RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 NFKBIAP25963 317 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 BRAPQ7Z569 592 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 POMGNT1Q8WZA1 660 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 EPSTI1Q96J88 318 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 DOLKQ9UPQ8 538 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 NEMFO60524 1076 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 TTLL1O95922 423 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 ACTN1P12814 892 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 CALCOCO2Q13137 446 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 DIXDC1Q155Q3 683 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 RUFY4Q6ZNE9 571 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 PNMA8AQ86V59 439 aaPredicted RBP9.47□□□□□ -0.89
CD47-204ENST00000471694 GPR161Q8N6U8 529 aaKnown RBP9.47□□□□□ -0.89
CD47-204ENST00000471694 CDHR1Q96JP9 859 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 MTRQ99707 1265 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 TACC3Q9Y6A5 838 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 COA1Q9GZY4 146 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 RSPH6AQ9H0K4 717 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 BABAM1Q9NWV8 329 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 PI4KBQ9UBF8 816 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 ZSCAN22P10073 491 aaPredicted RBP9.47□□□□□ -0.89
CD47-204ENST00000471694 ACRBPQ8NEB7 543 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 PHACTR3Q96KR7 559 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 NT5C3AQ9H0P0 336 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 PPME1Q9Y570 386 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 NEO1Q92859 1461 aa9.47□□□□□ -0.89
CD47-204ENST00000471694 FCER1AP12319 257 aa9.46□□□□□ -0.89
CD47-204ENST00000471694 NNMTP40261 264 aa9.46□□□□□ -0.89
CD47-204ENST00000471694 MTERF2Q49AM1 385 aa9.46□□□□□ -0.89
CD47-204ENST00000471694 UBL4BQ8N7F7 174 aa9.46□□□□□ -0.89
CD47-204ENST00000471694 DHX36Q9H2U1 1008 aaKnown RBP9.46□□□□□ -0.89
CD47-204ENST00000471694 KCNK9Q9NPC2 374 aa9.46□□□□□ -0.89
CD47-204ENST00000471694 MTRF1LQ9UGC7 380 aaKnown RBP9.46□□□□□ -0.89
CD47-204ENST00000471694 ZNF233A6NK53 670 aa9.46□□□□□ -0.89
CD47-204ENST00000471694 BMP3P12645 472 aa9.46□□□□□ -0.89
CD47-204ENST00000471694 ERCC3P19447 782 aa9.46□□□□□ -0.89
CD47-204ENST00000471694 EPHB1P54762 984 aa9.46□□□□□ -0.89
CD47-204ENST00000471694 TSPYL6Q8N831 410 aa9.46□□□□□ -0.89
CD47-204ENST00000471694 ZSCAN10Q96SZ4 725 aaPredicted RBP9.46□□□□□ -0.89
CD47-204ENST00000471694 GREM2Q9H772 168 aa9.46□□□□□ -0.89
CD47-204ENST00000471694 ZSWIM4Q9H7M6 989 aa9.46□□□□□ -0.89
CD47-204ENST00000471694 KDM5CP41229 1560 aa9.46□□□□□ -0.89
CD47-204ENST00000471694 OSTNP61366 133 aa9.46□□□□□ -0.89
CD47-204ENST00000471694 SYDE2Q5VT97 1194 aa9.46□□□□□ -0.89
CD47-204ENST00000471694 BRINP3Q76B58 766 aa9.46□□□□□ -0.89
CD47-204ENST00000471694 RUFY3Q7L099 469 aa9.46□□□□□ -0.89
CD47-204ENST00000471694 CATSPER4Q7RTX7 472 aa9.46□□□□□ -0.89
CD47-204ENST00000471694 CCDC110Q8TBZ0 833 aa9.46□□□□□ -0.89
CD47-204ENST00000471694 MIS12Q9H081 205 aa9.46□□□□□ -0.89
CD47-204ENST00000471694 C1orf112Q9NSG2 853 aa9.46□□□□□ -0.89
CD47-204ENST00000471694 PALD1Q9ULE6 856 aa9.46□□□□□ -0.89
CD47-204ENST00000471694 USP17L2Q6R6M4 530 aa9.46□□□□□ -0.9
CD47-204ENST00000471694 NLRP4Q96MN2 994 aa9.46□□□□□ -0.9
CD47-204ENST00000471694 MAPK8IP1Q9UQF2 711 aa9.46□□□□□ -0.9
CD47-204ENST00000471694 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.46□□□□□ -0.9
CD47-204ENST00000471694 A6NJR5 290 aa9.46□□□□□ -0.9
CD47-204ENST00000471694 NEURL1BA8MQ27 555 aa9.46□□□□□ -0.9
CD47-204ENST00000471694 CIITAP33076 1130 aa9.46□□□□□ -0.9
CD47-204ENST00000471694 LRCH2Q5VUJ6 765 aa9.46□□□□□ -0.9
CD47-204ENST00000471694 TWF2Q6IBS0 349 aaKnown RBP9.46□□□□□ -0.9
CD47-204ENST00000471694 ZNF365Q70YC5 407 aa9.46□□□□□ -0.9
CD47-204ENST00000471694 G2E3Q7L622 706 aa9.46□□□□□ -0.9
CD47-204ENST00000471694 NDUFAF2Q8N183 169 aa9.46□□□□□ -0.9
CD47-204ENST00000471694 NSRP1Q9H0G5 558 aaKnown RBP9.46□□□□□ -0.9
CD47-204ENST00000471694 RRAGCQ9HB90 399 aa9.46□□□□□ -0.9
CD47-204ENST00000471694 SPATA31A6Q5VVP1 1343 aa9.46□□□□□ -0.9
CD47-204ENST00000471694 CLGNO14967 610 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 PCCAP05165 728 aaPredicted RBP9.45□□□□□ -0.9
CD47-204ENST00000471694 PSAPP07602 524 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 SRGAP2CP0DJJ0 459 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 ADRA2BP18089 450 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 PPP2R5BQ15173 497 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 ATRIPQ8WXE1 791 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 OLA1Q9NTK5 396 aaKnown RBP9.45□□□□□ -0.9
CD47-204ENST00000471694 GTPBP6O43824 516 aaPredicted RBP9.45□□□□□ -0.9
CD47-204ENST00000471694 CHRNA5P30532 468 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 AMNQ9BXJ7 453 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 CTTNBP2NLQ9P2B4 639 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 NLRP1Q9C000 1473 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 CCDC6Q16204 474 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 PARK7Q99497 189 aaKnown RBP9.45□□□□□ -0.9
CD47-204ENST00000471694 TTC1Q99614 292 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 FAM107BQ9H098 131 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 FARP1Q9Y4F1 1045 aaPredicted RBP9.45□□□□□ -0.9
CD47-204ENST00000471694 USP17L5A8MUK1 530 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 KLRF2D3W0D1 207 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 HOXB7P09629 217 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 ZNF165P49910 485 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 C20orf194Q5TEA3 1177 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 CEP85Q6P2H3 762 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 MICALCLQ6ZW33 695 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 TAOK1Q7L7X3 1001 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 CAPZA3Q96KX2 299 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 FAM184BQ9ULE4 1060 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 CEP170Q5SW79 1584 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 FCGRTP55899 365 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 GNG11P61952 73 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 MYO1EQ12965 1108 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 TSGA10Q9BZW7 698 aa9.45□□□□□ -0.9
CD47-204ENST00000471694 DYRK4Q9NR20 520 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms