RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 TCF12Q99081 682 aa4.52□□□□□ -1.69
CDHR3-206ENST00000468477 ASPSCR1Q9BZE9 553 aa4.52□□□□□ -1.69
CDHR3-206ENST00000468477 OSBPL7Q9BZF2 842 aa4.52□□□□□ -1.69
CDHR3-206ENST00000468477 C9orf78Q9NZ63 289 aaPredicted RBP4.52□□□□□ -1.69
CDHR3-206ENST00000468477 PFDN2Q9UHV9 154 aa4.52□□□□□ -1.69
CDHR3-206ENST00000468477 ISY1Q9ULR0 285 aaKnown RBP4.52□□□□□ -1.69
CDHR3-206ENST00000468477 AP4E1Q9UPM8 1137 aa4.52□□□□□ -1.69
CDHR3-206ENST00000468477 PTCH2Q9Y6C5 1203 aa4.52□□□□□ -1.69
CDHR3-206ENST00000468477 RASSF10A6NK89 507 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 IRS4O14654 1257 aaPredicted RBP4.51□□□□□ -1.69
CDHR3-206ENST00000468477 PRPF3O43395 683 aaKnown RBP4.51□□□□□ -1.69
CDHR3-206ENST00000468477 FIBPO43427 364 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 ADH5P11766 374 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 DRD2P14416 443 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 RAB6AP20340 208 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 SCP2P22307 547 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 ITPKAP23677 461 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 SARSP49591 514 aaKnown RBP4.51□□□□□ -1.69
CDHR3-206ENST00000468477 PURAQ00577 322 aaKnown RBP4.51□□□□□ -1.69
CDHR3-206ENST00000468477 DDR2Q16832 855 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 ZNF423Q2M1K9 1284 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 SPRED3Q2MJR0 410 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 MTERF2Q49AM1 385 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 TNNI3KQ59H18 835 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 FAM102BQ5T8I3 360 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 USPL1Q5W0Q7 1092 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 MMS22LQ6ZRQ5 1243 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 NIM1KQ8IY84 436 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 TCEAL8Q8IYN2 117 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 CLASRPQ8N2M8 674 aaKnown RBP4.51□□□□□ -1.69
CDHR3-206ENST00000468477 SNRNP27Q8WVK2 155 aaKnown RBP4.51□□□□□ -1.69
CDHR3-206ENST00000468477 CCDC74AQ96AQ1 378 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 SKA1Q96BD8 255 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 HOOK2Q96ED9 719 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 MPP4Q96JB8 637 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 HERPUD2Q9BSE4 406 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 CDH19Q9H159 772 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 ALDH8A1Q9H2A2 487 aaPredicted RBP4.51□□□□□ -1.69
CDHR3-206ENST00000468477 ZNF576Q9H609 170 aa4.51□□□□□ -1.69
CDHR3-206ENST00000468477 DIS3Q9Y2L1 958 aaKnown RBP4.51□□□□□ -1.69
CDHR3-206ENST00000468477 A0A087X0B3 334 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 PRR19A6NJB7 356 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 F6X3S4 739 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 GIPC1O14908 333 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 CLGNO14967 610 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 CYP26A1O43174 497 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 CBFA2T2O43439 604 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 PIP5K1CO60331 668 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 DIAPH1O60610 1272 aaKnown RBP4.5□□□□□ -1.69
CDHR3-206ENST00000468477 PDE8AO60658 829 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 HSP90AB1P08238 724 aaKnown RBP4.5□□□□□ -1.69
CDHR3-206ENST00000468477 USP17L7P0C7H9 530 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 FAM200BP0CF97 657 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 TRIM27P14373 513 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 ASPAP45381 313 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 HTR3AP46098 478 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 ITKQ08881 620 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 PIN1Q13526 163 aaPredicted RBP4.5□□□□□ -1.69
CDHR3-206ENST00000468477 SEPT6Q14141 434 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 PUM3Q15397 648 aaKnown RBP4.5□□□□□ -1.69
CDHR3-206ENST00000468477 CCDC92Q53HC0 331 aaPredicted RBP4.5□□□□□ -1.69
CDHR3-206ENST00000468477 HYIQ5T013 277 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 LCE3BQ5TA77 95 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 NXNQ6DKJ4 435 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 PRPF40BQ6NWY9 871 aaKnown RBP4.5□□□□□ -1.69
CDHR3-206ENST00000468477 PI16Q6UXB8 463 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 DDX46Q7L014 1031 aaKnown RBP4.5□□□□□ -1.69
CDHR3-206ENST00000468477 DTX1Q86Y01 620 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 RELL1Q8IUW5 271 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 PASD1Q8IV76 773 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 STK11IPQ8N1F8 1099 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 MSL3Q8N5Y2 521 aaKnown RBP4.5□□□□□ -1.69
CDHR3-206ENST00000468477 MAGEB6Q8N7X4 407 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 C2CD4AQ8NCU7 369 aaPredicted RBP4.5□□□□□ -1.69
CDHR3-206ENST00000468477 RSPH1Q8WYR4 309 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 NINJ1Q92982 152 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 RTFDC1Q9BY42 306 aaPredicted RBP4.5□□□□□ -1.69
CDHR3-206ENST00000468477 PIDD1Q9HB75 910 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 CWC25Q9NXE8 425 aaPredicted RBP4.5□□□□□ -1.69
CDHR3-206ENST00000468477 GPN3Q9UHW5 284 aaPredicted RBP4.5□□□□□ -1.69
CDHR3-206ENST00000468477 ZNF180Q9UJW8 692 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 MAPK8IP1Q9UQF2 711 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 SLC45A1Q9Y2W3 748 aa4.5□□□□□ -1.69
CDHR3-206ENST00000468477 SYNGAP1Q96PV0 1343 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 E2F8A0AVK6 867 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 VSTM5A8MXK1 200 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 NBNO60934 754 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 RAPGEF3O95398 923 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 FOSL1P15407 271 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 SERPINB3P29508 390 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 GBP2P32456 591 aaPredicted RBP4.49□□□□□ -1.69
CDHR3-206ENST00000468477 EIF4A3P38919 411 aaKnown RBP4.49□□□□□ -1.69
CDHR3-206ENST00000468477 TXKP42681 527 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 GPSM2P81274 684 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 BIRC3Q13489 604 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 COL9A2Q14055 689 aaPredicted RBP4.49□□□□□ -1.69
CDHR3-206ENST00000468477 CDC37Q16543 378 aaPredicted RBP4.49□□□□□ -1.69
CDHR3-206ENST00000468477 CYP27C1Q4G0S4 372 aa4.49□□□□□ -1.69
CDHR3-206ENST00000468477 TBC1D10BQ4KMP7 808 aaPredicted RBP4.49□□□□□ -1.69
CDHR3-206ENST00000468477 ARMC3Q5W041 872 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms