RNA–Protein interactions for RNA: ENST00000470458.1

RFTN1-208, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-208ENST00000470458 LAMA4Q16363 1823 aa12.78□□□□□ -0.36
RFTN1-208ENST00000470458 FOXP2O15409 715 aa12.78□□□□□ -0.36
RFTN1-208ENST00000470458 ELNP15502 786 aa12.78□□□□□ -0.36
RFTN1-208ENST00000470458 HAND2P61296 217 aa12.78□□□□□ -0.36
RFTN1-208ENST00000470458 TMEM132BQ14DG7 1078 aa12.78□□□□□ -0.36
RFTN1-208ENST00000470458 RNF20Q5VTR2 975 aa12.78□□□□□ -0.36
RFTN1-208ENST00000470458 SAMD1Q6SPF0 538 aaPredicted RBP12.78□□□□□ -0.36
RFTN1-208ENST00000470458 CLEC10AQ8IUN9 316 aa12.78□□□□□ -0.36
RFTN1-208ENST00000470458 ANKS1AQ92625 1134 aa12.78□□□□□ -0.36
RFTN1-208ENST00000470458 KIFC2Q96AC6 838 aa12.78□□□□□ -0.36
RFTN1-208ENST00000470458 DDX11Q96FC9 970 aa12.78□□□□□ -0.36
RFTN1-208ENST00000470458 MMP19Q99542 508 aa12.78□□□□□ -0.36
RFTN1-208ENST00000470458 MTA3Q9BTC8 594 aa12.78□□□□□ -0.36
RFTN1-208ENST00000470458 SLC38A10Q9HBR0 1119 aa12.78□□□□□ -0.36
RFTN1-208ENST00000470458 PAK6Q9NQU5 681 aaPredicted RBP12.78□□□□□ -0.36
RFTN1-208ENST00000470458 A0A0G2JMZ2 1700 aa12.78□□□□□ -0.36
RFTN1-208ENST00000470458 ZSWIM8A7E2V4 1837 aa12.78□□□□□ -0.36
RFTN1-208ENST00000470458 ZNF236Q9UL36 1845 aa12.78□□□□□ -0.36
RFTN1-208ENST00000470458 PDE4DIPQ5VU43 2346 aa12.78□□□□□ -0.36
RFTN1-208ENST00000470458 PLXNB2O15031 1838 aa12.77□□□□□ -0.37
RFTN1-208ENST00000470458 COL11A1P12107 1806 aaPredicted RBP12.77□□□□□ -0.37
RFTN1-208ENST00000470458 TMEM232C9JQI7 657 aa12.77□□□□□ -0.37
RFTN1-208ENST00000470458 SMIM22K7EJ46 135 aa12.77□□□□□ -0.37
RFTN1-208ENST00000470458 SGSM2O43147 1006 aa12.77□□□□□ -0.37
RFTN1-208ENST00000470458 GSPT1P15170 499 aaKnown RBP12.77□□□□□ -0.37
RFTN1-208ENST00000470458 MCCP23508 829 aa12.77□□□□□ -0.37
RFTN1-208ENST00000470458 ADORA2AP29274 412 aa12.77□□□□□ -0.37
RFTN1-208ENST00000470458 KIAA1755Q5JYT7 1200 aa12.77□□□□□ -0.37
RFTN1-208ENST00000470458 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.77□□□□□ -0.37
RFTN1-208ENST00000470458 RALYLQ86SE5 291 aaKnown RBP12.77□□□□□ -0.37
RFTN1-208ENST00000470458 LRRC47Q8N1G4 583 aaKnown RBP12.77□□□□□ -0.37
RFTN1-208ENST00000470458 TMTC2Q8N394 836 aa12.77□□□□□ -0.37
RFTN1-208ENST00000470458 U2AF1L4Q8WU68 220 aaKnown RBP12.77□□□□□ -0.37
RFTN1-208ENST00000470458 MPHOSPH6Q99547 160 aaKnown RBP12.77□□□□□ -0.37
RFTN1-208ENST00000470458 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.77□□□□□ -0.37
RFTN1-208ENST00000470458 KAT14Q9H8E8 782 aa12.77□□□□□ -0.37
RFTN1-208ENST00000470458 IL17RBQ9NRM6 502 aa12.77□□□□□ -0.37
RFTN1-208ENST00000470458 B4DLN1 442 aa12.76□□□□□ -0.37
RFTN1-208ENST00000470458 PRKAR2AP13861 404 aaKnown RBP12.76□□□□□ -0.37
RFTN1-208ENST00000470458 EN2P19622 333 aaPredicted RBP12.76□□□□□ -0.37
RFTN1-208ENST00000470458 MRPL12P52815 198 aaKnown RBP12.76□□□□□ -0.37
RFTN1-208ENST00000470458 CCDC96Q2M329 555 aa12.76□□□□□ -0.37
RFTN1-208ENST00000470458 MAP3K21Q5TCX8 1036 aa12.76□□□□□ -0.37
RFTN1-208ENST00000470458 SNRNP48Q6IEG0 339 aaKnown RBP12.76□□□□□ -0.37
RFTN1-208ENST00000470458 BTNL9Q6UXG8 535 aa12.76□□□□□ -0.37
RFTN1-208ENST00000470458 ZNF467Q7Z7K2 595 aaPredicted RBP12.76□□□□□ -0.37
RFTN1-208ENST00000470458 NCOA7Q8NI08 942 aa12.76□□□□□ -0.37
RFTN1-208ENST00000470458 ZSCAN10Q96SZ4 725 aaPredicted RBP12.76□□□□□ -0.37
RFTN1-208ENST00000470458 TMEM47Q9BQJ4 181 aa12.76□□□□□ -0.37
RFTN1-208ENST00000470458 UNC93B1Q9H1C4 597 aa12.76□□□□□ -0.37
RFTN1-208ENST00000470458 ZNF214Q9UL59 606 aaPredicted RBP12.76□□□□□ -0.37
RFTN1-208ENST00000470458 PFASO15067 1338 aa12.76□□□□□ -0.37
RFTN1-208ENST00000470458 LOC102724159A0A0B4J2E5 919 aa12.75□□□□□ -0.37
RFTN1-208ENST00000470458 POTEFA5A3E0 1075 aa12.75□□□□□ -0.37
RFTN1-208ENST00000470458 KDM4AO75164 1064 aa12.75□□□□□ -0.37
RFTN1-208ENST00000470458 PWP2Q15269 919 aaKnown RBP12.75□□□□□ -0.37
RFTN1-208ENST00000470458 MTFR1Q15390 333 aa12.75□□□□□ -0.37
RFTN1-208ENST00000470458 ASPRV1Q53RT3 343 aa12.75□□□□□ -0.37
RFTN1-208ENST00000470458 NECAB2Q7Z6G3 386 aa12.75□□□□□ -0.37
RFTN1-208ENST00000470458 ANKRD35Q8N283 1001 aa12.75□□□□□ -0.37
RFTN1-208ENST00000470458 ARRDC4Q8NCT1 418 aa12.75□□□□□ -0.37
RFTN1-208ENST00000470458 TRIB2Q92519 343 aa12.75□□□□□ -0.37
RFTN1-208ENST00000470458 MAP4K1Q92918 833 aa12.75□□□□□ -0.37
RFTN1-208ENST00000470458 DEFB118Q96PH6 123 aa12.75□□□□□ -0.37
RFTN1-208ENST00000470458 CRISPLD2Q9H0B8 497 aa12.75□□□□□ -0.37
RFTN1-208ENST00000470458 ACAD9Q9H845 621 aa12.75□□□□□ -0.37
RFTN1-208ENST00000470458 FBXO28Q9NVF7 368 aa12.75□□□□□ -0.37
RFTN1-208ENST00000470458 ZSWIM5Q9P217 1185 aa12.75□□□□□ -0.37
RFTN1-208ENST00000470458 NR2E3Q9Y5X4 410 aa12.75□□□□□ -0.37
RFTN1-208ENST00000470458 MYCP01106 439 aaPredicted RBP12.74□□□□□ -0.37
RFTN1-208ENST00000470458 IFIT1BQ5T764 474 aaKnown RBP12.74□□□□□ -0.37
RFTN1-208ENST00000470458 POTEEQ6S8J3 1075 aa12.74□□□□□ -0.37
RFTN1-208ENST00000470458 CPXCR1Q8N123 301 aa12.74□□□□□ -0.37
RFTN1-208ENST00000470458 REPS2Q8NFH8 660 aa12.74□□□□□ -0.37
RFTN1-208ENST00000470458 NUP88Q99567 741 aaPredicted RBP12.74□□□□□ -0.37
RFTN1-208ENST00000470458 CNPY2Q9Y2B0 182 aa12.74□□□□□ -0.37
RFTN1-208ENST00000470458 SYNGAP1Q96PV0 1343 aa12.73□□□□□ -0.37
RFTN1-208ENST00000470458 B4E1Z4 1266 aa12.73□□□□□ -0.37
RFTN1-208ENST00000470458 CDC45O75419 566 aa12.73□□□□□ -0.37
RFTN1-208ENST00000470458 FARP2O94887 1054 aaPredicted RBP12.73□□□□□ -0.37
RFTN1-208ENST00000470458 ICAM1P05362 532 aa12.73□□□□□ -0.37
RFTN1-208ENST00000470458 PARP1P09874 1014 aaKnown RBP12.73□□□□□ -0.37
RFTN1-208ENST00000470458 PDHBP11177 359 aa12.73□□□□□ -0.37
RFTN1-208ENST00000470458 CACNB2Q08289 660 aaPredicted RBP12.73□□□□□ -0.37
RFTN1-208ENST00000470458 SYDE2Q5VT97 1194 aa12.73□□□□□ -0.37
RFTN1-208ENST00000470458 TBC1D10CQ8IV04 446 aa12.73□□□□□ -0.37
RFTN1-208ENST00000470458 PNMA1Q8ND90 353 aa12.73□□□□□ -0.37
RFTN1-208ENST00000470458 NBPF3Q9H094 633 aa12.73□□□□□ -0.37
RFTN1-208ENST00000470458 PPP4R2Q9NY27 417 aa12.73□□□□□ -0.37
RFTN1-208ENST00000470458 ADD3Q9UEY8 706 aaKnown RBP12.73□□□□□ -0.37
RFTN1-208ENST00000470458 PRR12Q9ULL5 1215 aa12.73□□□□□ -0.37
RFTN1-208ENST00000470458 PLXNA1Q9UIW2 1896 aa12.72□□□□□ -0.37
RFTN1-208ENST00000470458 ASB14A6NK59 587 aa12.72□□□□□ -0.37
RFTN1-208ENST00000470458 EPB41L2O43491 1005 aaKnown RBP12.72□□□□□ -0.37
RFTN1-208ENST00000470458 NMT2O60551 498 aa12.72□□□□□ -0.37
RFTN1-208ENST00000470458 SNHG28P0DPA3 235 aa12.72□□□□□ -0.37
RFTN1-208ENST00000470458 CNGA1P29973 690 aa12.72□□□□□ -0.37
RFTN1-208ENST00000470458 ZNF543Q08ER8 600 aa12.72□□□□□ -0.37
RFTN1-208ENST00000470458 KRT32Q14532 448 aa12.72□□□□□ -0.37
RFTN1-208ENST00000470458 PRPF38BQ5VTL8 546 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms