RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 MAP3K21Q5TCX8 1036 aa16.67■□□□□ 0.26
TOP3B-215ENST00000470338 FAM160B2Q86V87 743 aa16.67■□□□□ 0.26
TOP3B-215ENST00000470338 NCAPG2Q86XI2 1143 aa16.67■□□□□ 0.26
TOP3B-215ENST00000470338 CHURC1Q8WUH1 139 aa16.67■□□□□ 0.26
TOP3B-215ENST00000470338 MAP4K1Q92918 833 aa16.67■□□□□ 0.26
TOP3B-215ENST00000470338 SLC38A10Q9HBR0 1119 aa16.67■□□□□ 0.26
TOP3B-215ENST00000470338 PAK6Q9NQU5 681 aaPredicted RBP16.67■□□□□ 0.26
TOP3B-215ENST00000470338 SMCHD1A6NHR9 2005 aa16.66■□□□□ 0.26
TOP3B-215ENST00000470338 B4E1Z4 1266 aa16.66■□□□□ 0.26
TOP3B-215ENST00000470338 IGHA2P01877 340 aa16.66■□□□□ 0.26
TOP3B-215ENST00000470338 ZKSCAN1P17029 563 aaPredicted RBP16.66■□□□□ 0.26
TOP3B-215ENST00000470338 ADORA2AP29274 412 aa16.66■□□□□ 0.26
TOP3B-215ENST00000470338 COPB2P35606 906 aa16.66■□□□□ 0.26
TOP3B-215ENST00000470338 STAT2P52630 851 aa16.66■□□□□ 0.26
TOP3B-215ENST00000470338 CCL14Q16627 93 aa16.66■□□□□ 0.26
TOP3B-215ENST00000470338 CCDC178Q5BJE1 867 aa16.66■□□□□ 0.26
TOP3B-215ENST00000470338 DGKHQ86XP1 1220 aa16.66■□□□□ 0.26
TOP3B-215ENST00000470338 NPLOC4Q8TAT6 608 aa16.66■□□□□ 0.26
TOP3B-215ENST00000470338 DCAF4Q8WV16 495 aa16.66■□□□□ 0.26
TOP3B-215ENST00000470338 ANKS1AQ92625 1134 aa16.66■□□□□ 0.26
TOP3B-215ENST00000470338 KIFC2Q96AC6 838 aa16.66■□□□□ 0.26
TOP3B-215ENST00000470338 TEX13BQ9BXU2 312 aa16.66■□□□□ 0.26
TOP3B-215ENST00000470338 KRT23Q9C075 422 aa16.66■□□□□ 0.26
TOP3B-215ENST00000470338 CNNM2Q9H8M5 875 aa16.66■□□□□ 0.26
TOP3B-215ENST00000470338 ZSWIM5Q9P217 1185 aa16.66■□□□□ 0.26
TOP3B-215ENST00000470338 U3KPZ7 1027 aaPredicted RBP16.66■□□□□ 0.26
TOP3B-215ENST00000470338 RPTORQ8N122 1335 aa16.66■□□□□ 0.26
TOP3B-215ENST00000470338 SGPL1O95470 568 aa16.65■□□□□ 0.26
TOP3B-215ENST00000470338 CYP21A2P08686 494 aa16.65■□□□□ 0.26
TOP3B-215ENST00000470338 FCER1AP12319 257 aa16.65■□□□□ 0.26
TOP3B-215ENST00000470338 CAPN2P17655 700 aa16.65■□□□□ 0.26
TOP3B-215ENST00000470338 OAZ1P54368 228 aa16.65■□□□□ 0.26
TOP3B-215ENST00000470338 KCTD1Q719H9 257 aa16.65■□□□□ 0.26
TOP3B-215ENST00000470338 IQCA1Q86XH1 822 aa16.65■□□□□ 0.26
TOP3B-215ENST00000470338 SHISA4Q96DD7 197 aa16.65■□□□□ 0.26
TOP3B-215ENST00000470338 ZKSCAN3Q9BRR0 538 aa16.65■□□□□ 0.26
TOP3B-215ENST00000470338 HMX1Q9NP08 348 aaPredicted RBP16.65■□□□□ 0.26
TOP3B-215ENST00000470338 FLRT1Q9NZU1 646 aa16.65■□□□□ 0.26
TOP3B-215ENST00000470338 COBLO75128 1261 aa16.64■□□□□ 0.25
TOP3B-215ENST00000470338 CENPBP07199 599 aaPredicted RBP16.64■□□□□ 0.25
TOP3B-215ENST00000470338 CACNB2Q08289 660 aaPredicted RBP16.64■□□□□ 0.25
TOP3B-215ENST00000470338 ERICH6BQ5W0A0 696 aa16.64■□□□□ 0.25
TOP3B-215ENST00000470338 SNRNP48Q6IEG0 339 aaKnown RBP16.64■□□□□ 0.25
TOP3B-215ENST00000470338 BTNL9Q6UXG8 535 aa16.64■□□□□ 0.25
TOP3B-215ENST00000470338 RASGRP2Q7LDG7 609 aa16.64■□□□□ 0.25
TOP3B-215ENST00000470338 DPP9Q86TI2 863 aa16.64■□□□□ 0.25
TOP3B-215ENST00000470338 U2AF1L4Q8WU68 220 aaKnown RBP16.64■□□□□ 0.25
TOP3B-215ENST00000470338 CHMP4CQ96CF2 233 aa16.64■□□□□ 0.25
TOP3B-215ENST00000470338 ZSCAN10Q96SZ4 725 aaPredicted RBP16.64■□□□□ 0.25
TOP3B-215ENST00000470338 ESYT1Q9BSJ8 1104 aa16.64■□□□□ 0.25
TOP3B-215ENST00000470338 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.64■□□□□ 0.25
TOP3B-215ENST00000470338 RIPK3Q9Y572 518 aa16.64■□□□□ 0.25
TOP3B-215ENST00000470338 SNHG28P0DPA3 235 aa16.63■□□□□ 0.25
TOP3B-215ENST00000470338 PDHBP11177 359 aa16.63■□□□□ 0.25
TOP3B-215ENST00000470338 PRKAR2AP13861 404 aaKnown RBP16.63■□□□□ 0.25
TOP3B-215ENST00000470338 OLFML2BQ68BL8 750 aa16.63■□□□□ 0.25
TOP3B-215ENST00000470338 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.63■□□□□ 0.25
TOP3B-215ENST00000470338 CPXCR1Q8N123 301 aa16.63■□□□□ 0.25
TOP3B-215ENST00000470338 DEFB118Q96PH6 123 aa16.63■□□□□ 0.25
TOP3B-215ENST00000470338 LSG1Q9H089 658 aaKnown RBP16.63■□□□□ 0.25
TOP3B-215ENST00000470338 CRISPLD2Q9H0B8 497 aa16.63■□□□□ 0.25
TOP3B-215ENST00000470338 RAVER2Q9HCJ3 691 aaKnown RBP16.63■□□□□ 0.25
TOP3B-215ENST00000470338 SLC5A4Q9NY91 659 aa16.63■□□□□ 0.25
TOP3B-215ENST00000470338 PRR12Q9ULL5 1215 aa16.63■□□□□ 0.25
TOP3B-215ENST00000470338 ISY1Q9ULR0 285 aaKnown RBP16.63■□□□□ 0.25
TOP3B-215ENST00000470338 MTMR7Q9Y216 660 aa16.63■□□□□ 0.25
TOP3B-215ENST00000470338 CTDP1Q9Y5B0 961 aaPredicted RBP16.63■□□□□ 0.25
TOP3B-215ENST00000470338 IKQ13123 557 aaPredicted RBP16.62■□□□□ 0.25
TOP3B-215ENST00000470338 MFSD14CQ5VZR4 134 aa16.62■□□□□ 0.25
TOP3B-215ENST00000470338 KIAA1211Q6ZU35 1233 aa16.62■□□□□ 0.25
TOP3B-215ENST00000470338 ENAHQ8N8S7 591 aaPredicted RBP16.62■□□□□ 0.25
TOP3B-215ENST00000470338 MMP19Q99542 508 aa16.62■□□□□ 0.25
TOP3B-215ENST00000470338 RBM8AQ9Y5S9 174 aaKnown RBP16.62■□□□□ 0.25
TOP3B-215ENST00000470338 ZNF536O15090 1300 aa16.62■□□□□ 0.25
TOP3B-215ENST00000470338 FRMPD3Q5JV73 1810 aa16.61■□□□□ 0.25
TOP3B-215ENST00000470338 E7EWF7 191 aa16.61■□□□□ 0.25
TOP3B-215ENST00000470338 ZNF543Q08ER8 600 aa16.61■□□□□ 0.25
TOP3B-215ENST00000470338 TRDNQ13061 729 aa16.61■□□□□ 0.25
TOP3B-215ENST00000470338 KCTD2Q14681 263 aa16.61■□□□□ 0.25
TOP3B-215ENST00000470338 CCDC96Q2M329 555 aa16.61■□□□□ 0.25
TOP3B-215ENST00000470338 TTBK2Q6IQ55 1244 aa16.61■□□□□ 0.25
TOP3B-215ENST00000470338 UBE2Q1Q7Z7E8 422 aa16.61■□□□□ 0.25
TOP3B-215ENST00000470338 CHST13Q8NET6 341 aa16.61■□□□□ 0.25
TOP3B-215ENST00000470338 DIS3Q9Y2L1 958 aaKnown RBP16.61■□□□□ 0.25
TOP3B-215ENST00000470338 TAF6LQ9Y6J9 622 aa16.61■□□□□ 0.25
TOP3B-215ENST00000470338 TNKSO95271 1327 aa16.61■□□□□ 0.25
TOP3B-215ENST00000470338 TFRCP02786 760 aaKnown RBP16.6■□□□□ 0.25
TOP3B-215ENST00000470338 SEC23AQ15436 765 aa16.6■□□□□ 0.25
TOP3B-215ENST00000470338 ZNF792Q3KQV3 632 aa16.6■□□□□ 0.25
TOP3B-215ENST00000470338 CYB5R4Q7L1T6 521 aa16.6■□□□□ 0.25
TOP3B-215ENST00000470338 PNMA1Q8ND90 353 aa16.6■□□□□ 0.25
TOP3B-215ENST00000470338 MAML3Q96JK9 1138 aa16.6■□□□□ 0.25
TOP3B-215ENST00000470338 UBAC1Q9BSL1 405 aa16.6■□□□□ 0.25
TOP3B-215ENST00000470338 KAT14Q9H8E8 782 aa16.6■□□□□ 0.25
TOP3B-215ENST00000470338 GPCPD1Q9NPB8 672 aa16.6■□□□□ 0.25
TOP3B-215ENST00000470338 PPP4R2Q9NY27 417 aa16.6■□□□□ 0.25
TOP3B-215ENST00000470338 FBXO40Q9UH90 709 aa16.6■□□□□ 0.25
TOP3B-215ENST00000470338 FRMPD2Q68DX3 1309 aaPredicted RBP16.6■□□□□ 0.25
TOP3B-215ENST00000470338 MYH6P13533 1939 aa16.59■□□□□ 0.25
TOP3B-215ENST00000470338 DNAJC25-GNG10A0A024R161 153 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms