RNA–Protein interactions for RNA: ENST00000470586.5

PRDM15-210, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 2,283 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-210ENST00000470586 RRP36Q96EU6 259 aaKnown RBP16.53■□□□□ 0.24
PRDM15-210ENST00000470586 USP28Q96RU2 1077 aa16.53■□□□□ 0.24
PRDM15-210ENST00000470586 SPZ1Q9BXG8 430 aa16.53■□□□□ 0.24
PRDM15-210ENST00000470586 PPP2R3BQ9Y5P8 575 aa16.53■□□□□ 0.24
PRDM15-210ENST00000470586 NLRP5P59047 1200 aa16.53■□□□□ 0.24
PRDM15-210ENST00000470586 PHF20Q9BVI0 1012 aa16.53■□□□□ 0.24
PRDM15-210ENST00000470586 VCPKMTQ9H867 229 aa16.53■□□□□ 0.24
PRDM15-210ENST00000470586 PICK1Q9NRD5 415 aa16.53■□□□□ 0.24
PRDM15-210ENST00000470586 LMBRD1Q9NUN5 540 aa16.53■□□□□ 0.24
PRDM15-210ENST00000470586 STXBP3O00186 592 aa16.52■□□□□ 0.24
PRDM15-210ENST00000470586 DCAF4Q8WV16 495 aa16.52■□□□□ 0.24
PRDM15-210ENST00000470586 KIFC2Q96AC6 838 aa16.52■□□□□ 0.24
PRDM15-210ENST00000470586 ELP3Q9H9T3 547 aa16.52■□□□□ 0.24
PRDM15-210ENST00000470586 CLIC4Q9Y696 253 aa16.52■□□□□ 0.24
PRDM15-210ENST00000470586 ATAD5Q96QE3 1844 aa16.52■□□□□ 0.23
PRDM15-210ENST00000470586 WNT7AO00755 349 aa16.52■□□□□ 0.23
PRDM15-210ENST00000470586 HMGCS2P54868 508 aa16.52■□□□□ 0.23
PRDM15-210ENST00000470586 GPATCH4Q5T3I0 446 aaKnown RBP16.52■□□□□ 0.23
PRDM15-210ENST00000470586 PNMA8AQ86V59 439 aaPredicted RBP16.52■□□□□ 0.23
PRDM15-210ENST00000470586 ZC3H15Q8WU90 426 aaKnown RBP16.52■□□□□ 0.23
PRDM15-210ENST00000470586 GMCL1Q96IK5 515 aa16.52■□□□□ 0.23
PRDM15-210ENST00000470586 GOPCQ9HD26 462 aa16.52■□□□□ 0.23
PRDM15-210ENST00000470586 EMILIN3Q9NT22 766 aa16.52■□□□□ 0.23
PRDM15-210ENST00000470586 SEC63Q9UGP8 760 aaKnown RBP16.52■□□□□ 0.23
PRDM15-210ENST00000470586 USH1GQ495M9 461 aa16.51■□□□□ 0.23
PRDM15-210ENST00000470586 LZTS2Q9BRK4 669 aa16.51■□□□□ 0.23
PRDM15-210ENST00000470586 SNCAIPQ9Y6H5 919 aa16.51■□□□□ 0.23
PRDM15-210ENST00000470586 PPP1R12BO60237 982 aaPredicted RBP16.5■□□□□ 0.23
PRDM15-210ENST00000470586 NAPAP54920 295 aa16.5■□□□□ 0.23
PRDM15-210ENST00000470586 CDC37Q16543 378 aaPredicted RBP16.5■□□□□ 0.23
PRDM15-210ENST00000470586 QRICH1Q2TAL8 776 aa16.5■□□□□ 0.23
PRDM15-210ENST00000470586 GZF1Q9H116 711 aaPredicted RBP16.5■□□□□ 0.23
PRDM15-210ENST00000470586 ZSCAN16Q9H4T2 348 aaPredicted RBP16.5■□□□□ 0.23
PRDM15-210ENST00000470586 BARHL2Q9NY43 387 aa16.5■□□□□ 0.23
PRDM15-210ENST00000470586 SMCHD1A6NHR9 2005 aa16.5■□□□□ 0.23
PRDM15-210ENST00000470586 MAP3K9P80192 1104 aa16.5■□□□□ 0.23
PRDM15-210ENST00000470586 PPP4R3BQ5MIZ7 849 aa16.5■□□□□ 0.23
PRDM15-210ENST00000470586 MYSM1Q5VVJ2 828 aa16.5■□□□□ 0.23
PRDM15-210ENST00000470586 CCDC174Q6PII3 467 aa16.5■□□□□ 0.23
PRDM15-210ENST00000470586 PGBD1Q96JS3 809 aa16.5■□□□□ 0.23
PRDM15-210ENST00000470586 PRR12Q9ULL5 1215 aa16.5■□□□□ 0.23
PRDM15-210ENST00000470586 U2AF2P26368 475 aaKnown RBP eCLIP16.49■□□□□ 0.23
PRDM15-210ENST00000470586 SYDE2Q5VT97 1194 aa16.49■□□□□ 0.23
PRDM15-210ENST00000470586 NOSTRINQ8IVI9 506 aa16.49■□□□□ 0.23
PRDM15-210ENST00000470586 ZNF280CQ8ND82 737 aa16.49■□□□□ 0.23
PRDM15-210ENST00000470586 ATP6V1DQ9Y5K8 247 aa16.49■□□□□ 0.23
PRDM15-210ENST00000470586 VCAM1P19320 739 aa16.49■□□□□ 0.23
PRDM15-210ENST00000470586 TOB1P50616 345 aaPredicted RBP16.49■□□□□ 0.23
PRDM15-210ENST00000470586 KRT85P78386 507 aa16.49■□□□□ 0.23
PRDM15-210ENST00000470586 MKRN3Q13064 507 aaKnown RBP16.49■□□□□ 0.23
PRDM15-210ENST00000470586 SAFBQ15424 915 aaKnown RBP eCLIP16.49■□□□□ 0.23
PRDM15-210ENST00000470586 GPT2Q8TD30 523 aa16.49■□□□□ 0.23
PRDM15-210ENST00000470586 HOOK2Q96ED9 719 aa16.49■□□□□ 0.23
PRDM15-210ENST00000470586 OTUD5Q96G74 571 aa16.49■□□□□ 0.23
PRDM15-210ENST00000470586 WNK4Q96J92 1243 aa16.49■□□□□ 0.23
PRDM15-210ENST00000470586 TMEM260Q9NX78 707 aa16.49■□□□□ 0.23
PRDM15-210ENST00000470586 MRVI1Q9Y6F6 885 aa16.49■□□□□ 0.23
PRDM15-210ENST00000470586 SMCO2A6NFE2 343 aa16.48■□□□□ 0.23
PRDM15-210ENST00000470586 ZBTB5O15062 677 aa16.48■□□□□ 0.23
PRDM15-210ENST00000470586 TRAK2O60296 914 aa16.48■□□□□ 0.23
PRDM15-210ENST00000470586 PEX10O60683 326 aa16.48■□□□□ 0.23
PRDM15-210ENST00000470586 XBP1P17861 261 aa16.48■□□□□ 0.23
PRDM15-210ENST00000470586 KRT2P35908 639 aa16.48■□□□□ 0.23
PRDM15-210ENST00000470586 STAT2P52630 851 aa16.48■□□□□ 0.23
PRDM15-210ENST00000470586 BACE1P56817 501 aa16.48■□□□□ 0.23
PRDM15-210ENST00000470586 PIK3AP1Q6ZUJ8 805 aa16.48■□□□□ 0.23
PRDM15-210ENST00000470586 TANGO6Q9C0B7 1094 aa16.48■□□□□ 0.23
PRDM15-210ENST00000470586 PNMA6FA0A0J9YX94 578 aa16.48■□□□□ 0.23
PRDM15-210ENST00000470586 LEO1Q8WVC0 666 aaPredicted RBP16.48■□□□□ 0.23
PRDM15-210ENST00000470586 SPATA32Q96LK8 384 aa16.48■□□□□ 0.23
PRDM15-210ENST00000470586 KIAA1683Q9H0B3 1180 aa16.48■□□□□ 0.23
PRDM15-210ENST00000470586 BIN2Q9UBW5 565 aaPredicted RBP16.48■□□□□ 0.23
PRDM15-210ENST00000470586 DDX11L8A8MPP1 907 aa16.47■□□□□ 0.23
PRDM15-210ENST00000470586 GOLGA6L22H0YM25 854 aa16.47■□□□□ 0.23
PRDM15-210ENST00000470586 UBE2SQ16763 222 aa16.47■□□□□ 0.23
PRDM15-210ENST00000470586 CSADQ9Y600 493 aa16.47■□□□□ 0.23
PRDM15-210ENST00000470586 IRF6O14896 467 aa16.47■□□□□ 0.23
PRDM15-210ENST00000470586 MARCKSP29966 332 aaPredicted RBP16.47■□□□□ 0.23
PRDM15-210ENST00000470586 IREB2P48200 963 aaKnown RBP16.47■□□□□ 0.23
PRDM15-210ENST00000470586 JAKMIP3Q5VZ66 844 aa16.47■□□□□ 0.23
PRDM15-210ENST00000470586 RPAP3Q9H6T3 665 aaPredicted RBP16.47■□□□□ 0.23
PRDM15-210ENST00000470586 SH2D4AQ9H788 454 aa16.47■□□□□ 0.23
PRDM15-210ENST00000470586 RBM27Q9P2N5 1060 aaKnown RBP16.47■□□□□ 0.23
PRDM15-210ENST00000470586 AFG3L2Q9Y4W6 797 aa16.47■□□□□ 0.23
PRDM15-210ENST00000470586 PCDHB6Q9Y5E3 794 aa16.47■□□□□ 0.23
PRDM15-210ENST00000470586 PCDHA1Q9Y5I3 950 aa16.47■□□□□ 0.23
PRDM15-210ENST00000470586 CENPFP49454 3210 aa16.46■□□□□ 0.23
PRDM15-210ENST00000470586 NF2P35240 595 aa16.46■□□□□ 0.23
PRDM15-210ENST00000470586 SF3A1Q15459 793 aaKnown RBP16.46■□□□□ 0.23
PRDM15-210ENST00000470586 BLIDQ8IZY5 108 aa16.46■□□□□ 0.23
PRDM15-210ENST00000470586 TNFRSF25Q93038 417 aa16.46■□□□□ 0.23
PRDM15-210ENST00000470586 MTMR8Q96EF0 704 aa16.46■□□□□ 0.23
PRDM15-210ENST00000470586 FOXP1Q9H334 677 aaPredicted RBP16.46■□□□□ 0.23
PRDM15-210ENST00000470586 PCDHA6Q9UN73 950 aa16.46■□□□□ 0.23
PRDM15-210ENST00000470586 PCDHA4Q9UN74 947 aa16.46■□□□□ 0.23
PRDM15-210ENST00000470586 PCDHA8Q9Y5H6 950 aa16.46■□□□□ 0.23
PRDM15-210ENST00000470586 DDX49Q9Y6V7 483 aaKnown RBP16.46■□□□□ 0.23
PRDM15-210ENST00000470586 DOCK1Q14185 1865 aa16.46■□□□□ 0.22
PRDM15-210ENST00000470586 USP17L15C9J2P7 530 aa16.45■□□□□ 0.22
PRDM15-210ENST00000470586 USP17L13C9JLJ4 530 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms