RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 CYP2D6P10635 497 aa10.6□□□□□ -0.71
PTPRE-207ENST00000471218 BCRP11274 1271 aa10.6□□□□□ -0.71
PTPRE-207ENST00000471218 XBP1P17861 261 aa10.6□□□□□ -0.71
PTPRE-207ENST00000471218 PLCD1P51178 756 aa10.6□□□□□ -0.71
PTPRE-207ENST00000471218 TFAP4Q01664 338 aa10.6□□□□□ -0.71
PTPRE-207ENST00000471218 TCP10Q12799 353 aa10.6□□□□□ -0.71
PTPRE-207ENST00000471218 STK3Q13188 491 aa10.6□□□□□ -0.71
PTPRE-207ENST00000471218 MTFR1Q15390 333 aa10.6□□□□□ -0.71
PTPRE-207ENST00000471218 NTRK3Q16288 839 aa10.6□□□□□ -0.71
PTPRE-207ENST00000471218 PRRT2Q7Z6L0 340 aaPredicted RBP10.6□□□□□ -0.71
PTPRE-207ENST00000471218 MICU3Q86XE3 530 aa10.6□□□□□ -0.71
PTPRE-207ENST00000471218 TEX2Q8IWB9 1127 aa10.6□□□□□ -0.71
PTPRE-207ENST00000471218 ZSCAN29Q8IWY8 852 aaPredicted RBP10.6□□□□□ -0.71
PTPRE-207ENST00000471218 FBXO18Q8NFZ0 1043 aa10.6□□□□□ -0.71
PTPRE-207ENST00000471218 CTCFLQ8NI51 663 aaPredicted RBP10.6□□□□□ -0.71
PTPRE-207ENST00000471218 U2AF1L4Q8WU68 220 aaKnown RBP10.6□□□□□ -0.71
PTPRE-207ENST00000471218 SCAND2PQ9GZW5 306 aaPredicted RBP10.6□□□□□ -0.71
PTPRE-207ENST00000471218 KAT14Q9H8E8 782 aa10.6□□□□□ -0.71
PTPRE-207ENST00000471218 ZHX2Q9Y6X8 837 aa10.6□□□□□ -0.71
PTPRE-207ENST00000471218 OTOFQ9HC10 1997 aa10.59□□□□□ -0.71
PTPRE-207ENST00000471218 IGKV6D-41A0A0C4DH26 115 aa10.59□□□□□ -0.71
PTPRE-207ENST00000471218 TNPO2O14787 897 aaKnown RBP10.59□□□□□ -0.71
PTPRE-207ENST00000471218 TBC1D12O60347 775 aa10.59□□□□□ -0.71
PTPRE-207ENST00000471218 JAK2O60674 1132 aa10.59□□□□□ -0.71
PTPRE-207ENST00000471218 FARP2O94887 1054 aaPredicted RBP10.59□□□□□ -0.71
PTPRE-207ENST00000471218 TOP1P11387 765 aaKnown RBP10.59□□□□□ -0.71
PTPRE-207ENST00000471218 CCT2P78371 535 aaKnown RBP10.59□□□□□ -0.71
PTPRE-207ENST00000471218 MAP3K10Q02779 954 aa10.59□□□□□ -0.71
PTPRE-207ENST00000471218 SSRP1Q08945 709 aaKnown RBP10.59□□□□□ -0.71
PTPRE-207ENST00000471218 PKP1Q13835 747 aa10.59□□□□□ -0.71
PTPRE-207ENST00000471218 RCSD1Q6JBY9 416 aa10.59□□□□□ -0.71
PTPRE-207ENST00000471218 UBE2Q1Q7Z7E8 422 aa10.59□□□□□ -0.71
PTPRE-207ENST00000471218 ANKLE1Q8NAG6 615 aa10.59□□□□□ -0.71
PTPRE-207ENST00000471218 LARP6Q9BRS8 491 aaKnown RBP10.59□□□□□ -0.71
PTPRE-207ENST00000471218 NCOA5Q9HCD5 579 aaKnown RBP10.59□□□□□ -0.71
PTPRE-207ENST00000471218 DDX4Q9NQI0 724 aaKnown RBP10.59□□□□□ -0.71
PTPRE-207ENST00000471218 GPHNQ9NQX3 736 aaPredicted RBP10.59□□□□□ -0.71
PTPRE-207ENST00000471218 FAM217BQ9NTX9 383 aaPredicted RBP10.59□□□□□ -0.71
PTPRE-207ENST00000471218 FAM198AQ9UFP1 575 aa10.59□□□□□ -0.71
PTPRE-207ENST00000471218 NAP1L2Q9ULW6 460 aaPredicted RBP10.59□□□□□ -0.71
PTPRE-207ENST00000471218 ADGRA2Q96PE1 1338 aa10.58□□□□□ -0.71
PTPRE-207ENST00000471218 BAZ2AQ9UIF9 1905 aaKnown RBP10.58□□□□□ -0.72
PTPRE-207ENST00000471218 CDK5RAP2Q96SN8 1893 aa10.58□□□□□ -0.72
PTPRE-207ENST00000471218 VPS37CA5D8V6 355 aaPredicted RBP10.58□□□□□ -0.72
PTPRE-207ENST00000471218 hCG_1984214I3L0E3 225 aa10.58□□□□□ -0.72
PTPRE-207ENST00000471218 PRDM1O75626 825 aa10.58□□□□□ -0.72
PTPRE-207ENST00000471218 FDPSP14324 419 aaKnown RBP10.58□□□□□ -0.72
PTPRE-207ENST00000471218 PTPRAP18433 802 aa10.58□□□□□ -0.72
PTPRE-207ENST00000471218 GCLCP48506 637 aaPredicted RBP10.58□□□□□ -0.72
PTPRE-207ENST00000471218 KRT85P78386 507 aa10.58□□□□□ -0.72
PTPRE-207ENST00000471218 AKAP17AQ02040 695 aaKnown RBP10.58□□□□□ -0.72
PTPRE-207ENST00000471218 PRKCZQ05513 592 aa10.58□□□□□ -0.72
PTPRE-207ENST00000471218 TRIM29Q14134 588 aa10.58□□□□□ -0.72
PTPRE-207ENST00000471218 KLHL40Q2TBA0 621 aa10.58□□□□□ -0.72
PTPRE-207ENST00000471218 GPR153Q6NV75 609 aa10.58□□□□□ -0.72
PTPRE-207ENST00000471218 TATDN1Q6P1N9 297 aa10.58□□□□□ -0.72
PTPRE-207ENST00000471218 TMTC3Q6ZXV5 915 aa10.58□□□□□ -0.72
PTPRE-207ENST00000471218 NECAB2Q7Z6G3 386 aa10.58□□□□□ -0.72
PTPRE-207ENST00000471218 CRACR2BQ8N4Y2 399 aaPredicted RBP10.58□□□□□ -0.72
PTPRE-207ENST00000471218 ZNF713Q8N859 430 aaPredicted RBP10.58□□□□□ -0.72
PTPRE-207ENST00000471218 PNMA1Q8ND90 353 aa10.58□□□□□ -0.72
PTPRE-207ENST00000471218 C8orf76Q96K31 380 aa10.58□□□□□ -0.72
PTPRE-207ENST00000471218 SAP30BPQ9UHR5 308 aaKnown RBP10.58□□□□□ -0.72
PTPRE-207ENST00000471218 CFAP45Q9UL16 551 aa10.58□□□□□ -0.72
PTPRE-207ENST00000471218 ISY1Q9ULR0 285 aaKnown RBP10.58□□□□□ -0.72
PTPRE-207ENST00000471218 AFG3L2Q9Y4W6 797 aa10.58□□□□□ -0.72
PTPRE-207ENST00000471218 MORC2Q9Y6X9 1032 aaPredicted RBP10.58□□□□□ -0.72
PTPRE-207ENST00000471218 RANBP2P49792 3224 aaKnown RBP10.58□□□□□ -0.72
PTPRE-207ENST00000471218 PHF20L1A8MW92 1017 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 PRPF3O43395 683 aaKnown RBP10.57□□□□□ -0.72
PTPRE-207ENST00000471218 TTLL1O95922 423 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 CDC27P30260 824 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 SHMT1P34896 483 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 ADD1P35611 737 aaKnown RBP10.57□□□□□ -0.72
PTPRE-207ENST00000471218 FLT3LGP49771 235 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 FUT2Q10981 343 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 PICALMQ13492 652 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 MOGSQ13724 837 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 GRM4Q14833 912 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 FAM110CQ1W6H9 321 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 ASPRV1Q53RT3 343 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 GALNT17Q6IS24 598 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 GPAT2Q6NUI2 795 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 GADL1Q6ZQY3 521 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 TMEM179Q6ZVK1 233 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 PROCA1Q8NCQ7 364 aaPredicted RBP10.57□□□□□ -0.72
PTPRE-207ENST00000471218 SHISA4Q96DD7 197 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 SPZ1Q9BXG8 430 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 TRIM34Q9BYJ4 488 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 KANSL2Q9H9L4 492 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 INCENPQ9NQS7 918 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 SH3GLB2Q9NR46 395 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 IL17RBQ9NRM6 502 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 MTMR4Q9NYA4 1195 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 AGTPBP1Q9UPW5 1226 aa10.57□□□□□ -0.72
PTPRE-207ENST00000471218 SNHG28P0DPA3 235 aa10.56□□□□□ -0.72
PTPRE-207ENST00000471218 CYP2C8P10632 490 aa10.56□□□□□ -0.72
PTPRE-207ENST00000471218 NCLP19338 710 aaKnown RBP10.56□□□□□ -0.72
PTPRE-207ENST00000471218 NFIAQ12857 509 aa10.56□□□□□ -0.72
PTPRE-207ENST00000471218 RESTQ13127 1097 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms