RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 OXER1Q8TDS5 423 aa11.63□□□□□ -0.55
MSH5-213ENST00000468136 BPIFA3Q9BQP9 254 aa11.63□□□□□ -0.55
MSH5-213ENST00000468136 DNAJC18Q9H819 358 aa11.63□□□□□ -0.55
MSH5-213ENST00000468136 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.63□□□□□ -0.55
MSH5-213ENST00000468136 FER1L6Q2WGJ9 1857 aa11.63□□□□□ -0.55
MSH5-213ENST00000468136 BRCA1P38398 1863 aaKnown RBP11.62□□□□□ -0.55
MSH5-213ENST00000468136 UBE2Q2LH0YL09 131 aa11.62□□□□□ -0.55
MSH5-213ENST00000468136 FZD9O00144 591 aa11.62□□□□□ -0.55
MSH5-213ENST00000468136 PLA2G6O60733 806 aa11.62□□□□□ -0.55
MSH5-213ENST00000468136 TPM3P06753 285 aa11.62□□□□□ -0.55
MSH5-213ENST00000468136 SLC1A4P43007 532 aa11.62□□□□□ -0.55
MSH5-213ENST00000468136 R3HDM1Q15032 1099 aaKnown RBP11.62□□□□□ -0.55
MSH5-213ENST00000468136 NONOQ15233 471 aaKnown RBP eCLIP11.62□□□□□ -0.55
MSH5-213ENST00000468136 CAMK4Q16566 473 aa11.62□□□□□ -0.55
MSH5-213ENST00000468136 SLFN13Q68D06 897 aa11.62□□□□□ -0.55
MSH5-213ENST00000468136 SHC4Q6S5L8 630 aa11.62□□□□□ -0.55
MSH5-213ENST00000468136 TRIML1Q8N9V2 468 aa11.62□□□□□ -0.55
MSH5-213ENST00000468136 UPF1Q92900 1129 aaKnown RBP eCLIP11.62□□□□□ -0.55
MSH5-213ENST00000468136 AK8Q96MA6 479 aa11.62□□□□□ -0.55
MSH5-213ENST00000468136 MYOZ2Q9NPC6 264 aa11.62□□□□□ -0.55
MSH5-213ENST00000468136 PNMA2Q9UL42 364 aa11.62□□□□□ -0.55
MSH5-213ENST00000468136 PCDHB6Q9Y5E3 794 aa11.62□□□□□ -0.55
MSH5-213ENST00000468136 MRVI1Q9Y6F6 885 aa11.62□□□□□ -0.55
MSH5-213ENST00000468136 SMCO2A6NFE2 343 aa11.61□□□□□ -0.55
MSH5-213ENST00000468136 SMTNL1A8MU46 457 aa11.61□□□□□ -0.55
MSH5-213ENST00000468136 GOLGA6L19H0YKK7 550 aa11.61□□□□□ -0.55
MSH5-213ENST00000468136 NFKBIEO00221 500 aa11.61□□□□□ -0.55
MSH5-213ENST00000468136 ZBTB5O15062 677 aa11.61□□□□□ -0.55
MSH5-213ENST00000468136 EEF2P13639 858 aaKnown RBP11.61□□□□□ -0.55
MSH5-213ENST00000468136 ZNF165P49910 485 aa11.61□□□□□ -0.55
MSH5-213ENST00000468136 ADCY7P51828 1080 aa11.61□□□□□ -0.55
MSH5-213ENST00000468136 TPM4P67936 248 aa11.61□□□□□ -0.55
MSH5-213ENST00000468136 CCDC96Q2M329 555 aa11.61□□□□□ -0.55
MSH5-213ENST00000468136 BTNL9Q6UXG8 535 aa11.61□□□□□ -0.55
MSH5-213ENST00000468136 KRBA2Q6ZNG9 492 aa11.61□□□□□ -0.55
MSH5-213ENST00000468136 PIK3AP1Q6ZUJ8 805 aa11.61□□□□□ -0.55
MSH5-213ENST00000468136 ZFPM1Q8IX07 1006 aa11.61□□□□□ -0.55
MSH5-213ENST00000468136 CKAP2LQ8IYA6 745 aa11.61□□□□□ -0.55
MSH5-213ENST00000468136 REXO1Q8N1G1 1221 aaKnown RBP11.61□□□□□ -0.55
MSH5-213ENST00000468136 LRRC47Q8N1G4 583 aaKnown RBP11.61□□□□□ -0.55
MSH5-213ENST00000468136 CNNM3Q8NE01 707 aa11.61□□□□□ -0.55
MSH5-213ENST00000468136 GTPBP4Q9BZE4 634 aaKnown RBP11.61□□□□□ -0.55
MSH5-213ENST00000468136 GOPCQ9HD26 462 aa11.61□□□□□ -0.55
MSH5-213ENST00000468136 DACH1Q9UI36 760 aa11.61□□□□□ -0.55
MSH5-213ENST00000468136 PCDHA6Q9UN73 950 aa11.61□□□□□ -0.55
MSH5-213ENST00000468136 BCS1LQ9Y276 419 aa11.61□□□□□ -0.55
MSH5-213ENST00000468136 PCDHA8Q9Y5H6 950 aa11.61□□□□□ -0.55
MSH5-213ENST00000468136 hCG_1642624A0A1W2PR95 340 aa11.6□□□□□ -0.55
MSH5-213ENST00000468136 SLC26A4O43511 780 aa11.6□□□□□ -0.55
MSH5-213ENST00000468136 SMC2O95347 1197 aa11.6□□□□□ -0.55
MSH5-213ENST00000468136 MYL1P05976 194 aa11.6□□□□□ -0.55
MSH5-213ENST00000468136 ASNSP08243 561 aa11.6□□□□□ -0.55
MSH5-213ENST00000468136 GCFC2P16383 781 aaKnown RBP11.6□□□□□ -0.55
MSH5-213ENST00000468136 HOXA7P31268 230 aaPredicted RBP11.6□□□□□ -0.55
MSH5-213ENST00000468136 PTGER2P43116 358 aa11.6□□□□□ -0.55
MSH5-213ENST00000468136 CACNB3P54284 484 aa11.6□□□□□ -0.55
MSH5-213ENST00000468136 PTGDRQ13258 359 aa11.6□□□□□ -0.55
MSH5-213ENST00000468136 DHX8Q14562 1220 aaKnown RBP11.6□□□□□ -0.55
MSH5-213ENST00000468136 TPRNQ4KMQ1 711 aa11.6□□□□□ -0.55
MSH5-213ENST00000468136 NEK8Q86SG6 692 aa11.6□□□□□ -0.55
MSH5-213ENST00000468136 RNF214Q8ND24 703 aa11.6□□□□□ -0.55
MSH5-213ENST00000468136 CUL5Q93034 780 aa11.6□□□□□ -0.55
MSH5-213ENST00000468136 SHISA4Q96DD7 197 aa11.6□□□□□ -0.55
MSH5-213ENST00000468136 PIGSQ96S52 555 aa11.6□□□□□ -0.55
MSH5-213ENST00000468136 PANK2Q9BZ23 570 aa11.6□□□□□ -0.55
MSH5-213ENST00000468136 MAGEF1Q9HAY2 307 aa11.6□□□□□ -0.55
MSH5-213ENST00000468136 SPON1Q9HCB6 807 aa11.6□□□□□ -0.55
MSH5-213ENST00000468136 RIC8AQ9NPQ8 531 aa11.6□□□□□ -0.55
MSH5-213ENST00000468136 TUBE1Q9UJT0 475 aa11.6□□□□□ -0.55
MSH5-213ENST00000468136 TMX2Q9Y320 296 aa11.6□□□□□ -0.55
MSH5-213ENST00000468136 BECN2A8MW95 431 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 GOLGA6L6A8MZA4 724 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 TCP10L2B9ZVM9 353 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 F5H6K3 240 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 WNT10BO00744 389 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 GOLGA8HP0CJ92 632 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 BMP3P12645 472 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 NLRP12P59046 1061 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 ATP2B2Q01814 1243 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 KLRC3Q07444 240 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 AP3B2Q13367 1082 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 SEPT2Q15019 361 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 SLC35G1Q2M3R5 365 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 ANO6Q4KMQ2 910 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 NT5DC1Q5TFE4 455 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 DCAF15Q66K64 600 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 DTHD1Q6ZMT9 781 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.59□□□□□ -0.55
MSH5-213ENST00000468136 FAM160B2Q86V87 743 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 HOMER1Q86YM7 354 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 ADGRF4Q8IZF3 695 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 IQUBQ8NA54 791 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 CHURC1Q8WUH1 139 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 GPKOWQ92917 476 aaPredicted RBP eCLIP11.59□□□□□ -0.55
MSH5-213ENST00000468136 RAB34Q9BZG1 259 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 CUEDC2Q9H467 287 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 JMJD4Q9H9V9 463 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 VEZTQ9HBM0 779 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 CCDC39Q9UFE4 941 aa11.59□□□□□ -0.55
MSH5-213ENST00000468136 PPP2R3BQ9Y5P8 575 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms