RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 CLIP2Q9UDT6 1046 aa15.14■□□□□ 0.01
GAPVD1-214ENST00000469528 FEM1BQ9UK73 627 aa15.14■□□□□ 0.01
GAPVD1-214ENST00000469528 RCAN3Q9UKA8 241 aa15.14■□□□□ 0.01
GAPVD1-214ENST00000469528 FRMPD3Q5JV73 1810 aa15.14■□□□□ 0.01
GAPVD1-214ENST00000469528 MYH8P13535 1937 aa15.13■□□□□ 0.01
GAPVD1-214ENST00000469528 TMEM265A0A087WTH1 108 aa15.13■□□□□ 0.01
GAPVD1-214ENST00000469528 A0A1W2PQ45 241 aaPredicted RBP15.13■□□□□ 0.01
GAPVD1-214ENST00000469528 A0A1W2PQY0 241 aa15.13■□□□□ 0.01
GAPVD1-214ENST00000469528 KIAA0355O15063 1070 aa15.13■□□□□ 0.01
GAPVD1-214ENST00000469528 RNF113AO15541 343 aaKnown RBP15.13■□□□□ 0.01
GAPVD1-214ENST00000469528 SLC3A2P08195 630 aaKnown RBP15.13■□□□□ 0.01
GAPVD1-214ENST00000469528 PPP4R3BQ5MIZ7 849 aa15.13■□□□□ 0.01
GAPVD1-214ENST00000469528 ANKRD33Q7Z3H0 272 aa15.13■□□□□ 0.01
GAPVD1-214ENST00000469528 KBTBD3Q8NAB2 608 aa15.13■□□□□ 0.01
GAPVD1-214ENST00000469528 APPBP2Q92624 585 aa15.13■□□□□ 0.01
GAPVD1-214ENST00000469528 MKL1Q969V6 931 aa15.13■□□□□ 0.01
GAPVD1-214ENST00000469528 CDX2Q99626 313 aaPredicted RBP15.13■□□□□ 0.01
GAPVD1-214ENST00000469528 NACAP1Q9BZK3 213 aa15.13■□□□□ 0.01
GAPVD1-214ENST00000469528 STARD7Q9NQZ5 370 aa15.13■□□□□ 0.01
GAPVD1-214ENST00000469528 RLFQ13129 1914 aa15.13■□□□□ 0.01
GAPVD1-214ENST00000469528 MROH7Q68CQ1 1323 aa15.13■□□□□ 0.01
GAPVD1-214ENST00000469528 GSG1L2A8MUP6 293 aa15.12■□□□□ 0.01
GAPVD1-214ENST00000469528 PATL2C9JE40 543 aaKnown RBP15.12■□□□□ 0.01
GAPVD1-214ENST00000469528 PQBP1O60828 265 aaKnown RBP15.12■□□□□ 0.01
GAPVD1-214ENST00000469528 DUSP11O75319 330 aaKnown RBP15.12■□□□□ 0.01
GAPVD1-214ENST00000469528 RASA1P20936 1047 aa15.12■□□□□ 0.01
GAPVD1-214ENST00000469528 SLC4A3P48751 1232 aa15.12■□□□□ 0.01
GAPVD1-214ENST00000469528 TDO2P48775 406 aa15.12■□□□□ 0.01
GAPVD1-214ENST00000469528 ACLYP53396 1101 aa15.12■□□□□ 0.01
GAPVD1-214ENST00000469528 OAZ1P54368 228 aa15.12■□□□□ 0.01
GAPVD1-214ENST00000469528 FPGSQ05932 587 aa15.12■□□□□ 0.01
GAPVD1-214ENST00000469528 PDE4BQ07343 736 aa15.12■□□□□ 0.01
GAPVD1-214ENST00000469528 C9orf50Q5SZB4 431 aa15.12■□□□□ 0.01
GAPVD1-214ENST00000469528 SH3RF1Q7Z6J0 888 aa15.12■□□□□ 0.01
GAPVD1-214ENST00000469528 ANKRD35Q8N283 1001 aa15.12■□□□□ 0.01
GAPVD1-214ENST00000469528 CHST13Q8NET6 341 aa15.12■□□□□ 0.01
GAPVD1-214ENST00000469528 REPS2Q8NFH8 660 aa15.12■□□□□ 0.01
GAPVD1-214ENST00000469528 VTI1AQ96AJ9 217 aa15.12■□□□□ 0.01
GAPVD1-214ENST00000469528 RNPC3Q96LT9 517 aaKnown RBP15.12■□□□□ 0.01
GAPVD1-214ENST00000469528 GLT1D1Q96MS3 346 aa15.12■□□□□ 0.01
GAPVD1-214ENST00000469528 ABHD16BQ9H3Z7 469 aa15.12■□□□□ 0.01
GAPVD1-214ENST00000469528 ELP1O95163 1332 aa15.12■□□□□ 0.01
GAPVD1-214ENST00000469528 ROBO3Q96MS0 1386 aa15.11■□□□□ 0.01
GAPVD1-214ENST00000469528 SMCHD1A6NHR9 2005 aa15.11■□□□□ 0.01
GAPVD1-214ENST00000469528 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.11■□□□□ 0.01
GAPVD1-214ENST00000469528 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.11■□□□□ 0.01
GAPVD1-214ENST00000469528 TTLL1O95922 423 aa15.11■□□□□ 0.01
GAPVD1-214ENST00000469528 TAL1P17542 331 aaPredicted RBP15.11■□□□□ 0.01
GAPVD1-214ENST00000469528 ACVR2BQ13705 512 aa15.11■□□□□ 0.01
GAPVD1-214ENST00000469528 KCNA10Q16322 511 aa15.11■□□□□ 0.01
GAPVD1-214ENST00000469528 CPXCR1Q8N123 301 aa15.11■□□□□ 0.01
GAPVD1-214ENST00000469528 KIFC2Q96AC6 838 aa15.11■□□□□ 0.01
GAPVD1-214ENST00000469528 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.11■□□□□ 0.01
GAPVD1-214ENST00000469528 A0A0G2JMZ2 1700 aa15.11■□□□□ 0.01
GAPVD1-214ENST00000469528 BAZ2AQ9UIF9 1905 aaKnown RBP15.1■□□□□ 0.01
GAPVD1-214ENST00000469528 DNAJC25-GNG10A0A024R161 153 aa15.1■□□□□ 0.01
GAPVD1-214ENST00000469528 SMIM22K7EJ46 135 aa15.1■□□□□ 0.01
GAPVD1-214ENST00000469528 ERC2O15083 957 aa15.1■□□□□ 0.01
GAPVD1-214ENST00000469528 ADAMTS4O75173 837 aa15.1■□□□□ 0.01
GAPVD1-214ENST00000469528 NDUFB10O96000 172 aa15.1■□□□□ 0.01
GAPVD1-214ENST00000469528 TIMP1P01033 207 aa15.1■□□□□ 0.01
GAPVD1-214ENST00000469528 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.1■□□□□ 0.01
GAPVD1-214ENST00000469528 STK11IPQ8N1F8 1099 aa15.1■□□□□ 0.01
GAPVD1-214ENST00000469528 GMCL1P1Q8NEA9 526 aa15.1■□□□□ 0.01
GAPVD1-214ENST00000469528 KLHDC9Q8NEP7 349 aa15.1■□□□□ 0.01
GAPVD1-214ENST00000469528 CHURC1Q8WUH1 139 aa15.1■□□□□ 0.01
GAPVD1-214ENST00000469528 DCTPP1Q9H773 170 aa15.1■□□□□ 0.01
GAPVD1-214ENST00000469528 SLC38A10Q9HBR0 1119 aa15.1■□□□□ 0.01
GAPVD1-214ENST00000469528 MTMR4Q9NYA4 1195 aa15.1■□□□□ 0.01
GAPVD1-214ENST00000469528 ZHX1Q9UKY1 873 aaPredicted RBP15.1■□□□□ 0.01
GAPVD1-214ENST00000469528 TLR3O15455 904 aaKnown RBP15.09■□□□□ 0.01
GAPVD1-214ENST00000469528 SMARCA5O60264 1052 aaPredicted RBP15.09■□□□□ 0.01
GAPVD1-214ENST00000469528 SNAI1O95863 264 aaPredicted RBP15.09■□□□□ 0.01
GAPVD1-214ENST00000469528 TSPY3P0CV98 308 aa15.09■□□□□ 0.01
GAPVD1-214ENST00000469528 TSPY8P0CW00 308 aa15.09■□□□□ 0.01
GAPVD1-214ENST00000469528 FAAP100Q0VG06 881 aa15.09■□□□□ 0.01
GAPVD1-214ENST00000469528 MAFAQ8NHW3 353 aaPredicted RBP15.09■□□□□ 0.01
GAPVD1-214ENST00000469528 SYMPKQ92797 1274 aaKnown RBP15.09■□□□□ 0.01
GAPVD1-214ENST00000469528 OSBP2Q969R2 916 aa15.09■□□□□ 0.01
GAPVD1-214ENST00000469528 NUP88Q99567 741 aaPredicted RBP15.09■□□□□ 0.01
GAPVD1-214ENST00000469528 SEZ6LQ9BYH1 1024 aa15.09■□□□□ 0.01
GAPVD1-214ENST00000469528 RIPK3Q9Y572 518 aa15.09■□□□□ 0.01
GAPVD1-214ENST00000469528 LAMA2P24043 3122 aaKnown RBP15.09■□□□□ 0.01
GAPVD1-214ENST00000469528 GPAA1O43292 621 aa15.08■□□□□ 0
GAPVD1-214ENST00000469528 CHGBP05060 677 aa15.08■□□□□ 0
GAPVD1-214ENST00000469528 C6orf222P0C671 652 aaPredicted RBP15.08■□□□□ 0
GAPVD1-214ENST00000469528 BMP3P12645 472 aa15.08■□□□□ 0
GAPVD1-214ENST00000469528 CST5P28325 142 aaPredicted RBP15.08■□□□□ 0
GAPVD1-214ENST00000469528 GNASQ5JWF2 1037 aa15.08■□□□□ 0
GAPVD1-214ENST00000469528 FAM160B2Q86V87 743 aa15.08■□□□□ 0
GAPVD1-214ENST00000469528 IFNL3Q8IZI9 196 aa15.08■□□□□ 0
GAPVD1-214ENST00000469528 TMEM199Q8N511 208 aa15.08■□□□□ 0
GAPVD1-214ENST00000469528 COL25A1Q9BXS0 654 aaPredicted RBP15.08■□□□□ 0
GAPVD1-214ENST00000469528 RAVER2Q9HCJ3 691 aaKnown RBP15.08■□□□□ 0
GAPVD1-214ENST00000469528 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.08■□□□□ 0
GAPVD1-214ENST00000469528 SYNRGQ9UMZ2 1314 aa15.08■□□□□ 0
GAPVD1-214ENST00000469528 IGKV6D-41A0A0C4DH26 115 aa15.07■□□□□ 0
GAPVD1-214ENST00000469528 A0A0U1RQG5 324 aaPredicted RBP15.07■□□□□ 0
GAPVD1-214ENST00000469528 ASB14A6NK59 587 aa15.07■□□□□ 0
GAPVD1-214ENST00000469528 ZEB2O60315 1214 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms