■□□□□ 0.57
PCOLCE-205ENST00000472348 DGKZQ13574 1117 aa18.6■□□□□ 0.57
PCOLCE-205ENST00000472348 TTBK2Q6IQ55 1244 aa18.6■□□□□ 0.57
PCOLCE-205ENST00000472348 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.6■□□□□ 0.57
PCOLCE-205ENST00000472348 SAMD3Q8N6K7 520 aa18.6■□□□□ 0.57
PCOLCE-205ENST00000472348 WASF1Q92558 559 aa18.6■□□□□ 0.57
PCOLCE-205ENST00000472348 RRP36Q96EU6 259 aaKnown RBP18.6■□□□□ 0.57
PCOLCE-205ENST00000472348 SAGE1Q9NXZ1 904 aa18.6■□□□□ 0.57
PCOLCE-205ENST00000472348 MORF4L1Q9UBU8 362 aa18.6■□□□□ 0.57
PCOLCE-205ENST00000472348 KIF3AQ9Y496 699 aa18.6■□□□□ 0.57
PCOLCE-205ENST00000472348 BAZ2BQ9UIF8 2168 aaKnown RBP18.59■□□□□ 0.57
PCOLCE-205ENST00000472348 ADGRA2Q96PE1 1338 aa18.59■□□□□ 0.57
PCOLCE-205ENST00000472348 PLEKHA8P1O95397 391 aa18.59■□□□□ 0.57
PCOLCE-205ENST00000472348 ST3GAL1Q11201 340 aa18.59■□□□□ 0.57
PCOLCE-205ENST00000472348 MKRN3Q13064 507 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms