RNA–Protein interactions for RNA: ENST00000471259.1

MRPL40-203, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-203ENST00000471259 ZBED4O75132 1171 aa13.59□□□□□ -0.23
MRPL40-203ENST00000471259 HMMRO75330 724 aa13.59□□□□□ -0.23
MRPL40-203ENST00000471259 C6orf222P0C671 652 aaPredicted RBP13.59□□□□□ -0.23
MRPL40-203ENST00000471259 EEF2P13639 858 aaKnown RBP13.59□□□□□ -0.23
MRPL40-203ENST00000471259 AKR1B1P15121 316 aa13.59□□□□□ -0.23
MRPL40-203ENST00000471259 ITGB8P26012 769 aa13.59□□□□□ -0.23
MRPL40-203ENST00000471259 CDK8P49336 464 aa13.59□□□□□ -0.23
MRPL40-203ENST00000471259 EPHB4P54760 987 aa13.59□□□□□ -0.23
MRPL40-203ENST00000471259 KCNA10Q16322 511 aa13.59□□□□□ -0.23
MRPL40-203ENST00000471259 AAK1Q2M2I8 961 aa13.59□□□□□ -0.23
MRPL40-203ENST00000471259 MAMDC4Q6UXC1 1216 aa13.59□□□□□ -0.23
MRPL40-203ENST00000471259 KLHDC9Q8NEP7 349 aa13.59□□□□□ -0.23
MRPL40-203ENST00000471259 KIF1BPQ96EK5 621 aa13.59□□□□□ -0.23
MRPL40-203ENST00000471259 DNAJC2Q99543 621 aaKnown RBP13.59□□□□□ -0.23
MRPL40-203ENST00000471259 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.59□□□□□ -0.235e-7■■■■□ 24.9
MRPL40-203ENST00000471259 C1orf115Q9H7X2 142 aa13.59□□□□□ -0.23
MRPL40-203ENST00000471259 ZNF287Q9HBT7 754 aa13.59□□□□□ -0.23
MRPL40-203ENST00000471259 ZHX1Q9UKY1 873 aaPredicted RBP13.59□□□□□ -0.23
MRPL40-203ENST00000471259 SYNRGQ9UMZ2 1314 aa13.59□□□□□ -0.23
MRPL40-203ENST00000471259 CCER2I3L3R5 266 aa13.58□□□□□ -0.24
MRPL40-203ENST00000471259 ARVCFO00192 962 aa13.58□□□□□ -0.24
MRPL40-203ENST00000471259 CABYRO75952 493 aa13.58□□□□□ -0.24
MRPL40-203ENST00000471259 FDX1P10109 184 aa13.58□□□□□ -0.24
MRPL40-203ENST00000471259 MS4A1P11836 297 aa13.58□□□□□ -0.24
MRPL40-203ENST00000471259 C12orf60Q5U649 245 aa13.58□□□□□ -0.24
MRPL40-203ENST00000471259 SNRNP48Q6IEG0 339 aaKnown RBP13.58□□□□□ -0.24
MRPL40-203ENST00000471259 CEP85Q6P2H3 762 aa13.58□□□□□ -0.24
MRPL40-203ENST00000471259 C16orf86Q6ZW13 317 aa13.58□□□□□ -0.24
MRPL40-203ENST00000471259 LCORLQ8N3X6 602 aa13.58□□□□□ -0.24
MRPL40-203ENST00000471259 PRPF38AQ8NAV1 312 aaKnown RBP13.58□□□□□ -0.24
MRPL40-203ENST00000471259 RHPN1Q8TCX5 695 aa13.58□□□□□ -0.24
MRPL40-203ENST00000471259 ASB2Q96Q27 587 aa13.58□□□□□ -0.24
MRPL40-203ENST00000471259 SLF1Q9BQI6 1058 aa13.58□□□□□ -0.24
MRPL40-203ENST00000471259 SLC28A3Q9HAS3 691 aa13.58□□□□□ -0.24
MRPL40-203ENST00000471259 TBX21Q9UL17 535 aa13.58□□□□□ -0.24
MRPL40-203ENST00000471259 ZNF214Q9UL59 606 aaPredicted RBP13.58□□□□□ -0.24
MRPL40-203ENST00000471259 TNNQ9UQP3 1299 aa13.58□□□□□ -0.24
MRPL40-203ENST00000471259 EXOC6BQ9Y2D4 811 aa13.58□□□□□ -0.24
MRPL40-203ENST00000471259 ZEB2O60315 1214 aa13.57□□□□□ -0.24
MRPL40-203ENST00000471259 ASGR1P07306 291 aa13.57□□□□□ -0.24
MRPL40-203ENST00000471259 ACVR2BQ13705 512 aa13.57□□□□□ -0.24
MRPL40-203ENST00000471259 GNASQ5JWF2 1037 aa13.57□□□□□ -0.24
MRPL40-203ENST00000471259 KIAA1755Q5JYT7 1200 aa13.57□□□□□ -0.24
MRPL40-203ENST00000471259 TMEM240Q5SV17 173 aa13.57□□□□□ -0.24
MRPL40-203ENST00000471259 SIAH1Q8IUQ4 282 aa13.57□□□□□ -0.24
MRPL40-203ENST00000471259 ANKRD35Q8N283 1001 aa13.57□□□□□ -0.24
MRPL40-203ENST00000471259 PPM1EQ8WY54 764 aa13.57□□□□□ -0.24
MRPL40-203ENST00000471259 DYNLL2Q96FJ2 89 aa13.57□□□□□ -0.24
MRPL40-203ENST00000471259 PBX4Q9BYU1 374 aa13.57□□□□□ -0.24
MRPL40-203ENST00000471259 CHMP4BQ9H444 224 aaKnown RBP13.57□□□□□ -0.24
MRPL40-203ENST00000471259 ARMT1Q9H993 441 aa13.57□□□□□ -0.24
MRPL40-203ENST00000471259 ARPP21Q9UBL0 812 aaPredicted RBP13.57□□□□□ -0.24
MRPL40-203ENST00000471259 VCANP13611 3396 aa13.56□□□□□ -0.24
MRPL40-203ENST00000471259 COL11A1P12107 1806 aaPredicted RBP13.56□□□□□ -0.24
MRPL40-203ENST00000471259 TCRBV5S4A2TA0A5A2 114 aa13.56□□□□□ -0.24
MRPL40-203ENST00000471259 USP17L12C9JPN9 530 aa13.56□□□□□ -0.24
MRPL40-203ENST00000471259 USP17L21D6R901 530 aa13.56□□□□□ -0.24
MRPL40-203ENST00000471259 ATP2A1O14983 1001 aa13.56□□□□□ -0.24
MRPL40-203ENST00000471259 MBD4O95243 580 aa13.56□□□□□ -0.24
MRPL40-203ENST00000471259 TAL1P17542 331 aaPredicted RBP13.56□□□□□ -0.24
MRPL40-203ENST00000471259 ADD2P35612 726 aa13.56□□□□□ -0.24
MRPL40-203ENST00000471259 CDK7P50613 346 aa13.56□□□□□ -0.24
MRPL40-203ENST00000471259 GJA9P57773 515 aa13.56□□□□□ -0.24
MRPL40-203ENST00000471259 UBE3CQ15386 1083 aa13.56□□□□□ -0.24
MRPL40-203ENST00000471259 FAM83BQ5T0W9 1011 aa13.56□□□□□ -0.24
MRPL40-203ENST00000471259 RPUSD2Q8IZ73 545 aaKnown RBP13.56□□□□□ -0.24
MRPL40-203ENST00000471259 CHST13Q8NET6 341 aa13.56□□□□□ -0.24
MRPL40-203ENST00000471259 MKNK2Q9HBH9 465 aa13.56□□□□□ -0.24
MRPL40-203ENST00000471259 IL1RAPL2Q9NP60 686 aa13.56□□□□□ -0.24
MRPL40-203ENST00000471259 PAG1Q9NWQ8 432 aa13.56□□□□□ -0.24
MRPL40-203ENST00000471259 SYNPO2Q9UMS6 1093 aa13.56□□□□□ -0.24
MRPL40-203ENST00000471259 SLC4A4Q9Y6R1 1079 aa13.56□□□□□ -0.24
MRPL40-203ENST00000471259 PARP14Q460N5 1801 aa13.55□□□□□ -0.24
MRPL40-203ENST00000471259 RAB11FIP3O75154 756 aa13.55□□□□□ -0.24
MRPL40-203ENST00000471259 SNAI1O95863 264 aaPredicted RBP13.55□□□□□ -0.24
MRPL40-203ENST00000471259 FGBP02675 491 aa13.55□□□□□ -0.24
MRPL40-203ENST00000471259 CYP2D6P10635 497 aa13.55□□□□□ -0.24
MRPL40-203ENST00000471259 CSF2RAP15509 400 aa13.55□□□□□ -0.24
MRPL40-203ENST00000471259 IGFBP4P22692 258 aa13.55□□□□□ -0.24
MRPL40-203ENST00000471259 OAZ1P54368 228 aa13.55□□□□□ -0.24
MRPL40-203ENST00000471259 CCSAPQ6IQ19 270 aaPredicted RBP13.55□□□□□ -0.24
MRPL40-203ENST00000471259 ZNF365Q70YC5 407 aa13.55□□□□□ -0.24
MRPL40-203ENST00000471259 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.55□□□□□ -0.24
MRPL40-203ENST00000471259 RPAP2Q8IXW5 612 aaPredicted RBP13.55□□□□□ -0.24
MRPL40-203ENST00000471259 USP38Q8NB14 1042 aa13.55□□□□□ -0.24
MRPL40-203ENST00000471259 REPS2Q8NFH8 660 aa13.55□□□□□ -0.24
MRPL40-203ENST00000471259 HERVK_113Q902F9 699 aa13.55□□□□□ -0.24
MRPL40-203ENST00000471259 UHRF1Q96T88 793 aaPredicted RBP13.55□□□□□ -0.24
MRPL40-203ENST00000471259 C1QTNF1Q9BXJ1 281 aa13.55□□□□□ -0.24
MRPL40-203ENST00000471259 UPF3AQ9H1J1 476 aaKnown RBP13.55□□□□□ -0.24
MRPL40-203ENST00000471259 PRDM12Q9H4Q4 367 aa13.55□□□□□ -0.24
MRPL40-203ENST00000471259 IL23AQ9NPF7 189 aa13.55□□□□□ -0.24
MRPL40-203ENST00000471259 FBXO28Q9NVF7 368 aa13.55□□□□□ -0.24
MRPL40-203ENST00000471259 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.55□□□□□ -0.24
MRPL40-203ENST00000471259 NYAP2Q9P242 653 aa13.55□□□□□ -0.24
MRPL40-203ENST00000471259 TTC28Q96AY4 2481 aa13.54□□□□□ -0.24
MRPL40-203ENST00000471259 DNAJC25-GNG10A0A024R161 153 aa13.54□□□□□ -0.24
MRPL40-203ENST00000471259 CCDC144BQ3MJ40 725 aa13.54□□□□□ -0.24
MRPL40-203ENST00000471259 RASIP1Q5U651 963 aa13.54□□□□□ -0.24
MRPL40-203ENST00000471259 CLEC10AQ8IUN9 316 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms