RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 PYM1Q9BRP8 204 aaKnown RBP10.68□□□□□ -0.7
SMC1A-205ENST00000469129 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.68□□□□□ -0.7
SMC1A-205ENST00000469129 FBXO2Q9UK22 296 aaPredicted RBP10.68□□□□□ -0.7
SMC1A-205ENST00000469129 HPSEQ9Y251 543 aa10.68□□□□□ -0.7
SMC1A-205ENST00000469129 PCDHB6Q9Y5E3 794 aa10.68□□□□□ -0.7
SMC1A-205ENST00000469129 SRPRBQ9Y5M8 271 aaKnown RBP10.68□□□□□ -0.7
SMC1A-205ENST00000469129 CNTNAP1P78357 1384 aa10.67□□□□□ -0.7
SMC1A-205ENST00000469129 FRMPD2Q68DX3 1309 aaPredicted RBP10.67□□□□□ -0.7
SMC1A-205ENST00000469129 TCP10L2B9ZVM9 353 aa10.67□□□□□ -0.7
SMC1A-205ENST00000469129 LAD1O00515 517 aa10.67□□□□□ -0.7
SMC1A-205ENST00000469129 ZNF202O95125 648 aa10.67□□□□□ -0.7
SMC1A-205ENST00000469129 PIK3AP1Q6ZUJ8 805 aa10.67□□□□□ -0.7
SMC1A-205ENST00000469129 ARHGAP27Q6ZUM4 889 aa10.67□□□□□ -0.7
SMC1A-205ENST00000469129 HOMER1Q86YM7 354 aa10.67□□□□□ -0.7
SMC1A-205ENST00000469129 CKAP2LQ8IYA6 745 aa10.67□□□□□ -0.7
SMC1A-205ENST00000469129 ELOA2Q8IYF1 753 aaPredicted RBP10.67□□□□□ -0.7
SMC1A-205ENST00000469129 RNF214Q8ND24 703 aa10.67□□□□□ -0.7
SMC1A-205ENST00000469129 GMCL1P1Q8NEA9 526 aa10.67□□□□□ -0.7
SMC1A-205ENST00000469129 ZBED3Q96IU2 234 aaPredicted RBP10.67□□□□□ -0.7
SMC1A-205ENST00000469129 PPP1R9BQ96SB3 815 aa10.67□□□□□ -0.7
SMC1A-205ENST00000469129 NAT10Q9H0A0 1025 aaKnown RBP10.67□□□□□ -0.7
SMC1A-205ENST00000469129 ZMYND12Q9H0C1 365 aa10.67□□□□□ -0.7
SMC1A-205ENST00000469129 GLT8D2Q9H1C3 349 aa10.67□□□□□ -0.7
SMC1A-205ENST00000469129 SH2D4AQ9H788 454 aa10.67□□□□□ -0.7
SMC1A-205ENST00000469129 VEZTQ9HBM0 779 aa10.67□□□□□ -0.7
SMC1A-205ENST00000469129 ARHGEF10LQ9HCE6 1279 aa10.67□□□□□ -0.7
SMC1A-205ENST00000469129 MYOZ2Q9NPC6 264 aa10.67□□□□□ -0.7
SMC1A-205ENST00000469129 ANO10Q9NW15 660 aa10.67□□□□□ -0.7
SMC1A-205ENST00000469129 MRVI1Q9Y6F6 885 aa10.67□□□□□ -0.7
SMC1A-205ENST00000469129 PARP14Q460N5 1801 aa10.67□□□□□ -0.7
SMC1A-205ENST00000469129 PNMA6FA0A0J9YX94 578 aa10.66□□□□□ -0.7
SMC1A-205ENST00000469129 CLRN2A0PK11 232 aa10.66□□□□□ -0.7
SMC1A-205ENST00000469129 TBC1D12O60347 775 aa10.66□□□□□ -0.7
SMC1A-205ENST00000469129 EEF2P13639 858 aaKnown RBP10.66□□□□□ -0.7
SMC1A-205ENST00000469129 ATP2B1P20020 1258 aa10.66□□□□□ -0.7
SMC1A-205ENST00000469129 ADCY7P51828 1080 aa10.66□□□□□ -0.7
SMC1A-205ENST00000469129 ZNF280AP59817 542 aaPredicted RBP10.66□□□□□ -0.7
SMC1A-205ENST00000469129 ATP2C1P98194 919 aaPredicted RBP10.66□□□□□ -0.7
SMC1A-205ENST00000469129 NONOQ15233 471 aaKnown RBP eCLIP10.66□□□□□ -0.7
SMC1A-205ENST00000469129 SLC35G1Q2M3R5 365 aa10.66□□□□□ -0.7
SMC1A-205ENST00000469129 ARL6IP4Q66PJ3 421 aaKnown RBP10.66□□□□□ -0.7
SMC1A-205ENST00000469129 KANK3Q6NY19 840 aa10.66□□□□□ -0.7
SMC1A-205ENST00000469129 SHC4Q6S5L8 630 aa10.66□□□□□ -0.7
SMC1A-205ENST00000469129 CLEC10AQ8IUN9 316 aa10.66□□□□□ -0.7
SMC1A-205ENST00000469129 CEP57L1Q8IYX8 460 aa10.66□□□□□ -0.7
SMC1A-205ENST00000469129 REXO1Q8N1G1 1221 aaKnown RBP10.66□□□□□ -0.7
SMC1A-205ENST00000469129 ZNF784Q8NCA9 323 aaPredicted RBP10.66□□□□□ -0.7
SMC1A-205ENST00000469129 GMCL1Q96IK5 515 aa10.66□□□□□ -0.7
SMC1A-205ENST00000469129 PIGSQ96S52 555 aa10.66□□□□□ -0.7
SMC1A-205ENST00000469129 USP25Q9UHP3 1055 aa10.66□□□□□ -0.7
SMC1A-205ENST00000469129 ZBTB12Q9Y330 459 aaPredicted RBP10.66□□□□□ -0.7
SMC1A-205ENST00000469129 FAM205CA6NFA0 338 aa10.65□□□□□ -0.7
SMC1A-205ENST00000469129 SMCO2A6NFE2 343 aa10.65□□□□□ -0.7
SMC1A-205ENST00000469129 FAM196BA6NMK8 535 aa10.65□□□□□ -0.7
SMC1A-205ENST00000469129 M0R2N6 131 aa10.65□□□□□ -0.7
SMC1A-205ENST00000469129 GDF11O95390 407 aa10.65□□□□□ -0.7
SMC1A-205ENST00000469129 TXLNAP40222 546 aa10.65□□□□□ -0.7
SMC1A-205ENST00000469129 SLC1A4P43007 532 aa10.65□□□□□ -0.7
SMC1A-205ENST00000469129 TRAF1Q13077 416 aa10.65□□□□□ -0.7
SMC1A-205ENST00000469129 SEPT2Q15019 361 aa10.65□□□□□ -0.7
SMC1A-205ENST00000469129 ANO6Q4KMQ2 910 aa10.65□□□□□ -0.7
SMC1A-205ENST00000469129 SLFN13Q68D06 897 aa10.65□□□□□ -0.7
SMC1A-205ENST00000469129 MCTP2Q6DN12 878 aa10.65□□□□□ -0.7
SMC1A-205ENST00000469129 RASGRP2Q7LDG7 609 aa10.65□□□□□ -0.7
SMC1A-205ENST00000469129 DPF2Q92785 391 aa10.65□□□□□ -0.7
SMC1A-205ENST00000469129 HOOK2Q96ED9 719 aa10.65□□□□□ -0.7
SMC1A-205ENST00000469129 PDLIM2Q96JY6 352 aa10.65□□□□□ -0.7
SMC1A-205ENST00000469129 GOPCQ9HD26 462 aa10.65□□□□□ -0.7
SMC1A-205ENST00000469129 GPCPD1Q9NPB8 672 aa10.65□□□□□ -0.7
SMC1A-205ENST00000469129 GINM1Q9NU53 330 aa10.65□□□□□ -0.7
SMC1A-205ENST00000469129 KCNH3Q9ULD8 1083 aa10.65□□□□□ -0.7
SMC1A-205ENST00000469129 PCDHA6Q9UN73 950 aa10.65□□□□□ -0.7
SMC1A-205ENST00000469129 PCDHA8Q9Y5H6 950 aa10.65□□□□□ -0.7
SMC1A-205ENST00000469129 LOXHD1Q8IVV2 1947 aa10.64□□□□□ -0.71
SMC1A-205ENST00000469129 FZD9O00144 591 aa10.64□□□□□ -0.71
SMC1A-205ENST00000469129 WNT10BO00744 389 aa10.64□□□□□ -0.71
SMC1A-205ENST00000469129 ZBTB5O15062 677 aa10.64□□□□□ -0.71
SMC1A-205ENST00000469129 GH2P01242 217 aa10.64□□□□□ -0.71
SMC1A-205ENST00000469129 LONP1P36776 959 aaKnown RBP10.64□□□□□ -0.71
SMC1A-205ENST00000469129 EARS2Q5JPH6 523 aaKnown RBP10.64□□□□□ -0.71
SMC1A-205ENST00000469129 TYW1BQ6NUM6 668 aa10.64□□□□□ -0.71
SMC1A-205ENST00000469129 KRBA2Q6ZNG9 492 aa10.64□□□□□ -0.71
SMC1A-205ENST00000469129 TEX2Q8IWB9 1127 aa10.64□□□□□ -0.71
SMC1A-205ENST00000469129 ADGRF4Q8IZF3 695 aa10.64□□□□□ -0.71
SMC1A-205ENST00000469129 CNNM3Q8NE01 707 aa10.64□□□□□ -0.71
SMC1A-205ENST00000469129 CUL5Q93034 780 aa10.64□□□□□ -0.71
SMC1A-205ENST00000469129 MTMR8Q96EF0 704 aa10.64□□□□□ -0.71
SMC1A-205ENST00000469129 CLIC6Q96NY7 704 aa10.64□□□□□ -0.71
SMC1A-205ENST00000469129 NAP1L4Q99733 375 aaKnown RBP10.64□□□□□ -0.71
SMC1A-205ENST00000469129 JMJD4Q9H9V9 463 aa10.64□□□□□ -0.71
SMC1A-205ENST00000469129 KIAA1468Q9P260 1216 aa10.64□□□□□ -0.71
SMC1A-205ENST00000469129 ZBTB21Q9ULJ3 1066 aa10.64□□□□□ -0.71
SMC1A-205ENST00000469129 PHIPQ8WWQ0 1821 aa10.63□□□□□ -0.71
SMC1A-205ENST00000469129 GOLGA6L19H0YKK7 550 aa10.63□□□□□ -0.71
SMC1A-205ENST00000469129 RAD21O60216 631 aa10.63□□□□□ -0.71
SMC1A-205ENST00000469129 BMP3P12645 472 aa10.63□□□□□ -0.71
SMC1A-205ENST00000469129 PRPHP41219 470 aa10.63□□□□□ -0.71
SMC1A-205ENST00000469129 ZNF165P49910 485 aa10.63□□□□□ -0.71
SMC1A-205ENST00000469129 RASSF7Q02833 373 aa10.63□□□□□ -0.71
SMC1A-205ENST00000469129 PTGDRQ13258 359 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms