RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 ABRAQ8N0Z2 381 aa15.31■□□□□ 0.04
CLRN1-204ENST00000468836 SHISA4Q96DD7 197 aa15.31■□□□□ 0.04
CLRN1-204ENST00000468836 CCDC136Q96JN2 1154 aa15.31■□□□□ 0.04
CLRN1-204ENST00000468836 IL17RBQ9NRM6 502 aa15.31■□□□□ 0.04
CLRN1-204ENST00000468836 ADAMTS5Q9UNA0 930 aa15.31■□□□□ 0.04
CLRN1-204ENST00000468836 GREB1LQ9C091 1923 aaPredicted RBP15.31■□□□□ 0.04
CLRN1-204ENST00000468836 HOXC6P09630 235 aa15.3■□□□□ 0.04
CLRN1-204ENST00000468836 CHMLP26374 656 aa15.3■□□□□ 0.04
CLRN1-204ENST00000468836 CNGA1P29973 690 aa15.3■□□□□ 0.04
CLRN1-204ENST00000468836 NEDD4P46934 1319 aa15.3■□□□□ 0.04
CLRN1-204ENST00000468836 CACNB2Q08289 660 aaPredicted RBP15.3■□□□□ 0.04
CLRN1-204ENST00000468836 TRDNQ13061 729 aa15.3■□□□□ 0.04
CLRN1-204ENST00000468836 KCTD1Q719H9 257 aa15.3■□□□□ 0.04
CLRN1-204ENST00000468836 RBBP6Q7Z6E9 1792 aaKnown RBP15.3■□□□□ 0.04
CLRN1-204ENST00000468836 DCAF4Q8WV16 495 aa15.3■□□□□ 0.04
CLRN1-204ENST00000468836 HTATIP2Q9BUP3 242 aa15.3■□□□□ 0.04
CLRN1-204ENST00000468836 KRT23Q9C075 422 aa15.3■□□□□ 0.04
CLRN1-204ENST00000468836 CNNM2Q9H8M5 875 aa15.3■□□□□ 0.04
CLRN1-204ENST00000468836 RAVER2Q9HCJ3 691 aaKnown RBP15.3■□□□□ 0.04
CLRN1-204ENST00000468836 TCP11L1Q9NUJ3 509 aa15.3■□□□□ 0.04
CLRN1-204ENST00000468836 ZNF214Q9UL59 606 aaPredicted RBP15.3■□□□□ 0.04
CLRN1-204ENST00000468836 TACC3Q9Y6A5 838 aa15.3■□□□□ 0.04
CLRN1-204ENST00000468836 A0A0G2JMZ2 1700 aa15.29■□□□□ 0.04
CLRN1-204ENST00000468836 KDM4AO75164 1064 aa15.29■□□□□ 0.04
CLRN1-204ENST00000468836 PRPF38BQ5VTL8 546 aaKnown RBP15.29■□□□□ 0.04
CLRN1-204ENST00000468836 RCSD1Q6JBY9 416 aa15.29■□□□□ 0.04
CLRN1-204ENST00000468836 KIAA1211Q6ZU35 1233 aa15.29■□□□□ 0.04
CLRN1-204ENST00000468836 NPLOC4Q8TAT6 608 aa15.29■□□□□ 0.04
CLRN1-204ENST00000468836 DDX11Q96FC9 970 aa15.29■□□□□ 0.04
CLRN1-204ENST00000468836 TTC14Q96N46 770 aa15.29■□□□□ 0.04
CLRN1-204ENST00000468836 TMEM47Q9BQJ4 181 aa15.29■□□□□ 0.04
CLRN1-204ENST00000468836 UBAC1Q9BSL1 405 aa15.29■□□□□ 0.04
CLRN1-204ENST00000468836 FBXO40Q9UH90 709 aa15.29■□□□□ 0.04
CLRN1-204ENST00000468836 B4E1Z4 1266 aa15.28■□□□□ 0.04
CLRN1-204ENST00000468836 CYP2C19P33261 490 aa15.28■□□□□ 0.04
CLRN1-204ENST00000468836 OAZ1P54368 228 aa15.28■□□□□ 0.04
CLRN1-204ENST00000468836 MAP3K21Q5TCX8 1036 aa15.28■□□□□ 0.04
CLRN1-204ENST00000468836 OLFML2BQ68BL8 750 aa15.28■□□□□ 0.04
CLRN1-204ENST00000468836 REPS2Q8NFH8 660 aa15.28■□□□□ 0.04
CLRN1-204ENST00000468836 DPF3Q92784 378 aa15.28■□□□□ 0.04
CLRN1-204ENST00000468836 ZKSCAN3Q9BRR0 538 aa15.28■□□□□ 0.04
CLRN1-204ENST00000468836 NBPF3Q9H094 633 aa15.28■□□□□ 0.04
CLRN1-204ENST00000468836 KAT14Q9H8E8 782 aa15.28■□□□□ 0.04
CLRN1-204ENST00000468836 SLC38A10Q9HBR0 1119 aa15.28■□□□□ 0.04
CLRN1-204ENST00000468836 U3KPZ7 1027 aaPredicted RBP15.28■□□□□ 0.04
CLRN1-204ENST00000468836 FRMPD2Q68DX3 1309 aaPredicted RBP15.27■□□□□ 0.04
CLRN1-204ENST00000468836 ATP2A1O14983 1001 aa15.27■□□□□ 0.04
CLRN1-204ENST00000468836 MSCO60682 206 aa15.27■□□□□ 0.04
CLRN1-204ENST00000468836 CCND3P30281 292 aaPredicted RBP15.27■□□□□ 0.04
CLRN1-204ENST00000468836 CCDC174Q6PII3 467 aa15.27■□□□□ 0.04
CLRN1-204ENST00000468836 CASC1Q6TDU7 716 aa15.27■□□□□ 0.04
CLRN1-204ENST00000468836 RALYLQ86SE5 291 aaKnown RBP15.27■□□□□ 0.04
CLRN1-204ENST00000468836 ANKRD35Q8N283 1001 aa15.27■□□□□ 0.04
CLRN1-204ENST00000468836 ANKLE1Q8NAG6 615 aa15.27■□□□□ 0.04
CLRN1-204ENST00000468836 HOMER2Q9NSB8 354 aa15.27■□□□□ 0.04
CLRN1-204ENST00000468836 FLRT1Q9NZU1 646 aa15.27■□□□□ 0.04
CLRN1-204ENST00000468836 SGSM2O43147 1006 aa15.26■□□□□ 0.03
CLRN1-204ENST00000468836 PLA2G6O60733 806 aa15.26■□□□□ 0.03
CLRN1-204ENST00000468836 COBLO75128 1261 aa15.26■□□□□ 0.03
CLRN1-204ENST00000468836 PGK2P07205 417 aa15.26■□□□□ 0.03
CLRN1-204ENST00000468836 NECAB2Q7Z6G3 386 aa15.26■□□□□ 0.03
CLRN1-204ENST00000468836 DGKHQ86XP1 1220 aa15.26■□□□□ 0.03
CLRN1-204ENST00000468836 CHST13Q8NET6 341 aa15.26■□□□□ 0.03
CLRN1-204ENST00000468836 MAML3Q96JK9 1138 aa15.26■□□□□ 0.03
CLRN1-204ENST00000468836 ZSCAN10Q96SZ4 725 aaPredicted RBP15.26■□□□□ 0.03
CLRN1-204ENST00000468836 CRISPLD2Q9H0B8 497 aa15.26■□□□□ 0.03
CLRN1-204ENST00000468836 IL25Q9H293 177 aa15.26■□□□□ 0.03
CLRN1-204ENST00000468836 GPCPD1Q9NPB8 672 aa15.26■□□□□ 0.03
CLRN1-204ENST00000468836 TNKSO95271 1327 aa15.25■□□□□ 0.03
CLRN1-204ENST00000468836 ERICH2A1L162 156 aa15.25■□□□□ 0.03
CLRN1-204ENST00000468836 CENPBP07199 599 aaPredicted RBP15.25■□□□□ 0.03
CLRN1-204ENST00000468836 NOVP48745 357 aa15.25■□□□□ 0.03
CLRN1-204ENST00000468836 SYDE2Q5VT97 1194 aa15.25■□□□□ 0.03
CLRN1-204ENST00000468836 RASGRP2Q7LDG7 609 aa15.25■□□□□ 0.03
CLRN1-204ENST00000468836 ACAD9Q9H845 621 aa15.25■□□□□ 0.03
CLRN1-204ENST00000468836 DDX20Q9UHI6 824 aaKnown RBP15.25■□□□□ 0.03
CLRN1-204ENST00000468836 PRR12Q9ULL5 1215 aa15.25■□□□□ 0.03
CLRN1-204ENST00000468836 ZNF236Q9UL36 1845 aa15.24■□□□□ 0.03
CLRN1-204ENST00000468836 MYH4Q9Y623 1939 aa15.24■□□□□ 0.03
CLRN1-204ENST00000468836 PDHBP11177 359 aa15.24■□□□□ 0.03
CLRN1-204ENST00000468836 ALAS1P13196 640 aa15.24■□□□□ 0.03
CLRN1-204ENST00000468836 SLC16A2P36021 539 aa15.24■□□□□ 0.03
CLRN1-204ENST00000468836 SART3Q15020 963 aaKnown RBP15.24■□□□□ 0.03
CLRN1-204ENST00000468836 TKFCQ3LXA3 575 aa15.24■□□□□ 0.03
CLRN1-204ENST00000468836 GPATCH4Q5T3I0 446 aaKnown RBP15.24■□□□□ 0.03
CLRN1-204ENST00000468836 IFIT1BQ5T764 474 aaKnown RBP15.24■□□□□ 0.03
CLRN1-204ENST00000468836 PNMA1Q8ND90 353 aa15.24■□□□□ 0.03
CLRN1-204ENST00000468836 PAWRQ96IZ0 340 aaKnown RBP15.24■□□□□ 0.03
CLRN1-204ENST00000468836 RNF146Q9NTX7 359 aa15.24■□□□□ 0.03
CLRN1-204ENST00000468836 OGDHLQ9ULD0 1010 aa15.24■□□□□ 0.03
CLRN1-204ENST00000468836 CCPG1Q9ULG6 757 aa15.24■□□□□ 0.03
CLRN1-204ENST00000468836 CNPY2Q9Y2B0 182 aa15.24■□□□□ 0.03
CLRN1-204ENST00000468836 DIS3Q9Y2L1 958 aaKnown RBP15.24■□□□□ 0.03
CLRN1-204ENST00000468836 RIPK3Q9Y572 518 aa15.24■□□□□ 0.03
CLRN1-204ENST00000468836 PLXNB2O15031 1838 aa15.24■□□□□ 0.03
CLRN1-204ENST00000468836 CENPFP49454 3210 aa15.23■□□□□ 0.03
CLRN1-204ENST00000468836 MYCNP04198 464 aaPredicted RBP15.23■□□□□ 0.03
CLRN1-204ENST00000468836 CYBAP13498 195 aa15.23■□□□□ 0.03
CLRN1-204ENST00000468836 SNAP25P60880 206 aa15.23■□□□□ 0.03
CLRN1-204ENST00000468836 PTH1RQ03431 593 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms