RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 ARAP1Q96P48 1450 aa14.52□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 MAGEA1P43355 309 aa14.52□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 ARHGAP4P98171 946 aa14.52□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 NEUROG2Q9H2A3 272 aa14.52□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 CPSF2Q9P2I0 782 aaKnown RBP14.52□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 K7ENM7 598 aa14.52□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 KRT71Q3SY84 523 aa14.52□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 SFMBT2Q5VUG0 894 aa14.52□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 EEPD1Q7L9B9 569 aa14.52□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 LSM14BQ9BX40 385 aaKnown RBP14.52□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 OPHN1O60890 802 aa14.52□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 HESX1Q9UBX0 185 aa14.52□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PTPN22Q9Y2R2 807 aa14.52□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 SMCO2A6NFE2 343 aa14.52□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PDE6BP35913 854 aa14.52□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 DIS3L2Q8IYB7 885 aaKnown RBP14.52□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 MAP3K7O43318 606 aa14.52□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 BAG6P46379 1132 aa14.52□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PHEXP78562 749 aa14.52□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 B4GALNT4Q76KP1 1039 aa14.52□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PPM1KQ8N3J5 372 aa14.52□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 DBNDD2Q9BQY9 259 aa14.52□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 DDX41Q9UJV9 622 aaKnown RBP14.52□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 TNRQ92752 1358 aa14.52□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 ADCY8P40145 1251 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 POLA2Q14181 598 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 NONOQ15233 471 aaKnown RBP eCLIP14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 C7orf31Q8N865 590 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 ANLNQ9NQW6 1124 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 MYO18AQ92614 2054 aaKnown RBP14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 ZNF202O95125 648 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 TMEM191BP0C7N4 346 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 IQCB1Q15051 598 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 GPBP1Q86WP2 473 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 ATP6V0A1Q93050 837 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 CARD6Q9BX69 1037 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PARP2Q9UGN5 583 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 INPP5FQ9Y2H2 1132 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 TTC41PQ6P2S7 1318 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 ZNF532Q9HCE3 1301 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 RNMTO43148 476 aaKnown RBP14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 DMP1Q13316 513 aaPredicted RBP14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 IFNLR1Q8IU57 520 aaPredicted RBP14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 CCDC13Q8IYE1 715 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 MRPL50Q8N5N7 158 aaKnown RBP14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 CLRN2A0PK11 232 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PIK3CAP42336 1068 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 COG7P83436 770 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 GDAP1Q8TB36 358 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 CPSF3Q9UKF6 684 aaKnown RBP14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 TNNQ9UQP3 1299 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 KDRP35968 1356 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 NVLO15381 856 aaKnown RBP14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 XRCC5P13010 732 aaKnown RBP14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 NPR1P16066 1061 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 CEP85Q6P2H3 762 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 TMCO5AQ8N6Q1 288 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 HELLSQ9NRZ9 838 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PCDHA12Q9UN75 941 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 DBN1Q16643 649 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 SUPT20HQ8NEM7 779 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PLCB1Q9NQ66 1216 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 RTEL1Q9NZ71 1219 aa14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 SEPT9Q9UHD8 586 aaPredicted RBP14.51□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 ARHGAP24Q8N264 748 aa14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 AS3MTQ9HBK9 375 aa14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 KIF11P52732 1056 aa14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 MTX1Q13505 466 aa14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 ZNF790Q6PG37 636 aa14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 RNF10Q8N5U6 811 aaKnown RBP14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 SDR42E1Q8WUS8 393 aa14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 BUB1O43683 1085 aa14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 RPS6KB1P23443 525 aa14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 UBXN2AP68543 259 aa14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 FAM149B1Q96BN6 582 aa14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 TEKT2Q9UIF3 430 aa14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 STX2P32856 288 aa14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 CYP4A11Q02928 519 aa14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 ZBED2Q9BTP6 218 aa14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 PFDN6O15212 129 aa14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 GOLGA8HP0CJ92 632 aa14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 STAT1P42224 750 aa14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 RAB20Q9NX57 234 aa14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 FAM8A1Q9UBU6 413 aa14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 H7C0C1 242 aa14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 KCNK3O14649 394 aa14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 ATP5OP48047 213 aa14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 IFIH1Q9BYX4 1025 aaKnown RBP14.5□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 POSTNQ15063 836 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 NAA35Q5VZE5 725 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 C19orf44Q9H6X5 657 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 CACNA1FO60840 1977 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 SERPINB6P35237 376 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 HSP90AA5PQ58FG0 334 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 ANGPTL8Q6UXH0 198 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 TMEM87BQ96K49 555 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 CABS1Q96KC9 395 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 MAP3K5Q99683 1374 aa14.49□□□□□ -0.09
NPHP3-ACAD11-201ENST00000471702 CERKLQ49MI3 558 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms