RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 ATP2B2Q01814 1243 aa12.57□□□□□ -0.4
SND1-208ENST00000470463 NR5A1Q13285 461 aa12.57□□□□□ -0.4
SND1-208ENST00000470463 CCDC96Q2M329 555 aa12.57□□□□□ -0.4
SND1-208ENST00000470463 HEATR3Q7Z4Q2 680 aa12.57□□□□□ -0.4
SND1-208ENST00000470463 ELOA2Q8IYF1 753 aaPredicted RBP12.57□□□□□ -0.4
SND1-208ENST00000470463 GPC2Q8N158 579 aa12.57□□□□□ -0.4
SND1-208ENST00000470463 LRRC47Q8N1G4 583 aaKnown RBP12.57□□□□□ -0.4
SND1-208ENST00000470463 TNFRSF25Q93038 417 aa12.57□□□□□ -0.4
SND1-208ENST00000470463 FTOQ9C0B1 505 aaKnown RBP eCLIP12.57□□□□□ -0.4
SND1-208ENST00000470463 GOPCQ9HD26 462 aa12.57□□□□□ -0.4
SND1-208ENST00000470463 CNOT7Q9UIV1 285 aaKnown RBP12.57□□□□□ -0.4
SND1-208ENST00000470463 SRPRBQ9Y5M8 271 aaKnown RBP12.57□□□□□ -0.4
SND1-208ENST00000470463 PPP2R3BQ9Y5P8 575 aa12.57□□□□□ -0.4
SND1-208ENST00000470463 SIPA1L1O43166 1804 aa12.57□□□□□ -0.4
SND1-208ENST00000470463 ZC3H4Q9UPT8 1303 aaKnown RBP12.57□□□□□ -0.4
SND1-208ENST00000470463 CNTNAP1P78357 1384 aa12.56□□□□□ -0.4
SND1-208ENST00000470463 UBE2Q2LH0YL09 131 aa12.56□□□□□ -0.4
SND1-208ENST00000470463 ZBTB5O15062 677 aa12.56□□□□□ -0.4
SND1-208ENST00000470463 NR1I2O75469 434 aa12.56□□□□□ -0.4
SND1-208ENST00000470463 ASNSP08243 561 aa12.56□□□□□ -0.4
SND1-208ENST00000470463 GOLGA8HP0CJ92 632 aa12.56□□□□□ -0.4
SND1-208ENST00000470463 PTPREP23469 700 aa12.56□□□□□ -0.4
SND1-208ENST00000470463 GMPSP49915 693 aaPredicted RBP12.56□□□□□ -0.4
SND1-208ENST00000470463 SEPT2Q15019 361 aa12.56□□□□□ -0.4
SND1-208ENST00000470463 NPY5RQ15761 445 aa12.56□□□□□ -0.4
SND1-208ENST00000470463 TTC38Q5R3I4 469 aa12.56□□□□□ -0.4
SND1-208ENST00000470463 AXDND1Q5T1B0 1012 aaPredicted RBP12.56□□□□□ -0.4
SND1-208ENST00000470463 DCAF15Q66K64 600 aa12.56□□□□□ -0.4
SND1-208ENST00000470463 ARL6IP4Q66PJ3 421 aaKnown RBP12.56□□□□□ -0.4
SND1-208ENST00000470463 SLFN13Q68D06 897 aa12.56□□□□□ -0.4
SND1-208ENST00000470463 WWC2Q6AWC2 1192 aa12.56□□□□□ -0.4
SND1-208ENST00000470463 SASS6Q6UVJ0 657 aa12.56□□□□□ -0.4
SND1-208ENST00000470463 GAS2L3Q86XJ1 694 aa12.56□□□□□ -0.4
SND1-208ENST00000470463 APOBEC3FQ8IUX4 373 aaKnown RBP12.56□□□□□ -0.4
SND1-208ENST00000470463 MICALL2Q8IY33 904 aa12.56□□□□□ -0.4
SND1-208ENST00000470463 ENGASEQ8NFI3 743 aa12.56□□□□□ -0.4
SND1-208ENST00000470463 NAP1L4Q99733 375 aaKnown RBP12.56□□□□□ -0.4
SND1-208ENST00000470463 MTMR7Q9Y216 660 aa12.56□□□□□ -0.4
SND1-208ENST00000470463 hCG_1642624A0A1W2PR95 340 aa12.55□□□□□ -0.4
SND1-208ENST00000470463 GH2P01242 217 aa12.55□□□□□ -0.4
SND1-208ENST00000470463 CAP2P40123 477 aa12.55□□□□□ -0.4
SND1-208ENST00000470463 TOB1P50616 345 aaPredicted RBP12.55□□□□□ -0.4
SND1-208ENST00000470463 SNW1Q13573 536 aaKnown RBP12.55□□□□□ -0.4
SND1-208ENST00000470463 ZRSR1Q15695 479 aaKnown RBP12.55□□□□□ -0.4
SND1-208ENST00000470463 KIF4BQ2VIQ3 1234 aa12.55□□□□□ -0.4
SND1-208ENST00000470463 RESP18Q5W5W9 173 aa12.55□□□□□ -0.4
SND1-208ENST00000470463 DPY19L2Q6NUT2 758 aa12.55□□□□□ -0.4
SND1-208ENST00000470463 KANK3Q6NY19 840 aa12.55□□□□□ -0.4
SND1-208ENST00000470463 FMR1NBQ8N0W7 255 aaPredicted RBP12.55□□□□□ -0.4
SND1-208ENST00000470463 OXER1Q8TDS5 423 aa12.55□□□□□ -0.4
SND1-208ENST00000470463 MTMR8Q96EF0 704 aa12.55□□□□□ -0.4
SND1-208ENST00000470463 USP25Q9UHP3 1055 aa12.55□□□□□ -0.4
SND1-208ENST00000470463 MYH4Q9Y623 1939 aa12.54□□□□□ -0.4
SND1-208ENST00000470463 SMCO2A6NFE2 343 aa12.54□□□□□ -0.4
SND1-208ENST00000470463 F5H6K3 240 aa12.54□□□□□ -0.4
SND1-208ENST00000470463 M0R2N6 131 aa12.54□□□□□ -0.4
SND1-208ENST00000470463 PLA2G6O60733 806 aa12.54□□□□□ -0.4
SND1-208ENST00000470463 XRCC6P12956 609 aaKnown RBP eCLIP12.54□□□□□ -0.4
SND1-208ENST00000470463 MARCKSP29966 332 aaPredicted RBP12.54□□□□□ -0.4
SND1-208ENST00000470463 SYKP43405 635 aa12.54□□□□□ -0.4
SND1-208ENST00000470463 ADCY7P51828 1080 aa12.54□□□□□ -0.4
SND1-208ENST00000470463 MRPL12P52815 198 aaKnown RBP12.54□□□□□ -0.4
SND1-208ENST00000470463 RASSF7Q02833 373 aa12.54□□□□□ -0.4
SND1-208ENST00000470463 KLRC3Q07444 240 aa12.54□□□□□ -0.4
SND1-208ENST00000470463 RASA3Q14644 834 aa12.54□□□□□ -0.4
SND1-208ENST00000470463 NONOQ15233 471 aaKnown RBP eCLIP12.54□□□□□ -0.4
SND1-208ENST00000470463 NBPF9Q3BBW0 867 aa12.54□□□□□ -0.4
SND1-208ENST00000470463 BTNL9Q6UXG8 535 aa12.54□□□□□ -0.4
SND1-208ENST00000470463 PIK3AP1Q6ZUJ8 805 aa12.54□□□□□ -0.4
SND1-208ENST00000470463 ADGRF4Q8IZF3 695 aa12.54□□□□□ -0.4
SND1-208ENST00000470463 GPKOWQ92917 476 aaPredicted RBP eCLIP12.54□□□□□ -0.4
SND1-208ENST00000470463 PIGSQ96S52 555 aa12.54□□□□□ -0.4
SND1-208ENST00000470463 SDF4Q9BRK5 362 aa12.54□□□□□ -0.4
SND1-208ENST00000470463 GPCPD1Q9NPB8 672 aa12.54□□□□□ -0.4
SND1-208ENST00000470463 ZBTB21Q9ULJ3 1066 aa12.54□□□□□ -0.4
SND1-208ENST00000470463 TMX2Q9Y320 296 aa12.54□□□□□ -0.4
SND1-208ENST00000470463 PCDHB6Q9Y5E3 794 aa12.54□□□□□ -0.4
SND1-208ENST00000470463 GJA3Q9Y6H8 435 aa12.54□□□□□ -0.4
SND1-208ENST00000470463 FRMPD2Q68DX3 1309 aaPredicted RBP12.54□□□□□ -0.4
SND1-208ENST00000470463 GLTPD2A6NH11 291 aa12.53□□□□□ -0.4
SND1-208ENST00000470463 CTNND1O60716 968 aaKnown RBP12.53□□□□□ -0.4
SND1-208ENST00000470463 ZNF202O95125 648 aa12.53□□□□□ -0.4
SND1-208ENST00000470463 GDF11O95390 407 aa12.53□□□□□ -0.4
SND1-208ENST00000470463 BMP3P12645 472 aa12.53□□□□□ -0.4
SND1-208ENST00000470463 ATP2C1P98194 919 aaPredicted RBP12.53□□□□□ -0.4
SND1-208ENST00000470463 TPRNQ4KMQ1 711 aa12.53□□□□□ -0.4
SND1-208ENST00000470463 FAM160B2Q86V87 743 aa12.53□□□□□ -0.4
SND1-208ENST00000470463 HOMER1Q86YM7 354 aa12.53□□□□□ -0.4
SND1-208ENST00000470463 REXO1Q8N1G1 1221 aaKnown RBP12.53□□□□□ -0.4
SND1-208ENST00000470463 CHURC1Q8WUH1 139 aa12.53□□□□□ -0.4
SND1-208ENST00000470463 PIBF1Q8WXW3 757 aa12.53□□□□□ -0.4
SND1-208ENST00000470463 FUCA2Q9BTY2 467 aa12.53□□□□□ -0.4
SND1-208ENST00000470463 TMEM39BQ9GZU3 492 aa12.53□□□□□ -0.4
SND1-208ENST00000470463 UBA5Q9GZZ9 404 aa12.53□□□□□ -0.4
SND1-208ENST00000470463 JMJD4Q9H9V9 463 aa12.53□□□□□ -0.4
SND1-208ENST00000470463 VAT1LQ9HCJ6 419 aa12.53□□□□□ -0.4
SND1-208ENST00000470463 RIC8AQ9NPQ8 531 aa12.53□□□□□ -0.4
SND1-208ENST00000470463 FBXO2Q9UK22 296 aaPredicted RBP12.53□□□□□ -0.4
SND1-208ENST00000470463 PNMA2Q9UL42 364 aa12.53□□□□□ -0.4
SND1-208ENST00000470463 PCDHA6Q9UN73 950 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms