RNA–Protein interactions for RNA: ENST00000470994.1

GPNMB-208, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 538 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-208ENST00000470994 INSRP06213 1382 aa7.93□□□□□ -1.14
GPNMB-208ENST00000470994 FLT4P35916 1363 aa7.93□□□□□ -1.14
GPNMB-208ENST00000470994 PALLDQ8WX93 1383 aa7.93□□□□□ -1.14
GPNMB-208ENST00000470994 NEFLP07196 543 aa7.92□□□□□ -1.14
GPNMB-208ENST00000470994 SLFN14P0C7P3 912 aa7.92□□□□□ -1.14
GPNMB-208ENST00000470994 MTMR3Q13615 1198 aa7.92□□□□□ -1.14
GPNMB-208ENST00000470994 NSD2O96028 1365 aa7.92□□□□□ -1.14
GPNMB-208ENST00000470994 NSD3Q9BZ95 1437 aa7.92□□□□□ -1.14
GPNMB-208ENST00000470994 AKAP12Q02952 1782 aa7.92□□□□□ -1.14
GPNMB-208ENST00000470994 TMEM265A0A087WTH1 108 aa7.91□□□□□ -1.14
GPNMB-208ENST00000470994 ECEL1O95672 775 aa7.91□□□□□ -1.14
GPNMB-208ENST00000470994 CDK5R2Q13319 367 aa7.91□□□□□ -1.14
GPNMB-208ENST00000470994 AOC3Q16853 763 aa7.91□□□□□ -1.14
GPNMB-208ENST00000470994 IFNL2Q8IZJ0 200 aa7.91□□□□□ -1.14
GPNMB-208ENST00000470994 ZNF576Q9H609 170 aa7.91□□□□□ -1.14
GPNMB-208ENST00000470994 POLKQ9UBT6 870 aa7.91□□□□□ -1.14
GPNMB-208ENST00000470994 ASAP1Q9ULH1 1129 aa7.91□□□□□ -1.14
GPNMB-208ENST00000470994 PPP1R9AQ9ULJ8 1098 aa7.91□□□□□ -1.14
GPNMB-208ENST00000470994 MAP3K5Q99683 1374 aa7.91□□□□□ -1.14
GPNMB-208ENST00000470994 RGPD5Q99666 1765 aa7.9□□□□□ -1.14
GPNMB-208ENST00000470994 WASHC2AQ641Q2 1341 aa7.9□□□□□ -1.14
GPNMB-208ENST00000470994 LRRC10BA6NIK2 292 aa7.9□□□□□ -1.14
GPNMB-208ENST00000470994 FZD6O60353 706 aa7.9□□□□□ -1.14
GPNMB-208ENST00000470994 SLC23A3Q6PIS1 610 aa7.9□□□□□ -1.14
GPNMB-208ENST00000470994 ZNF526Q8TF50 670 aaPredicted RBP7.9□□□□□ -1.14
GPNMB-208ENST00000470994 TOX2Q96NM4 488 aa7.9□□□□□ -1.14
GPNMB-208ENST00000470994 PANK3Q9H999 370 aa7.9□□□□□ -1.14
GPNMB-208ENST00000470994 ADAMTS6Q9UKP5 1117 aa7.9□□□□□ -1.14
GPNMB-208ENST00000470994 TIMELESSQ9UNS1 1208 aa7.9□□□□□ -1.14
GPNMB-208ENST00000470994 CD2APQ9Y5K6 639 aa7.9□□□□□ -1.14
GPNMB-208ENST00000470994 TMPRSS2O15393 492 aa7.89□□□□□ -1.15
GPNMB-208ENST00000470994 CEACAM5P06731 702 aa7.89□□□□□ -1.15
GPNMB-208ENST00000470994 PHKG2P15735 406 aa7.89□□□□□ -1.15
GPNMB-208ENST00000470994 ID3Q02535 119 aa7.89□□□□□ -1.15
GPNMB-208ENST00000470994 EIF4A2Q14240 407 aaKnown RBP7.89□□□□□ -1.15
GPNMB-208ENST00000470994 PLEKHO1Q53GL0 409 aaPredicted RBP7.89□□□□□ -1.15
GPNMB-208ENST00000470994 MORC1Q86VD1 984 aa7.89□□□□□ -1.15
GPNMB-208ENST00000470994 AMIGO3Q86WK7 504 aa7.89□□□□□ -1.15
GPNMB-208ENST00000470994 ZSWIM9Q86XI8 627 aa7.89□□□□□ -1.15
GPNMB-208ENST00000470994 SMYD4Q8IYR2 804 aaPredicted RBP7.89□□□□□ -1.15
GPNMB-208ENST00000470994 LINC00116Q8NCU8 138 aa7.89□□□□□ -1.15
GPNMB-208ENST00000470994 PPP1R16BQ96T49 567 aa7.89□□□□□ -1.15
GPNMB-208ENST00000470994 CRIM1Q9NZV1 1036 aa7.89□□□□□ -1.15
GPNMB-208ENST00000470994 SBF2Q86WG5 1849 aa7.89□□□□□ -1.15
GPNMB-208ENST00000470994 CASZ1Q86V15 1759 aa7.89□□□□□ -1.15
GPNMB-208ENST00000470994 MON2Q7Z3U7 1717 aa7.89□□□□□ -1.15
GPNMB-208ENST00000470994 MYOM1P52179 1685 aa7.89□□□□□ -1.15
GPNMB-208ENST00000470994 KIF24Q5T7B8 1368 aa7.88□□□□□ -1.15
GPNMB-208ENST00000470994 HSPA5P11021 654 aaKnown RBP7.88□□□□□ -1.15
GPNMB-208ENST00000470994 ITPKAP23677 461 aa7.88□□□□□ -1.15
GPNMB-208ENST00000470994 FKBP4Q02790 459 aaKnown RBP eCLIP7.88□□□□□ -1.15
GPNMB-208ENST00000470994 PTPN12Q05209 780 aaKnown RBP7.88□□□□□ -1.15
GPNMB-208ENST00000470994 ITPK1Q13572 414 aa7.88□□□□□ -1.15
GPNMB-208ENST00000470994 KIAA0319Q5VV43 1072 aa7.88□□□□□ -1.15
GPNMB-208ENST00000470994 CCER1Q8TC90 406 aaPredicted RBP7.88□□□□□ -1.15
GPNMB-208ENST00000470994 EHD4Q9H223 541 aa7.88□□□□□ -1.15
GPNMB-208ENST00000470994 NHSQ6T4R5 1651 aa7.88□□□□□ -1.15
GPNMB-208ENST00000470994 RGPD3A6NKT7 1758 aaPredicted RBP7.87□□□□□ -1.15
GPNMB-208ENST00000470994 RGPD4Q7Z3J3 1758 aa7.87□□□□□ -1.15
GPNMB-208ENST00000470994 MMP10P09238 476 aa7.87□□□□□ -1.15
GPNMB-208ENST00000470994 SSFA2P28290 1259 aa7.87□□□□□ -1.15
GPNMB-208ENST00000470994 RAP1GAPP47736 663 aa7.87□□□□□ -1.15
GPNMB-208ENST00000470994 KCNMB1Q16558 191 aa7.87□□□□□ -1.15
GPNMB-208ENST00000470994 ZNF530Q6P9A1 599 aaPredicted RBP7.87□□□□□ -1.15
GPNMB-208ENST00000470994 ZSCAN18Q8TBC5 510 aaPredicted RBP7.87□□□□□ -1.15
GPNMB-208ENST00000470994 FANCD2OSQ96PS1 177 aa7.87□□□□□ -1.15
GPNMB-208ENST00000470994 SERPINA10Q9UK55 444 aa7.87□□□□□ -1.15
GPNMB-208ENST00000470994 IGSF1Q8N6C5 1336 aa7.86□□□□□ -1.15
GPNMB-208ENST00000470994 HSP90AB1P08238 724 aaKnown RBP7.86□□□□□ -1.15
GPNMB-208ENST00000470994 RFC4P35249 363 aa7.86□□□□□ -1.15
GPNMB-208ENST00000470994 MTHFSP49914 203 aa7.86□□□□□ -1.15
GPNMB-208ENST00000470994 MESP2Q0VG99 397 aa7.86□□□□□ -1.15
GPNMB-208ENST00000470994 CNGB1Q14028 1251 aaPredicted RBP7.86□□□□□ -1.15
GPNMB-208ENST00000470994 RPS26P11Q5JNZ5 115 aaPredicted RBP7.86□□□□□ -1.15
GPNMB-208ENST00000470994 C1orf141Q5JVX7 400 aa7.86□□□□□ -1.15
GPNMB-208ENST00000470994 CCDC87Q9NVE4 849 aa7.86□□□□□ -1.15
GPNMB-208ENST00000470994 KNSTRNQ9Y448 316 aa7.86□□□□□ -1.15
GPNMB-208ENST00000470994 BTAF1O14981 1849 aa7.85□□□□□ -1.15
GPNMB-208ENST00000470994 A0A0G2JLW4 131 aa7.85□□□□□ -1.15
GPNMB-208ENST00000470994 ERVV-2B6SEH9 535 aa7.85□□□□□ -1.15
GPNMB-208ENST00000470994 RNGTTO60942 597 aaKnown RBP7.85□□□□□ -1.15
GPNMB-208ENST00000470994 LIG1P18858 919 aa7.85□□□□□ -1.15
GPNMB-208ENST00000470994 CD96P40200 585 aa7.85□□□□□ -1.15
GPNMB-208ENST00000470994 AMOTQ4VCS5 1084 aa7.85□□□□□ -1.15
GPNMB-208ENST00000470994 NLGN1Q8N2Q7 840 aa7.85□□□□□ -1.15
GPNMB-208ENST00000470994 PCOLCE2Q9UKZ9 415 aa7.85□□□□□ -1.15
GPNMB-208ENST00000470994 SNX11Q9Y5W9 270 aa7.85□□□□□ -1.15
GPNMB-208ENST00000470994 LTN1O94822 1766 aa7.84□□□□□ -1.15
GPNMB-208ENST00000470994 OXCT1P55809 520 aa7.84□□□□□ -1.15
GPNMB-208ENST00000470994 MLANAQ16655 118 aa7.84□□□□□ -1.15
GPNMB-208ENST00000470994 SULT6B1Q6IMI4 303 aa7.84□□□□□ -1.15
GPNMB-208ENST00000470994 AEBP1Q8IUX7 1158 aa7.84□□□□□ -1.15
GPNMB-208ENST00000470994 ASB11Q8WXH4 323 aa7.84□□□□□ -1.15
GPNMB-208ENST00000470994 DUSP23Q9BVJ7 150 aa7.84□□□□□ -1.15
GPNMB-208ENST00000470994 CCDC86Q9H6F5 360 aaKnown RBP7.84□□□□□ -1.15
GPNMB-208ENST00000470994 KRT82Q9NSB4 513 aa7.84□□□□□ -1.15
GPNMB-208ENST00000470994 WNK3Q9BYP7 1800 aa7.84□□□□□ -1.15
GPNMB-208ENST00000470994 PAPPAQ13219 1627 aa7.84□□□□□ -1.15
GPNMB-208ENST00000470994 RPS6KA4O75676 772 aa7.83□□□□□ -1.16
GPNMB-208ENST00000470994 TSPAN15O95858 294 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms