RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 KIFC2Q96AC6 838 aa17.83■□□□□ 0.44
ABCF3-208ENST00000471226 MROH8Q9H579 483 aa17.83■□□□□ 0.44
ABCF3-208ENST00000471226 SLC38A10Q9HBR0 1119 aa17.83■□□□□ 0.44
ABCF3-208ENST00000471226 PLXNA1Q9UIW2 1896 aa17.82■□□□□ 0.44
ABCF3-208ENST00000471226 SLC15A5A6NIM6 579 aa17.82■□□□□ 0.44
ABCF3-208ENST00000471226 ZBED4O75132 1171 aa17.82■□□□□ 0.44
ABCF3-208ENST00000471226 SLC25A27O95847 323 aa17.82■□□□□ 0.44
ABCF3-208ENST00000471226 ERCC3P19447 782 aa17.82■□□□□ 0.44
ABCF3-208ENST00000471226 STAT3P40763 770 aa17.82■□□□□ 0.44
ABCF3-208ENST00000471226 BTNL9Q6UXG8 535 aa17.82■□□□□ 0.44
ABCF3-208ENST00000471226 RALYLQ86SE5 291 aaKnown RBP17.82■□□□□ 0.44
ABCF3-208ENST00000471226 PNMA1Q8ND90 353 aa17.82■□□□□ 0.44
ABCF3-208ENST00000471226 CHMP4CQ96CF2 233 aa17.82■□□□□ 0.44
ABCF3-208ENST00000471226 UBAC1Q9BSL1 405 aa17.82■□□□□ 0.44
ABCF3-208ENST00000471226 MTMR7Q9Y216 660 aa17.82■□□□□ 0.44
ABCF3-208ENST00000471226 STRNO43815 780 aa17.81■□□□□ 0.44
ABCF3-208ENST00000471226 XRCC5P13010 732 aaKnown RBP17.81■□□□□ 0.44
ABCF3-208ENST00000471226 GRB14Q14449 540 aa17.81■□□□□ 0.44
ABCF3-208ENST00000471226 WDR78Q5VTH9 848 aa17.81■□□□□ 0.44
ABCF3-208ENST00000471226 MB21D2Q8IYB1 491 aaPredicted RBP17.81■□□□□ 0.44
ABCF3-208ENST00000471226 KAT14Q9H8E8 782 aa17.81■□□□□ 0.44
ABCF3-208ENST00000471226 CWC22Q9HCG8 908 aaKnown RBP17.81■□□□□ 0.44
ABCF3-208ENST00000471226 IVNS1ABPQ9Y6Y0 642 aa17.81■□□□□ 0.44
ABCF3-208ENST00000471226 ELNP15502 786 aa17.8■□□□□ 0.44
ABCF3-208ENST00000471226 CYP2B6P20813 491 aa17.8■□□□□ 0.44
ABCF3-208ENST00000471226 COPB2P35606 906 aa17.8■□□□□ 0.44
ABCF3-208ENST00000471226 RGS2P41220 211 aa17.8■□□□□ 0.44
ABCF3-208ENST00000471226 OAZ1P54368 228 aa17.8■□□□□ 0.44
ABCF3-208ENST00000471226 ANTXR2P58335 489 aa17.8■□□□□ 0.44
ABCF3-208ENST00000471226 ZNF543Q08ER8 600 aa17.8■□□□□ 0.44
ABCF3-208ENST00000471226 MAP2K5Q13163 448 aa17.8■□□□□ 0.44
ABCF3-208ENST00000471226 CCDC96Q2M329 555 aa17.8■□□□□ 0.44
ABCF3-208ENST00000471226 TTBK2Q6IQ55 1244 aa17.8■□□□□ 0.44
ABCF3-208ENST00000471226 NCAPG2Q86XI2 1143 aa17.8■□□□□ 0.44
ABCF3-208ENST00000471226 TEX13BQ9BXU2 312 aa17.8■□□□□ 0.44
ABCF3-208ENST00000471226 PRR12Q9ULL5 1215 aa17.8■□□□□ 0.44
ABCF3-208ENST00000471226 ISY1Q9ULR0 285 aaKnown RBP17.8■□□□□ 0.44
ABCF3-208ENST00000471226 MYH6P13533 1939 aa17.8■□□□□ 0.44
ABCF3-208ENST00000471226 HOXC6P09630 235 aa17.79■□□□□ 0.44
ABCF3-208ENST00000471226 IKQ13123 557 aaPredicted RBP17.79■□□□□ 0.44
ABCF3-208ENST00000471226 TSGA10IPQ3SY00 556 aa17.79■□□□□ 0.44
ABCF3-208ENST00000471226 IFIT1BQ5T764 474 aaKnown RBP17.79■□□□□ 0.44
ABCF3-208ENST00000471226 RNF20Q5VTR2 975 aa17.79■□□□□ 0.44
ABCF3-208ENST00000471226 SNRNP48Q6IEG0 339 aaKnown RBP17.79■□□□□ 0.44
ABCF3-208ENST00000471226 ABRAQ8N0Z2 381 aa17.79■□□□□ 0.44
ABCF3-208ENST00000471226 RAVER2Q9HCJ3 691 aaKnown RBP17.79■□□□□ 0.44
ABCF3-208ENST00000471226 RIPK3Q9Y572 518 aa17.79■□□□□ 0.44
ABCF3-208ENST00000471226 ZNF536O15090 1300 aa17.78■□□□□ 0.44
ABCF3-208ENST00000471226 FRMPD2Q68DX3 1309 aaPredicted RBP17.78■□□□□ 0.44
ABCF3-208ENST00000471226 IFIT3O14879 490 aaKnown RBP17.78■□□□□ 0.44
ABCF3-208ENST00000471226 UBXN2AP68543 259 aa17.78■□□□□ 0.44
ABCF3-208ENST00000471226 GPATCH4Q5T3I0 446 aaKnown RBP17.78■□□□□ 0.44
ABCF3-208ENST00000471226 CHST3Q7LGC8 479 aa17.78■□□□□ 0.44
ABCF3-208ENST00000471226 CPXCR1Q8N123 301 aa17.78■□□□□ 0.44
ABCF3-208ENST00000471226 IGDCC4Q8TDY8 1250 aa17.78■□□□□ 0.44
ABCF3-208ENST00000471226 TRIB2Q92519 343 aa17.78■□□□□ 0.44
ABCF3-208ENST00000471226 APBA2Q99767 749 aa17.78■□□□□ 0.44
ABCF3-208ENST00000471226 MTA3Q9BTC8 594 aa17.78■□□□□ 0.44
ABCF3-208ENST00000471226 GPCPD1Q9NPB8 672 aa17.78■□□□□ 0.44
ABCF3-208ENST00000471226 CTDP1Q9Y5B0 961 aaPredicted RBP17.78■□□□□ 0.44
ABCF3-208ENST00000471226 HMGCRP04035 888 aa17.77■□□□□ 0.44
ABCF3-208ENST00000471226 INHAP05111 366 aa17.77■□□□□ 0.44
ABCF3-208ENST00000471226 ADORA2AP29274 412 aa17.77■□□□□ 0.44
ABCF3-208ENST00000471226 SLC16A2P36021 539 aa17.77■□□□□ 0.44
ABCF3-208ENST00000471226 RGS19P49795 217 aa17.77■□□□□ 0.44
ABCF3-208ENST00000471226 SOX10P56693 466 aa17.77■□□□□ 0.44
ABCF3-208ENST00000471226 COL9A3Q14050 684 aaPredicted RBP17.77■□□□□ 0.44
ABCF3-208ENST00000471226 MTFR1Q15390 333 aa17.77■□□□□ 0.44
ABCF3-208ENST00000471226 SYDE2Q5VT97 1194 aa17.77■□□□□ 0.44
ABCF3-208ENST00000471226 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.77■□□□□ 0.44
ABCF3-208ENST00000471226 TRMT44Q8IYL2 757 aaKnown RBP17.77■□□□□ 0.44
ABCF3-208ENST00000471226 RASEFQ8IZ41 740 aa17.77■□□□□ 0.44
ABCF3-208ENST00000471226 NPLOC4Q8TAT6 608 aa17.77■□□□□ 0.44
ABCF3-208ENST00000471226 KCNB2Q92953 911 aa17.77■□□□□ 0.44
ABCF3-208ENST00000471226 RANBP17Q9H2T7 1088 aaKnown RBP17.77■□□□□ 0.44
ABCF3-208ENST00000471226 SENP2Q9HC62 589 aa17.77■□□□□ 0.44
ABCF3-208ENST00000471226 BIN2Q9UBW5 565 aaPredicted RBP17.77■□□□□ 0.44
ABCF3-208ENST00000471226 ERICH2A1L162 156 aa17.76■□□□□ 0.43
ABCF3-208ENST00000471226 EPB41L2O43491 1005 aaKnown RBP17.76■□□□□ 0.43
ABCF3-208ENST00000471226 REC8O95072 547 aa17.76■□□□□ 0.43
ABCF3-208ENST00000471226 IGHA2P01877 340 aa17.76■□□□□ 0.43
ABCF3-208ENST00000471226 FCER1AP12319 257 aa17.76■□□□□ 0.43
ABCF3-208ENST00000471226 MCM5P33992 734 aa17.76■□□□□ 0.43
ABCF3-208ENST00000471226 WTAPQ15007 396 aa17.76■□□□□ 0.43
ABCF3-208ENST00000471226 SART3Q15020 963 aaKnown RBP17.76■□□□□ 0.43
ABCF3-208ENST00000471226 CCL14Q16627 93 aa17.76■□□□□ 0.43
ABCF3-208ENST00000471226 POTEFA5A3E0 1075 aa17.75■□□□□ 0.43
ABCF3-208ENST00000471226 PRC1O43663 620 aa17.75■□□□□ 0.43
ABCF3-208ENST00000471226 COBLO75128 1261 aa17.75■□□□□ 0.43
ABCF3-208ENST00000471226 GOLGA8HP0CJ92 632 aa17.75■□□□□ 0.43
ABCF3-208ENST00000471226 CCL5P13501 91 aa17.75■□□□□ 0.43
ABCF3-208ENST00000471226 HSPA4P34932 840 aa17.75■□□□□ 0.43
ABCF3-208ENST00000471226 SNAP25P60880 206 aa17.75■□□□□ 0.43
ABCF3-208ENST00000471226 ASPRV1Q53RT3 343 aa17.75■□□□□ 0.43
ABCF3-208ENST00000471226 TMEM67Q5HYA8 995 aa17.75■□□□□ 0.43
ABCF3-208ENST00000471226 MAP3K21Q5TCX8 1036 aa17.75■□□□□ 0.43
ABCF3-208ENST00000471226 CHST13Q8NET6 341 aa17.75■□□□□ 0.43
ABCF3-208ENST00000471226 AGBL1Q96MI9 1066 aa17.75■□□□□ 0.43
ABCF3-208ENST00000471226 MMP19Q99542 508 aa17.75■□□□□ 0.43
ABCF3-208ENST00000471226 TMEM106CQ9BVX2 250 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms