RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 CLTBP09497 229 aa10.83□□□□□ -0.68
SF3A1-206ENST00000471037 ZNF865P0CJ78 1059 aaPredicted RBP10.83□□□□□ -0.68
SF3A1-206ENST00000471037 AKR1A1P14550 325 aa10.83□□□□□ -0.68
SF3A1-206ENST00000471037 PDE4AP27815 886 aa10.83□□□□□ -0.68
SF3A1-206ENST00000471037 FAM83BQ5T0W9 1011 aa10.83□□□□□ -0.68
SF3A1-206ENST00000471037 ZSCAN25Q6NSZ9 544 aa10.83□□□□□ -0.68
SF3A1-206ENST00000471037 CTR9Q6PD62 1173 aa10.83□□□□□ -0.68
SF3A1-206ENST00000471037 MSL3Q8N5Y2 521 aaKnown RBP10.83□□□□□ -0.68
SF3A1-206ENST00000471037 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.83□□□□□ -0.68
SF3A1-206ENST00000471037 TTYH1Q9H313 450 aaPredicted RBP10.83□□□□□ -0.68
SF3A1-206ENST00000471037 SEMA6BQ9H3T3 888 aa10.83□□□□□ -0.68
SF3A1-206ENST00000471037 SLC4A4Q9Y6R1 1079 aa10.83□□□□□ -0.68
SF3A1-206ENST00000471037 MYH7P12883 1935 aa10.82□□□□□ -0.68
SF3A1-206ENST00000471037 PGK1P00558 417 aa10.82□□□□□ -0.68
SF3A1-206ENST00000471037 TAL1P17542 331 aaPredicted RBP10.82□□□□□ -0.68
SF3A1-206ENST00000471037 ITGB8P26012 769 aa10.82□□□□□ -0.68
SF3A1-206ENST00000471037 SAMD1Q6SPF0 538 aaPredicted RBP10.82□□□□□ -0.68
SF3A1-206ENST00000471037 MAMDC4Q6UXC1 1216 aa10.82□□□□□ -0.68
SF3A1-206ENST00000471037 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.82□□□□□ -0.68
SF3A1-206ENST00000471037 ANKRD33Q7Z3H0 272 aa10.82□□□□□ -0.68
SF3A1-206ENST00000471037 MAFAQ8NHW3 353 aaPredicted RBP10.82□□□□□ -0.68
SF3A1-206ENST00000471037 GPATCH3Q96I76 525 aa10.82□□□□□ -0.68
SF3A1-206ENST00000471037 TOX2Q96NM4 488 aa10.82□□□□□ -0.68
SF3A1-206ENST00000471037 SLF1Q9BQI6 1058 aa10.82□□□□□ -0.68
SF3A1-206ENST00000471037 TSEN34Q9BSV6 310 aaKnown RBP10.82□□□□□ -0.68
SF3A1-206ENST00000471037 TEX13BQ9BXU2 312 aa10.82□□□□□ -0.68
SF3A1-206ENST00000471037 PUS7LQ9H0K6 701 aaKnown RBP10.82□□□□□ -0.68
SF3A1-206ENST00000471037 CNPY2Q9Y2B0 182 aa10.82□□□□□ -0.68
SF3A1-206ENST00000471037 PLXNA1Q9UIW2 1896 aa10.82□□□□□ -0.68
SF3A1-206ENST00000471037 ZNFX1Q9P2E3 1918 aaKnown RBP10.82□□□□□ -0.68
SF3A1-206ENST00000471037 SYNGAP1Q96PV0 1343 aa10.82□□□□□ -0.68
SF3A1-206ENST00000471037 SALL3Q9BXA9 1300 aa10.82□□□□□ -0.68
SF3A1-206ENST00000471037 CDH23Q9H251 3354 aa10.81□□□□□ -0.68
SF3A1-206ENST00000471037 DNAJC25-GNG10A0A024R161 153 aa10.81□□□□□ -0.68
SF3A1-206ENST00000471037 MOXD2PA6NHM9 499 aa10.81□□□□□ -0.68
SF3A1-206ENST00000471037 ATP2A1O14983 1001 aa10.81□□□□□ -0.68
SF3A1-206ENST00000471037 MX1P20591 662 aa10.81□□□□□ -0.68
SF3A1-206ENST00000471037 EPHB4P54760 987 aa10.81□□□□□ -0.68
SF3A1-206ENST00000471037 SBK1Q52WX2 424 aa10.81□□□□□ -0.68
SF3A1-206ENST00000471037 GIMAP6Q6P9H5 292 aa10.81□□□□□ -0.68
SF3A1-206ENST00000471037 PLEKHM2Q8IWE5 1019 aa10.81□□□□□ -0.68
SF3A1-206ENST00000471037 OSBPL3Q9H4L5 887 aa10.81□□□□□ -0.68
SF3A1-206ENST00000471037 NYAP2Q9P242 653 aa10.81□□□□□ -0.68
SF3A1-206ENST00000471037 TTC41PQ6P2S7 1318 aa10.81□□□□□ -0.68
SF3A1-206ENST00000471037 SYNRGQ9UMZ2 1314 aa10.81□□□□□ -0.68
SF3A1-206ENST00000471037 PQBP1O60828 265 aaKnown RBP10.8□□□□□ -0.68
SF3A1-206ENST00000471037 RAG1P15918 1043 aa10.8□□□□□ -0.68
SF3A1-206ENST00000471037 RASA1P20936 1047 aa10.8□□□□□ -0.68
SF3A1-206ENST00000471037 CST5P28325 142 aaPredicted RBP10.8□□□□□ -0.68
SF3A1-206ENST00000471037 ACLYP53396 1101 aa10.8□□□□□ -0.68
SF3A1-206ENST00000471037 PDE1AP54750 535 aa10.8□□□□□ -0.68
SF3A1-206ENST00000471037 FPGSQ05932 587 aa10.8□□□□□ -0.68
SF3A1-206ENST00000471037 FAAP100Q0VG06 881 aa10.8□□□□□ -0.68
SF3A1-206ENST00000471037 SNRNP48Q6IEG0 339 aaKnown RBP10.8□□□□□ -0.68
SF3A1-206ENST00000471037 CCSAPQ6IQ19 270 aaPredicted RBP10.8□□□□□ -0.68
SF3A1-206ENST00000471037 ZNF467Q7Z7K2 595 aaPredicted RBP10.8□□□□□ -0.68
SF3A1-206ENST00000471037 SKAP1Q86WV1 359 aa10.8□□□□□ -0.68
SF3A1-206ENST00000471037 KLHDC9Q8NEP7 349 aa10.8□□□□□ -0.68
SF3A1-206ENST00000471037 OTUD7AQ8TE49 926 aaPredicted RBP10.8□□□□□ -0.68
SF3A1-206ENST00000471037 NUP133Q8WUM0 1156 aa10.8□□□□□ -0.68
SF3A1-206ENST00000471037 MYLIPQ8WY64 445 aa10.8□□□□□ -0.68
SF3A1-206ENST00000471037 LENG1Q96BZ8 264 aaPredicted RBP10.8□□□□□ -0.68
SF3A1-206ENST00000471037 RNPC3Q96LT9 517 aaKnown RBP10.8□□□□□ -0.68
SF3A1-206ENST00000471037 STRBPQ96SI9 672 aaKnown RBP10.8□□□□□ -0.68
SF3A1-206ENST00000471037 BCL11AQ9H165 835 aa10.8□□□□□ -0.68
SF3A1-206ENST00000471037 STARD7Q9NQZ5 370 aa10.8□□□□□ -0.68
SF3A1-206ENST00000471037 FAM184BQ9ULE4 1060 aa10.8□□□□□ -0.68
SF3A1-206ENST00000471037 SYNPO2Q9UMS6 1093 aa10.8□□□□□ -0.68
SF3A1-206ENST00000471037 SMCHD1A6NHR9 2005 aa10.8□□□□□ -0.68
SF3A1-206ENST00000471037 EYSQ5T1H1 3165 aa10.79□□□□□ -0.68
SF3A1-206ENST00000471037 IGKV6D-41A0A0C4DH26 115 aa10.79□□□□□ -0.68
SF3A1-206ENST00000471037 GSG1L2A8MUP6 293 aa10.79□□□□□ -0.68
SF3A1-206ENST00000471037 DCDC2CA8MYV0 355 aa10.79□□□□□ -0.68
SF3A1-206ENST00000471037 F5H6K3 240 aa10.79□□□□□ -0.68
SF3A1-206ENST00000471037 ERC2O15083 957 aa10.79□□□□□ -0.68
SF3A1-206ENST00000471037 RAD21O60216 631 aa10.79□□□□□ -0.68
SF3A1-206ENST00000471037 DUSP11O75319 330 aaKnown RBP10.79□□□□□ -0.68
SF3A1-206ENST00000471037 SNAI1O95863 264 aaPredicted RBP10.79□□□□□ -0.68
SF3A1-206ENST00000471037 NDUFB10O96000 172 aa10.79□□□□□ -0.68
SF3A1-206ENST00000471037 KLRC3Q07444 240 aa10.79□□□□□ -0.68
SF3A1-206ENST00000471037 PRPF38AQ8NAV1 312 aaKnown RBP10.79□□□□□ -0.68
SF3A1-206ENST00000471037 DDX11Q96FC9 970 aa10.79□□□□□ -0.68
SF3A1-206ENST00000471037 NUP88Q99567 741 aaPredicted RBP10.79□□□□□ -0.68
SF3A1-206ENST00000471037 ECHDC1Q9NTX5 307 aa10.79□□□□□ -0.68
SF3A1-206ENST00000471037 TMEM39AQ9NV64 488 aa10.79□□□□□ -0.68
SF3A1-206ENST00000471037 TBX21Q9UL17 535 aa10.79□□□□□ -0.68
SF3A1-206ENST00000471037 RIPK3Q9Y572 518 aa10.79□□□□□ -0.68
SF3A1-206ENST00000471037 VCANP13611 3396 aa10.79□□□□□ -0.68
SF3A1-206ENST00000471037 ELP1O95163 1332 aa10.79□□□□□ -0.68
SF3A1-206ENST00000471037 MROH7Q68CQ1 1323 aa10.79□□□□□ -0.68
SF3A1-206ENST00000471037 FOSL2P15408 326 aa10.78□□□□□ -0.68
SF3A1-206ENST00000471037 KBTBD3Q8NAB2 608 aa10.78□□□□□ -0.68
SF3A1-206ENST00000471037 APPBP2Q92624 585 aa10.78□□□□□ -0.68
SF3A1-206ENST00000471037 MKL1Q969V6 931 aa10.78□□□□□ -0.68
SF3A1-206ENST00000471037 MKNK2Q9HBH9 465 aa10.78□□□□□ -0.68
SF3A1-206ENST00000471037 SLC38A10Q9HBR0 1119 aa10.78□□□□□ -0.68
SF3A1-206ENST00000471037 FBXO40Q9UH90 709 aa10.78□□□□□ -0.68
SF3A1-206ENST00000471037 ZHX1Q9UKY1 873 aaPredicted RBP10.78□□□□□ -0.68
SF3A1-206ENST00000471037 SPTBN5Q9NRC6 3674 aaKnown RBP10.78□□□□□ -0.68
SF3A1-206ENST00000471037 PLIN4Q96Q06 1357 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms