RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 ZMYM1Q5SVZ6 1142 aa9.1□□□□□ -0.95
PTP4A1-202ENST00000470661 SMIM5Q71RC9 77 aa9.1□□□□□ -0.95
PTP4A1-202ENST00000470661 MORC1Q86VD1 984 aa9.1□□□□□ -0.95
PTP4A1-202ENST00000470661 MFSD14AQ96MC6 490 aa9.1□□□□□ -0.95
PTP4A1-202ENST00000470661 YIPF2Q9BWQ6 316 aa9.1□□□□□ -0.95
PTP4A1-202ENST00000470661 SEMA6CQ9H3T2 930 aa9.1□□□□□ -0.95
PTP4A1-202ENST00000470661 GSX1Q9H4S2 264 aaPredicted RBP9.1□□□□□ -0.95
PTP4A1-202ENST00000470661 ACSS3Q9H6R3 686 aa9.1□□□□□ -0.95
PTP4A1-202ENST00000470661 DISC1Q9NRI5 854 aa9.1□□□□□ -0.95
PTP4A1-202ENST00000470661 CACNA2D2Q9NY47 1150 aa9.1□□□□□ -0.95
PTP4A1-202ENST00000470661 CSADQ9Y600 493 aa9.1□□□□□ -0.95
PTP4A1-202ENST00000470661 WASHC2AQ641Q2 1341 aa9.09□□□□□ -0.95
PTP4A1-202ENST00000470661 TNS2Q63HR2 1409 aa9.09□□□□□ -0.95
PTP4A1-202ENST00000470661 F6X3S4 739 aa9.09□□□□□ -0.95
PTP4A1-202ENST00000470661 CYP27B1O15528 508 aa9.09□□□□□ -0.95
PTP4A1-202ENST00000470661 ZNF16P17020 682 aaPredicted RBP9.09□□□□□ -0.95
PTP4A1-202ENST00000470661 PTPN11Q06124 597 aaPredicted RBP9.09□□□□□ -0.95
PTP4A1-202ENST00000470661 PAOXQ6QHF9 649 aa9.09□□□□□ -0.95
PTP4A1-202ENST00000470661 FBXL6Q8N531 539 aa9.09□□□□□ -0.95
PTP4A1-202ENST00000470661 RAPGEF4Q8WZA2 1011 aa9.09□□□□□ -0.95
PTP4A1-202ENST00000470661 EZH1Q92800 747 aaPredicted RBP9.09□□□□□ -0.95
PTP4A1-202ENST00000470661 DBNDD2Q9BQY9 259 aa9.09□□□□□ -0.95
PTP4A1-202ENST00000470661 ATXN3LQ9H3M9 355 aa9.09□□□□□ -0.95
PTP4A1-202ENST00000470661 CYP8B1Q9UNU6 501 aa9.09□□□□□ -0.95
PTP4A1-202ENST00000470661 DAGLAQ9Y4D2 1042 aa9.09□□□□□ -0.95
PTP4A1-202ENST00000470661 KIF20BQ96Q89 1820 aa9.09□□□□□ -0.95
PTP4A1-202ENST00000470661 WNK3Q9BYP7 1800 aa9.09□□□□□ -0.95
PTP4A1-202ENST00000470661 INSRP06213 1382 aa9.09□□□□□ -0.95
PTP4A1-202ENST00000470661 MAP2P11137 1827 aaKnown RBP9.08□□□□□ -0.96
PTP4A1-202ENST00000470661 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.08□□□□□ -0.96
PTP4A1-202ENST00000470661 DCDC2CA8MYV0 355 aa9.08□□□□□ -0.96
PTP4A1-202ENST00000470661 PLSCR1O15162 318 aa9.08□□□□□ -0.96
PTP4A1-202ENST00000470661 DYNC1LI2O43237 492 aaPredicted RBP9.08□□□□□ -0.96
PTP4A1-202ENST00000470661 ZBTB7AO95365 584 aa9.08□□□□□ -0.96
PTP4A1-202ENST00000470661 HCLS1P14317 486 aaPredicted RBP9.08□□□□□ -0.96
PTP4A1-202ENST00000470661 LIG3P49916 1009 aa9.08□□□□□ -0.96
PTP4A1-202ENST00000470661 ST13P50502 369 aaKnown RBP9.08□□□□□ -0.96
PTP4A1-202ENST00000470661 TTLL4Q14679 1199 aa9.08□□□□□ -0.96
PTP4A1-202ENST00000470661 ZC3H12AQ5D1E8 599 aaKnown RBP9.08□□□□□ -0.96
PTP4A1-202ENST00000470661 SHISA5Q8N114 240 aa9.08□□□□□ -0.96
PTP4A1-202ENST00000470661 PIDD1Q9HB75 910 aa9.08□□□□□ -0.96
PTP4A1-202ENST00000470661 PCDHA4Q9UN74 947 aa9.08□□□□□ -0.96
PTP4A1-202ENST00000470661 KNSTRNQ9Y448 316 aa9.08□□□□□ -0.96
PTP4A1-202ENST00000470661 PCDHB5Q9Y5E4 795 aa9.08□□□□□ -0.96
PTP4A1-202ENST00000470661 FLT4P35916 1363 aa9.08□□□□□ -0.96
PTP4A1-202ENST00000470661 GSC2O15499 205 aa9.07□□□□□ -0.96
PTP4A1-202ENST00000470661 ZNF827Q17R98 1081 aa9.07□□□□□ -0.96
PTP4A1-202ENST00000470661 SHKBP1Q8TBC3 707 aa9.07□□□□□ -0.96
PTP4A1-202ENST00000470661 GAL3ST3Q96A11 431 aa9.07□□□□□ -0.96
PTP4A1-202ENST00000470661 PRKAG2Q9UGJ0 569 aa9.07□□□□□ -0.96
PTP4A1-202ENST00000470661 FAM208AQ9UK61 1670 aaKnown RBP9.07□□□□□ -0.96
PTP4A1-202ENST00000470661 RNGTTO60942 597 aaKnown RBP9.06□□□□□ -0.96
PTP4A1-202ENST00000470661 NEFMP07197 916 aa9.06□□□□□ -0.96
PTP4A1-202ENST00000470661 ADMP35318 185 aa9.06□□□□□ -0.96
PTP4A1-202ENST00000470661 SEPT6Q14141 434 aa9.06□□□□□ -0.96
PTP4A1-202ENST00000470661 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.06□□□□□ -0.96
PTP4A1-202ENST00000470661 ZDHHC13Q8IUH4 622 aa9.06□□□□□ -0.96
PTP4A1-202ENST00000470661 NUP188Q5SRE5 1749 aa9.05□□□□□ -0.96
PTP4A1-202ENST00000470661 RTL1A6NKG5 1358 aa9.05□□□□□ -0.96
PTP4A1-202ENST00000470661 WDR64B1ANS9 1081 aa9.05□□□□□ -0.96
PTP4A1-202ENST00000470661 MTHFSP49914 203 aa9.05□□□□□ -0.96
PTP4A1-202ENST00000470661 MRPL58Q14197 206 aaKnown RBP9.05□□□□□ -0.96
PTP4A1-202ENST00000470661 MAP7Q14244 749 aa9.05□□□□□ -0.96
PTP4A1-202ENST00000470661 PPM1JQ5JR12 505 aa9.05□□□□□ -0.96
PTP4A1-202ENST00000470661 C12orf40Q86WS4 652 aa9.05□□□□□ -0.96
PTP4A1-202ENST00000470661 TBC1D32Q96NH3 1257 aa9.05□□□□□ -0.96
PTP4A1-202ENST00000470661 NOC4LQ9BVI4 516 aaKnown RBP9.05□□□□□ -0.96
PTP4A1-202ENST00000470661 TLR6Q9Y2C9 796 aa9.05□□□□□ -0.96
PTP4A1-202ENST00000470661 ABCC6O95255 1503 aa9.05□□□□□ -0.96
PTP4A1-202ENST00000470661 NSD2O96028 1365 aa9.04□□□□□ -0.96
PTP4A1-202ENST00000470661 TGFB1P01137 390 aa9.04□□□□□ -0.96
PTP4A1-202ENST00000470661 HMOX1P09601 288 aa9.04□□□□□ -0.96
PTP4A1-202ENST00000470661 TFE3P19532 575 aaPredicted RBP9.04□□□□□ -0.96
PTP4A1-202ENST00000470661 LMNB1P20700 586 aa9.04□□□□□ -0.96
PTP4A1-202ENST00000470661 CDK8P49336 464 aa9.04□□□□□ -0.96
PTP4A1-202ENST00000470661 RPS26P62854 115 aaKnown RBP9.04□□□□□ -0.96
PTP4A1-202ENST00000470661 ERVK-24P63145 666 aa9.04□□□□□ -0.96
PTP4A1-202ENST00000470661 INPP5AQ14642 412 aa9.04□□□□□ -0.96
PTP4A1-202ENST00000470661 SLC15A2Q16348 729 aa9.04□□□□□ -0.96
PTP4A1-202ENST00000470661 LRFN4Q6PJG9 635 aa9.04□□□□□ -0.96
PTP4A1-202ENST00000470661 AGMOQ6ZNB7 445 aa9.04□□□□□ -0.96
PTP4A1-202ENST00000470661 SMYD4Q8IYR2 804 aaPredicted RBP9.04□□□□□ -0.96
PTP4A1-202ENST00000470661 ISL2Q96A47 359 aa9.04□□□□□ -0.96
PTP4A1-202ENST00000470661 PICK1Q9NRD5 415 aa9.04□□□□□ -0.96
PTP4A1-202ENST00000470661 STK32BQ9NY57 414 aa9.04□□□□□ -0.96
PTP4A1-202ENST00000470661 SMG6Q86US8 1419 aaKnown RBP9.04□□□□□ -0.96
PTP4A1-202ENST00000470661 BTAF1O14981 1849 aa9.03□□□□□ -0.96
PTP4A1-202ENST00000470661 SHANK3Q9BYB0 1731 aa9.03□□□□□ -0.96
PTP4A1-202ENST00000470661 F13BP05160 661 aa9.03□□□□□ -0.96
PTP4A1-202ENST00000470661 SULT6B1Q6IMI4 303 aa9.03□□□□□ -0.96
PTP4A1-202ENST00000470661 SLC51AQ86UW1 340 aa9.03□□□□□ -0.96
PTP4A1-202ENST00000470661 PIGBQ92521 554 aa9.03□□□□□ -0.96
PTP4A1-202ENST00000470661 ELMO3Q96BJ8 720 aa9.03□□□□□ -0.96
PTP4A1-202ENST00000470661 C1GALT1Q9NS00 363 aa9.03□□□□□ -0.96
PTP4A1-202ENST00000470661 RNF112Q9ULX5 631 aa9.03□□□□□ -0.96
PTP4A1-202ENST00000470661 BCL9O00512 1426 aa9.03□□□□□ -0.96
PTP4A1-202ENST00000470661 RREB1Q92766 1687 aa9.03□□□□□ -0.96
PTP4A1-202ENST00000470661 PARD3Q8TEW0 1356 aa9.02□□□□□ -0.97
PTP4A1-202ENST00000470661 SCO2A0A1W2PP80 73 aa9.02□□□□□ -0.97
PTP4A1-202ENST00000470661 FAM170BA6NMN3 283 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms