RNA–Protein interactions for RNA: ENST00000469400.1

TRAPPC12-216, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-216ENST00000469400 MBD4O95243 580 aa15.45■□□□□ 0.06
TRAPPC12-216ENST00000469400 CDK7P50613 346 aa15.45■□□□□ 0.06
TRAPPC12-216ENST00000469400 PPIGQ13427 754 aaKnown RBP eCLIP15.45■□□□□ 0.061e-8■■■■■ 35
TRAPPC12-216ENST00000469400 AKNAD1Q5T1N1 836 aa15.45■□□□□ 0.06
TRAPPC12-216ENST00000469400 RASIP1Q5U651 963 aa15.45■□□□□ 0.06
TRAPPC12-216ENST00000469400 CCDC174Q6PII3 467 aa15.45■□□□□ 0.06
TRAPPC12-216ENST00000469400 MAMDC4Q6UXC1 1216 aa15.45■□□□□ 0.06
TRAPPC12-216ENST00000469400 CCDC129Q6ZRS4 1044 aa15.45■□□□□ 0.06
TRAPPC12-216ENST00000469400 C16orf86Q6ZW13 317 aa15.45■□□□□ 0.06
TRAPPC12-216ENST00000469400 ATXN2LQ8WWM7 1075 aaKnown RBP15.45■□□□□ 0.06
TRAPPC12-216ENST00000469400 GLT1D1Q96MS3 346 aa15.45■□□□□ 0.06
TRAPPC12-216ENST00000469400 PRDM12Q9H4Q4 367 aa15.45■□□□□ 0.06
TRAPPC12-216ENST00000469400 GOPCQ9HD26 462 aa15.45■□□□□ 0.06
TRAPPC12-216ENST00000469400 ZHX1Q9UKY1 873 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC12-216ENST00000469400 MROH7Q68CQ1 1323 aa15.44■□□□□ 0.06
TRAPPC12-216ENST00000469400 DUSP11O75319 330 aaKnown RBP15.44■□□□□ 0.06
TRAPPC12-216ENST00000469400 CSF2RAP15509 400 aa15.44■□□□□ 0.06
TRAPPC12-216ENST00000469400 CST5P28325 142 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC12-216ENST00000469400 IRX5P78411 483 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC12-216ENST00000469400 HSP90AB4PQ58FF6 505 aa15.44■□□□□ 0.06
TRAPPC12-216ENST00000469400 DDX11Q96FC9 970 aa15.44■□□□□ 0.06
TRAPPC12-216ENST00000469400 ASB2Q96Q27 587 aa15.44■□□□□ 0.06
TRAPPC12-216ENST00000469400 PARP14Q460N5 1801 aa15.44■□□□□ 0.06
TRAPPC12-216ENST00000469400 COL11A1P12107 1806 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC12-216ENST00000469400 NCOR1O75376 2440 aa15.43■□□□□ 0.06
TRAPPC12-216ENST00000469400 DNAJC25-GNG10A0A024R161 153 aa15.43■□□□□ 0.06
TRAPPC12-216ENST00000469400 ASGR1P07306 291 aa15.43■□□□□ 0.06
TRAPPC12-216ENST00000469400 ACRP10323 421 aa15.43■□□□□ 0.06
TRAPPC12-216ENST00000469400 ADD2P35612 726 aa15.43■□□□□ 0.06
TRAPPC12-216ENST00000469400 SNRNP48Q6IEG0 339 aaKnown RBP15.43■□□□□ 0.06
TRAPPC12-216ENST00000469400 ZNF365Q70YC5 407 aa15.43■□□□□ 0.06
TRAPPC12-216ENST00000469400 AMOTL1Q8IY63 956 aa15.43■□□□□ 0.06
TRAPPC12-216ENST00000469400 CLASRPQ8N2M8 674 aaKnown RBP15.43■□□□□ 0.06
TRAPPC12-216ENST00000469400 TMEM199Q8N511 208 aa15.43■□□□□ 0.06
TRAPPC12-216ENST00000469400 PCSK9Q8NBP7 692 aaKnown RBP15.43■□□□□ 0.06
TRAPPC12-216ENST00000469400 VTI1AQ96AJ9 217 aa15.43■□□□□ 0.06
TRAPPC12-216ENST00000469400 SLF1Q9BQI6 1058 aa15.43■□□□□ 0.06
TRAPPC12-216ENST00000469400 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.43■□□□□ 0.06
TRAPPC12-216ENST00000469400 TEX13BQ9BXU2 312 aa15.43■□□□□ 0.06
TRAPPC12-216ENST00000469400 THEGQ9P2T0 379 aa15.43■□□□□ 0.06
TRAPPC12-216ENST00000469400 RAPGEFL1Q9UHV5 662 aa15.43■□□□□ 0.06
TRAPPC12-216ENST00000469400 RIPK3Q9Y572 518 aa15.43■□□□□ 0.06
TRAPPC12-216ENST00000469400 MYO9BQ13459 2157 aa15.43■□□□□ 0.06
TRAPPC12-216ENST00000469400 ARVCFO00192 962 aa15.42■□□□□ 0.06
TRAPPC12-216ENST00000469400 APBB1O00213 710 aa15.42■□□□□ 0.06
TRAPPC12-216ENST00000469400 ADCY6O43306 1168 aa15.42■□□□□ 0.06
TRAPPC12-216ENST00000469400 CHGBP05060 677 aa15.42■□□□□ 0.06
TRAPPC12-216ENST00000469400 IFIT2P09913 472 aaKnown RBP15.42■□□□□ 0.06
TRAPPC12-216ENST00000469400 C6orf222P0C671 652 aaPredicted RBP15.42■□□□□ 0.06
TRAPPC12-216ENST00000469400 ACVR2BQ13705 512 aa15.42■□□□□ 0.06
TRAPPC12-216ENST00000469400 ADGRE1Q14246 886 aa15.42■□□□□ 0.06
TRAPPC12-216ENST00000469400 NUP88Q99567 741 aaPredicted RBP15.42■□□□□ 0.06
TRAPPC12-216ENST00000469400 PLXNA1Q9UIW2 1896 aa15.42■□□□□ 0.06
TRAPPC12-216ENST00000469400 A0A0U1RQG5 324 aaPredicted RBP15.41■□□□□ 0.06
TRAPPC12-216ENST00000469400 MRPS5P82675 430 aaKnown RBP15.41■□□□□ 0.06
TRAPPC12-216ENST00000469400 CCDC85BQ15834 202 aaPredicted RBP15.41■□□□□ 0.06
TRAPPC12-216ENST00000469400 CTR9Q6PD62 1173 aa15.41■□□□□ 0.06
TRAPPC12-216ENST00000469400 PSRC1Q6PGN9 363 aaPredicted RBP15.41■□□□□ 0.06
TRAPPC12-216ENST00000469400 ZNF467Q7Z7K2 595 aaPredicted RBP15.41■□□□□ 0.06
TRAPPC12-216ENST00000469400 FAM126BQ8IXS8 530 aa15.41■□□□□ 0.06
TRAPPC12-216ENST00000469400 ADAMTS19Q8TE59 1207 aa15.41■□□□□ 0.06
TRAPPC12-216ENST00000469400 DDRGK1Q96HY6 314 aa15.41■□□□□ 0.06
TRAPPC12-216ENST00000469400 PPP1R12CQ9BZL4 782 aa15.41■□□□□ 0.06
TRAPPC12-216ENST00000469400 BCL11AQ9H165 835 aa15.41■□□□□ 0.06
TRAPPC12-216ENST00000469400 UPF3AQ9H1J1 476 aaKnown RBP15.41■□□□□ 0.06
TRAPPC12-216ENST00000469400 BOLA2Q9H3K6 86 aa15.41■□□□□ 0.06
TRAPPC12-216ENST00000469400 SPC25Q9HBM1 224 aa15.41■□□□□ 0.06
TRAPPC12-216ENST00000469400 PAG1Q9NWQ8 432 aa15.41■□□□□ 0.06
TRAPPC12-216ENST00000469400 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.41■□□□□ 0.06
TRAPPC12-216ENST00000469400 CCER2I3L3R5 266 aa15.4■□□□□ 0.06
TRAPPC12-216ENST00000469400 IGFBP4P22692 258 aa15.4■□□□□ 0.06
TRAPPC12-216ENST00000469400 SLC4A3P48751 1232 aa15.4■□□□□ 0.06
TRAPPC12-216ENST00000469400 GJA9P57773 515 aa15.4■□□□□ 0.06
TRAPPC12-216ENST00000469400 CCDC144BQ3MJ40 725 aa15.4■□□□□ 0.06
TRAPPC12-216ENST00000469400 GNASQ5JWF2 1037 aa15.4■□□□□ 0.06
TRAPPC12-216ENST00000469400 CPXCR1Q8N123 301 aa15.4■□□□□ 0.06
TRAPPC12-216ENST00000469400 KIF1BPQ96EK5 621 aa15.4■□□□□ 0.06
TRAPPC12-216ENST00000469400 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.4■□□□□ 0.06
TRAPPC12-216ENST00000469400 ABHD16BQ9H3Z7 469 aa15.4■□□□□ 0.06
TRAPPC12-216ENST00000469400 MSRAQ9UJ68 235 aa15.4■□□□□ 0.06
TRAPPC12-216ENST00000469400 SLC4A4Q9Y6R1 1079 aa15.4■□□□□ 0.06
TRAPPC12-216ENST00000469400 ZBED9Q6R2W3 1325 aa15.4■□□□□ 0.06
TRAPPC12-216ENST00000469400 MYH8P13535 1937 aa15.39■□□□□ 0.05
TRAPPC12-216ENST00000469400 F5H6K3 240 aa15.39■□□□□ 0.05
TRAPPC12-216ENST00000469400 ATP2A1O14983 1001 aa15.39■□□□□ 0.05
TRAPPC12-216ENST00000469400 CTAGE5O15320 804 aa15.39■□□□□ 0.05
TRAPPC12-216ENST00000469400 TLR3O15455 904 aaKnown RBP15.39■□□□□ 0.05
TRAPPC12-216ENST00000469400 NDUFB10O96000 172 aa15.39■□□□□ 0.05
TRAPPC12-216ENST00000469400 CYP2C18P33260 490 aa15.39■□□□□ 0.05
TRAPPC12-216ENST00000469400 KLRC3Q07444 240 aa15.39■□□□□ 0.05
TRAPPC12-216ENST00000469400 RAB30Q15771 203 aa15.39■□□□□ 0.05
TRAPPC12-216ENST00000469400 PRPF38AQ8NAV1 312 aaKnown RBP15.39■□□□□ 0.05
TRAPPC12-216ENST00000469400 HERVK_113Q902F9 699 aa15.39■□□□□ 0.05
TRAPPC12-216ENST00000469400 FGD4Q96M96 766 aa15.39■□□□□ 0.05
TRAPPC12-216ENST00000469400 UHRF1Q96T88 793 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC12-216ENST00000469400 IL23AQ9NPF7 189 aa15.39■□□□□ 0.05
TRAPPC12-216ENST00000469400 CXXC1Q9P0U4 656 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC12-216ENST00000469400 BAZ2AQ9UIF9 1905 aaKnown RBP15.39■□□□□ 0.05
TRAPPC12-216ENST00000469400 ZBED4O75132 1171 aa15.38■□□□□ 0.05
TRAPPC12-216ENST00000469400 CD4P01730 458 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms