RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 SLC5A4Q9NY91 659 aa20.23■□□□□ 0.83
SSBP1-207ENST00000468267 STX8Q9UNK0 236 aa20.23■□□□□ 0.83
SSBP1-207ENST00000468267 ZBED4O75132 1171 aa20.22■□□□□ 0.83
SSBP1-207ENST00000468267 PCP11498 1178 aaKnown RBP20.22■□□□□ 0.83
SSBP1-207ENST00000468267 GSPT1P15170 499 aaKnown RBP20.22■□□□□ 0.83
SSBP1-207ENST00000468267 RRP12Q5JTH9 1297 aaKnown RBP20.22■□□□□ 0.83
SSBP1-207ENST00000468267 AKNAD1Q5T1N1 836 aa20.22■□□□□ 0.83
SSBP1-207ENST00000468267 OLFML2BQ68BL8 750 aa20.22■□□□□ 0.83
SSBP1-207ENST00000468267 KIFC2Q96AC6 838 aa20.22■□□□□ 0.83
SSBP1-207ENST00000468267 HTATIP2Q9BUP3 242 aa20.22■□□□□ 0.83
SSBP1-207ENST00000468267 OGDHLQ9ULD0 1010 aa20.22■□□□□ 0.83
SSBP1-207ENST00000468267 ATP2A1O14983 1001 aa20.21■□□□□ 0.83
SSBP1-207ENST00000468267 CYP2C19P33261 490 aa20.21■□□□□ 0.83
SSBP1-207ENST00000468267 LHX8Q68G74 356 aa20.21■□□□□ 0.83
SSBP1-207ENST00000468267 MFSD6Q6ZSS7 791 aa20.21■□□□□ 0.83
SSBP1-207ENST00000468267 STAG1Q8WVM7 1258 aa20.21■□□□□ 0.83
SSBP1-207ENST00000468267 PAWRQ96IZ0 340 aaKnown RBP20.21■□□□□ 0.83
SSBP1-207ENST00000468267 MMP19Q99542 508 aa20.21■□□□□ 0.83
SSBP1-207ENST00000468267 TEX13BQ9BXU2 312 aa20.21■□□□□ 0.83
SSBP1-207ENST00000468267 SLC38A10Q9HBR0 1119 aa20.21■□□□□ 0.83
SSBP1-207ENST00000468267 TCP11L1Q9NUJ3 509 aa20.21■□□□□ 0.83
SSBP1-207ENST00000468267 PLXNA1Q9UIW2 1896 aa20.21■□□□□ 0.83
SSBP1-207ENST00000468267 TMEM232C9JQI7 657 aa20.2■□□□□ 0.82
SSBP1-207ENST00000468267 MCCP23508 829 aa20.2■□□□□ 0.82
SSBP1-207ENST00000468267 MNX1P50219 401 aaPredicted RBP20.2■□□□□ 0.82
SSBP1-207ENST00000468267 SNRNP48Q6IEG0 339 aaKnown RBP20.2■□□□□ 0.82
SSBP1-207ENST00000468267 NECAB2Q7Z6G3 386 aa20.2■□□□□ 0.82
SSBP1-207ENST00000468267 TBC1D10CQ8IV04 446 aa20.2■□□□□ 0.82
SSBP1-207ENST00000468267 CHURC1Q8WUH1 139 aa20.2■□□□□ 0.82
SSBP1-207ENST00000468267 DPF3Q92784 378 aa20.2■□□□□ 0.82
SSBP1-207ENST00000468267 CTDP1Q9Y5B0 961 aaPredicted RBP20.2■□□□□ 0.82
SSBP1-207ENST00000468267 LAMA4Q16363 1823 aa20.2■□□□□ 0.82
SSBP1-207ENST00000468267 RANBP2P49792 3224 aaKnown RBP20.19■□□□□ 0.82
SSBP1-207ENST00000468267 ZNF213O14771 459 aa20.19■□□□□ 0.82
SSBP1-207ENST00000468267 PLA2G6O60733 806 aa20.19■□□□□ 0.82
SSBP1-207ENST00000468267 FDX1P10109 184 aa20.19■□□□□ 0.82
SSBP1-207ENST00000468267 SLC1A4P43007 532 aa20.19■□□□□ 0.82
SSBP1-207ENST00000468267 STAT2P52630 851 aa20.19■□□□□ 0.82
SSBP1-207ENST00000468267 KCTD2Q14681 263 aa20.19■□□□□ 0.82
SSBP1-207ENST00000468267 RCSD1Q6JBY9 416 aa20.19■□□□□ 0.82
SSBP1-207ENST00000468267 DIS3LQ8TF46 1054 aaKnown RBP20.19■□□□□ 0.82
SSBP1-207ENST00000468267 DSCC1Q9BVC3 393 aa20.19■□□□□ 0.82
SSBP1-207ENST00000468267 RNF41Q9H4P4 317 aaPredicted RBP20.19■□□□□ 0.82
SSBP1-207ENST00000468267 RIPK3Q9Y572 518 aa20.19■□□□□ 0.82
SSBP1-207ENST00000468267 SMCHD1A6NHR9 2005 aa20.19■□□□□ 0.82
SSBP1-207ENST00000468267 OAZ1P54368 228 aa20.18■□□□□ 0.82
SSBP1-207ENST00000468267 FAM160B2Q86V87 743 aa20.18■□□□□ 0.82
SSBP1-207ENST00000468267 CPXCR1Q8N123 301 aa20.18■□□□□ 0.82
SSBP1-207ENST00000468267 TRPV1Q8NER1 839 aa20.18■□□□□ 0.82
SSBP1-207ENST00000468267 CHMP4CQ96CF2 233 aa20.18■□□□□ 0.82
SSBP1-207ENST00000468267 MAML3Q96JK9 1138 aa20.18■□□□□ 0.82
SSBP1-207ENST00000468267 RAVER2Q9HCJ3 691 aaKnown RBP20.18■□□□□ 0.82
SSBP1-207ENST00000468267 ISY1Q9ULR0 285 aaKnown RBP20.18■□□□□ 0.82
SSBP1-207ENST00000468267 FRMPD3Q5JV73 1810 aa20.18■□□□□ 0.82
SSBP1-207ENST00000468267 H0YGN5 161 aa20.17■□□□□ 0.82
SSBP1-207ENST00000468267 PGK2P07205 417 aa20.17■□□□□ 0.82
SSBP1-207ENST00000468267 TOP1P11387 765 aaKnown RBP20.17■□□□□ 0.82
SSBP1-207ENST00000468267 CYBAP13498 195 aa20.17■□□□□ 0.82
SSBP1-207ENST00000468267 ZNF792Q3KQV3 632 aa20.17■□□□□ 0.82
SSBP1-207ENST00000468267 KCTD1Q719H9 257 aa20.17■□□□□ 0.82
SSBP1-207ENST00000468267 TMEM47Q9BQJ4 181 aa20.17■□□□□ 0.82
SSBP1-207ENST00000468267 IL25Q9H293 177 aa20.17■□□□□ 0.82
SSBP1-207ENST00000468267 DIS3Q9Y2L1 958 aaKnown RBP20.17■□□□□ 0.82
SSBP1-207ENST00000468267 ALPK3Q96L96 1907 aa20.17■□□□□ 0.82
SSBP1-207ENST00000468267 CNGA1P29973 690 aa20.16■□□□□ 0.82
SSBP1-207ENST00000468267 IKQ13123 557 aaPredicted RBP20.16■□□□□ 0.82
SSBP1-207ENST00000468267 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.16■□□□□ 0.82
SSBP1-207ENST00000468267 DCAF4Q8WV16 495 aa20.16■□□□□ 0.82
SSBP1-207ENST00000468267 TTC14Q96N46 770 aa20.16■□□□□ 0.82
SSBP1-207ENST00000468267 DDX20Q9UHI6 824 aaKnown RBP20.16■□□□□ 0.82
SSBP1-207ENST00000468267 CTNNA3Q9UI47 895 aa20.16■□□□□ 0.82
SSBP1-207ENST00000468267 MSCO60682 206 aa20.15■□□□□ 0.82
SSBP1-207ENST00000468267 CHMLP26374 656 aa20.15■□□□□ 0.82
SSBP1-207ENST00000468267 SLC4A3P48751 1232 aa20.15■□□□□ 0.82
SSBP1-207ENST00000468267 NT5C2P49902 561 aa20.15■□□□□ 0.82
SSBP1-207ENST00000468267 RASGRP2Q7LDG7 609 aa20.15■□□□□ 0.82
SSBP1-207ENST00000468267 ESR2Q92731 530 aa20.15■□□□□ 0.82
SSBP1-207ENST00000468267 MTMR7Q9Y216 660 aa20.15■□□□□ 0.82
SSBP1-207ENST00000468267 NEDD4P46934 1319 aa20.15■□□□□ 0.82
SSBP1-207ENST00000468267 TRIOBPQ9H2D6 2365 aa20.14■□□□□ 0.82
SSBP1-207ENST00000468267 RAD50Q92878 1312 aa20.14■□□□□ 0.81
SSBP1-207ENST00000468267 IMMTQ16891 758 aaKnown RBP20.14■□□□□ 0.81
SSBP1-207ENST00000468267 PRAMEF19Q5SWL8 479 aa20.14■□□□□ 0.81
SSBP1-207ENST00000468267 CHST13Q8NET6 341 aa20.14■□□□□ 0.81
SSBP1-207ENST00000468267 RUFY2Q8WXA3 655 aa20.14■□□□□ 0.81
SSBP1-207ENST00000468267 TINF2Q9BSI4 451 aa20.14■□□□□ 0.81
SSBP1-207ENST00000468267 C11orf49Q9H6J7 331 aa20.14■□□□□ 0.81
SSBP1-207ENST00000468267 FBXO40Q9UH90 709 aa20.14■□□□□ 0.81
SSBP1-207ENST00000468267 NR2E3Q9Y5X4 410 aa20.14■□□□□ 0.81
SSBP1-207ENST00000468267 ZNF536O15090 1300 aa20.13■□□□□ 0.81
SSBP1-207ENST00000468267 DNAJC25-GNG10A0A024R161 153 aa20.13■□□□□ 0.81
SSBP1-207ENST00000468267 CCDC96Q2M329 555 aa20.13■□□□□ 0.81
SSBP1-207ENST00000468267 DDX11Q96FC9 970 aa20.13■□□□□ 0.81
SSBP1-207ENST00000468267 NRBP1Q9UHY1 535 aa20.13■□□□□ 0.81
SSBP1-207ENST00000468267 PRR12Q9ULL5 1215 aa20.13■□□□□ 0.81
SSBP1-207ENST00000468267 SEPT4O43236 478 aa20.12■□□□□ 0.81
SSBP1-207ENST00000468267 EVI5O60447 810 aa20.12■□□□□ 0.81
SSBP1-207ENST00000468267 COL6A1P12109 1028 aa20.12■□□□□ 0.81
SSBP1-207ENST00000468267 BTNL9Q6UXG8 535 aa20.12■□□□□ 0.81
SSBP1-207ENST00000468267 AGBL1Q96MI9 1066 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms