RNA–Protein interactions for RNA: ENST00000470399.1

TTC19-204, Transcript of tetratricopeptide repeat domain 19, humanhuman

TSL 5

Gene TTC19, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-204ENST00000470399 EPB41L4AQ9HCS5 686 aaPredicted RBP29.38■■■□□ 2.29
TTC19-204ENST00000470399 DNAJC25-GNG10A0A024R161 153 aa29.37■■■□□ 2.29
TTC19-204ENST00000470399 IGKV6D-41A0A0C4DH26 115 aa29.37■■■□□ 2.29
TTC19-204ENST00000470399 NDUFB10O96000 172 aa29.37■■■□□ 2.29
TTC19-204ENST00000470399 AKR1A1P14550 325 aa29.37■■■□□ 2.29
TTC19-204ENST00000470399 IRX5P78411 483 aaPredicted RBP29.37■■■□□ 2.29
TTC19-204ENST00000470399 SMAD3P84022 425 aaKnown RBP29.37■■■□□ 2.29
TTC19-204ENST00000470399 ZSCAN25Q6NSZ9 544 aa29.37■■■□□ 2.29
TTC19-204ENST00000470399 RNF180Q86T96 592 aa29.37■■■□□ 2.29
TTC19-204ENST00000470399 NYAP2Q9P242 653 aa29.37■■■□□ 2.29
TTC19-204ENST00000470399 SYNRGQ9UMZ2 1314 aa29.37■■■□□ 2.29
TTC19-204ENST00000470399 KIAA0355O15063 1070 aa29.36■■■□□ 2.29
TTC19-204ENST00000470399 SNRNP48Q6IEG0 339 aaKnown RBP29.36■■■□□ 2.29
TTC19-204ENST00000470399 CCSAPQ6IQ19 270 aaPredicted RBP29.36■■■□□ 2.29
TTC19-204ENST00000470399 KLHDC9Q8NEP7 349 aa29.36■■■□□ 2.29
TTC19-204ENST00000470399 FGD4Q96M96 766 aa29.36■■■□□ 2.29
TTC19-204ENST00000470399 TACC3Q9Y6A5 838 aa29.36■■■□□ 2.29
TTC19-204ENST00000470399 MYADML2A6NDP7 307 aa29.35■■■□□ 2.29
TTC19-204ENST00000470399 F5H6K3 240 aa29.35■■■□□ 2.29
TTC19-204ENST00000470399 ADCY6O43306 1168 aa29.35■■■□□ 2.29
TTC19-204ENST00000470399 PQBP1O60828 265 aaKnown RBP29.35■■■□□ 2.29
TTC19-204ENST00000470399 COPB2P35606 906 aa29.35■■■□□ 2.29
TTC19-204ENST00000470399 KLRC3Q07444 240 aa29.35■■■□□ 2.29
TTC19-204ENST00000470399 TSHZ3Q63HK5 1081 aa29.35■■■□□ 2.29
TTC19-204ENST00000470399 TEX13BQ9BXU2 312 aa29.35■■■□□ 2.29
TTC19-204ENST00000470399 FAAP100Q0VG06 881 aa29.34■■■□□ 2.29
TTC19-204ENST00000470399 MAMDC4Q6UXC1 1216 aa29.34■■■□□ 2.29
TTC19-204ENST00000470399 KBTBD3Q8NAB2 608 aa29.34■■■□□ 2.29
TTC19-204ENST00000470399 MYLIPQ8WY64 445 aa29.34■■■□□ 2.29
TTC19-204ENST00000470399 LRRC37A2A6NM11 1700 aa29.34■■■□□ 2.29
TTC19-204ENST00000470399 ECHDC1Q9NTX5 307 aa29.33■■■□□ 2.29
TTC19-204ENST00000470399 CNPY2Q9Y2B0 182 aa29.33■■■□□ 2.29
TTC19-204ENST00000470399 SYNGAP1Q96PV0 1343 aa29.33■■■□□ 2.29
TTC19-204ENST00000470399 LCTP09848 1927 aa29.33■■■□□ 2.29
TTC19-204ENST00000470399 MINDY4BA8MYZ0 360 aa29.32■■■□□ 2.28
TTC19-204ENST00000470399 ATP2A1O14983 1001 aa29.32■■■□□ 2.28
TTC19-204ENST00000470399 ACLYP53396 1101 aa29.32■■■□□ 2.28
TTC19-204ENST00000470399 GIMAP6Q6P9H5 292 aa29.32■■■□□ 2.28
TTC19-204ENST00000470399 ANKRD33Q7Z3H0 272 aa29.32■■■□□ 2.28
TTC19-204ENST00000470399 MSL3Q8N5Y2 521 aaKnown RBP29.32■■■□□ 2.28
TTC19-204ENST00000470399 TSEN34Q9BSV6 310 aaKnown RBP29.32■■■□□ 2.28
TTC19-204ENST00000470399 M0R2C6 588 aa29.31■■■□□ 2.28
TTC19-204ENST00000470399 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.31■■■□□ 2.28
TTC19-204ENST00000470399 MAFAQ8NHW3 353 aaPredicted RBP29.31■■■□□ 2.28
TTC19-204ENST00000470399 APPBP2Q92624 585 aa29.31■■■□□ 2.28
TTC19-204ENST00000470399 MKNK2Q9HBH9 465 aa29.31■■■□□ 2.28
TTC19-204ENST00000470399 PRDM1O75626 825 aa29.3■■■□□ 2.28
TTC19-204ENST00000470399 RAG1P15918 1043 aa29.3■■■□□ 2.28
TTC19-204ENST00000470399 KCNA10Q16322 511 aa29.3■■■□□ 2.28
TTC19-204ENST00000470399 CPXCR1Q8N123 301 aa29.3■■■□□ 2.28
TTC19-204ENST00000470399 PRPF38AQ8NAV1 312 aaKnown RBP29.3■■■□□ 2.28
TTC19-204ENST00000470399 RNPC3Q96LT9 517 aaKnown RBP29.3■■■□□ 2.28
TTC19-204ENST00000470399 TOX2Q96NM4 488 aa29.3■■■□□ 2.28
TTC19-204ENST00000470399 RAVER2Q9HCJ3 691 aaKnown RBP29.3■■■□□ 2.28
TTC19-204ENST00000470399 CLIP2Q9UDT6 1046 aa29.3■■■□□ 2.28
TTC19-204ENST00000470399 RCAN3Q9UKA8 241 aa29.3■■■□□ 2.28
TTC19-204ENST00000470399 ZHX1Q9UKY1 873 aaPredicted RBP29.3■■■□□ 2.28
TTC19-204ENST00000470399 MYO9BQ13459 2157 aa29.3■■■□□ 2.28
TTC19-204ENST00000470399 GPAA1O43292 621 aa29.29■■■□□ 2.28
TTC19-204ENST00000470399 MKL1Q969V6 931 aa29.29■■■□□ 2.28
TTC19-204ENST00000470399 CEP95Q96GE4 821 aa29.29■■■□□ 2.28
TTC19-204ENST00000470399 CHMP4BQ9H444 224 aaKnown RBP29.29■■■□□ 2.28
TTC19-204ENST00000470399 SLC38A10Q9HBR0 1119 aa29.29■■■□□ 2.28
TTC19-204ENST00000470399 STARD7Q9NQZ5 370 aa29.29■■■□□ 2.28
TTC19-204ENST00000470399 TMEM39AQ9NV64 488 aa29.29■■■□□ 2.28
TTC19-204ENST00000470399 FAM184BQ9ULE4 1060 aa29.29■■■□□ 2.28
TTC19-204ENST00000470399 GBF1Q92538 1859 aa29.29■■■□□ 2.28
TTC19-204ENST00000470399 RNF113AO15541 343 aaKnown RBP29.28■■■□□ 2.28
TTC19-204ENST00000470399 FPGSQ05932 587 aa29.28■■■□□ 2.28
TTC19-204ENST00000470399 DDX11Q96FC9 970 aa29.28■■■□□ 2.28
TTC19-204ENST00000470399 TBX21Q9UL17 535 aa29.28■■■□□ 2.28
TTC19-204ENST00000470399 CST5P28325 142 aaPredicted RBP29.27■■■□□ 2.28
TTC19-204ENST00000470399 SLC4A3P48751 1232 aa29.27■■■□□ 2.28
TTC19-204ENST00000470399 ZNF467Q7Z7K2 595 aaPredicted RBP29.27■■■□□ 2.28
TTC19-204ENST00000470399 LRRC47Q8N1G4 583 aaKnown RBP29.27■■■□□ 2.28
TTC19-204ENST00000470399 KIFC2Q96AC6 838 aa29.27■■■□□ 2.28
TTC19-204ENST00000470399 KATNBL1Q9H079 304 aa29.27■■■□□ 2.28
TTC19-204ENST00000470399 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.27■■■□□ 2.28
TTC19-204ENST00000470399 MTMR4Q9NYA4 1195 aa29.27■■■□□ 2.28
TTC19-204ENST00000470399 PLIN4Q96Q06 1357 aa29.26■■■□□ 2.28
TTC19-204ENST00000470399 MOXD2PA6NHM9 499 aa29.26■■■□□ 2.27
TTC19-204ENST00000470399 DUSP11O75319 330 aaKnown RBP29.26■■■□□ 2.27
TTC19-204ENST00000470399 ACVR2BQ13705 512 aa29.26■■■□□ 2.27
TTC19-204ENST00000470399 TTC28Q96AY4 2481 aa29.25■■■□□ 2.27
TTC19-204ENST00000470399 CTAGE5O15320 804 aa29.25■■■□□ 2.27
TTC19-204ENST00000470399 CDK7P50613 346 aa29.25■■■□□ 2.27
TTC19-204ENST00000470399 SEC62Q99442 399 aaKnown RBP29.25■■■□□ 2.27
TTC19-204ENST00000470399 UPF3AQ9H1J1 476 aaKnown RBP29.25■■■□□ 2.27
TTC19-204ENST00000470399 DCTPP1Q9H773 170 aa29.25■■■□□ 2.27
TTC19-204ENST00000470399 ZBED4O75132 1171 aa29.24■■■□□ 2.27
TTC19-204ENST00000470399 C16orf59Q7L2K0 433 aa29.24■■■□□ 2.27
TTC19-204ENST00000470399 NUP133Q8WUM0 1156 aa29.24■■■□□ 2.27
TTC19-204ENST00000470399 FEM1BQ9UK73 627 aa29.24■■■□□ 2.27
TTC19-204ENST00000470399 TMEM265A0A087WTH1 108 aa29.23■■■□□ 2.27
TTC19-204ENST00000470399 DCDC2CA8MYV0 355 aa29.23■■■□□ 2.27
TTC19-204ENST00000470399 TIMP1P01033 207 aa29.23■■■□□ 2.27
TTC19-204ENST00000470399 TDO2P48775 406 aa29.23■■■□□ 2.27
TTC19-204ENST00000470399 CCDC144BQ3MJ40 725 aa29.23■■■□□ 2.27
TTC19-204ENST00000470399 ARMCX2Q7L311 632 aa29.23■■■□□ 2.27
TTC19-204ENST00000470399 IFNL3Q8IZI9 196 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms