RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 SPICE1Q8N0Z3 855 aa23.64■■□□□ 1.37
TMEM53-207ENST00000468117 GMCL1Q96IK5 515 aa23.64■■□□□ 1.37
TMEM53-207ENST00000468117 PCDHA4Q9UN74 947 aa23.64■■□□□ 1.37
TMEM53-207ENST00000468117 USP17L10C9JJH3 530 aa23.63■■□□□ 1.37
TMEM53-207ENST00000468117 ATP2B1P20020 1258 aa23.63■■□□□ 1.37
TMEM53-207ENST00000468117 PTPAQ15257 358 aa23.63■■□□□ 1.37
TMEM53-207ENST00000468117 TMX2Q9Y320 296 aa23.63■■□□□ 1.37
TMEM53-207ENST00000468117 ADARB2Q9NS39 739 aaKnown RBP23.62■■□□□ 1.37
TMEM53-207ENST00000468117 SYNPO2Q9UMS6 1093 aa23.62■■□□□ 1.37
TMEM53-207ENST00000468117 PCDHB6Q9Y5E3 794 aa23.62■■□□□ 1.37
TMEM53-207ENST00000468117 MARCKSP29966 332 aaPredicted RBP23.62■■□□□ 1.37
TMEM53-207ENST00000468117 GLIS2Q9BZE0 524 aaPredicted RBP23.62■■□□□ 1.37
TMEM53-207ENST00000468117 SYCE3A1L190 88 aa23.61■■□□□ 1.37
TMEM53-207ENST00000468117 KIAA1755Q5JYT7 1200 aa23.61■■□□□ 1.37
TMEM53-207ENST00000468117 PIK3AP1Q6ZUJ8 805 aa23.61■■□□□ 1.37
TMEM53-207ENST00000468117 RASGRP4Q8TDF6 673 aa23.61■■□□□ 1.37
TMEM53-207ENST00000468117 CCDC12Q8WUD4 166 aaPredicted RBP23.61■■□□□ 1.37
TMEM53-207ENST00000468117 COA7Q96BR5 231 aa23.61■■□□□ 1.37
TMEM53-207ENST00000468117 ZMYND12Q9H0C1 365 aa23.61■■□□□ 1.37
TMEM53-207ENST00000468117 PNMA6FA0A0J9YX94 578 aa23.6■■□□□ 1.37
TMEM53-207ENST00000468117 BMP3P12645 472 aa23.6■■□□□ 1.37
TMEM53-207ENST00000468117 CCDC183Q5T5S1 534 aa23.6■■□□□ 1.37
TMEM53-207ENST00000468117 ADALQ6DHV7 355 aa23.6■■□□□ 1.37
TMEM53-207ENST00000468117 CCAR1Q8IX12 1150 aaKnown RBP23.6■■□□□ 1.37
TMEM53-207ENST00000468117 DOCK1Q14185 1865 aa23.6■■□□□ 1.37
TMEM53-207ENST00000468117 M0R2N6 131 aa23.6■■□□□ 1.37
TMEM53-207ENST00000468117 PPP1R11O60927 126 aaPredicted RBP23.6■■□□□ 1.37
TMEM53-207ENST00000468117 ZYXQ15942 572 aaKnown RBP23.6■■□□□ 1.37
TMEM53-207ENST00000468117 GALNT17Q6IS24 598 aa23.6■■□□□ 1.37
TMEM53-207ENST00000468117 FAM177A1Q8N128 213 aaPredicted RBP23.6■■□□□ 1.37
TMEM53-207ENST00000468117 MTMR8Q96EF0 704 aa23.6■■□□□ 1.37
TMEM53-207ENST00000468117 GOPCQ9HD26 462 aa23.6■■□□□ 1.37
TMEM53-207ENST00000468117 DACT1Q9NYF0 836 aa23.6■■□□□ 1.37
TMEM53-207ENST00000468117 FZD1Q9UP38 647 aa23.6■■□□□ 1.37
TMEM53-207ENST00000468117 SMCO2A6NFE2 343 aa23.59■■□□□ 1.37
TMEM53-207ENST00000468117 TMEM232C9JQI7 657 aa23.59■■□□□ 1.37
TMEM53-207ENST00000468117 ZBTB5O15062 677 aa23.59■■□□□ 1.37
TMEM53-207ENST00000468117 NR1I2O75469 434 aa23.59■■□□□ 1.37
TMEM53-207ENST00000468117 DCAF15Q66K64 600 aa23.59■■□□□ 1.37
TMEM53-207ENST00000468117 DPY19L2Q6NUT2 758 aa23.59■■□□□ 1.37
TMEM53-207ENST00000468117 DAGLBQ8NCG7 672 aa23.59■■□□□ 1.37
TMEM53-207ENST00000468117 hCG_1984214I3L0E3 225 aa23.59■■□□□ 1.37
TMEM53-207ENST00000468117 WNT7AO00755 349 aa23.59■■□□□ 1.37
TMEM53-207ENST00000468117 CTNND1O60716 968 aaKnown RBP23.59■■□□□ 1.37
TMEM53-207ENST00000468117 INPP5BP32019 993 aa23.59■■□□□ 1.37
TMEM53-207ENST00000468117 ZNF445P59923 1031 aa23.59■■□□□ 1.37
TMEM53-207ENST00000468117 IKQ13123 557 aaPredicted RBP23.59■■□□□ 1.37
TMEM53-207ENST00000468117 GAS2L3Q86XJ1 694 aa23.59■■□□□ 1.37
TMEM53-207ENST00000468117 ZNF713Q8N859 430 aaPredicted RBP23.59■■□□□ 1.37
TMEM53-207ENST00000468117 GOLPH3LQ9H4A5 285 aa23.59■■□□□ 1.37
TMEM53-207ENST00000468117 PCDHA6Q9UN73 950 aa23.59■■□□□ 1.37
TMEM53-207ENST00000468117 PCDHA8Q9Y5H6 950 aa23.59■■□□□ 1.37
TMEM53-207ENST00000468117 PPP6R2O75170 966 aa23.58■■□□□ 1.37
TMEM53-207ENST00000468117 AXDND1Q5T1B0 1012 aaPredicted RBP23.58■■□□□ 1.37
TMEM53-207ENST00000468117 C6orf50Q9HD87 102 aa23.58■■□□□ 1.37
TMEM53-207ENST00000468117 NOL7Q9UMY1 257 aaKnown RBP23.58■■□□□ 1.37
TMEM53-207ENST00000468117 FSIP1Q8NA03 581 aa23.57■■□□□ 1.36
TMEM53-207ENST00000468117 ZNF341Q9BYN7 854 aa23.57■■□□□ 1.36
TMEM53-207ENST00000468117 SH2D4AQ9H788 454 aa23.57■■□□□ 1.36
TMEM53-207ENST00000468117 VCPKMTQ9H867 229 aa23.57■■□□□ 1.36
TMEM53-207ENST00000468117 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.57■■□□□ 1.36
TMEM53-207ENST00000468117 PITPNM2Q9BZ72 1349 aa23.57■■□□□ 1.36
TMEM53-207ENST00000468117 TRIM75PA6NK02 468 aa23.57■■□□□ 1.36
TMEM53-207ENST00000468117 GNA11P29992 359 aa23.57■■□□□ 1.36
TMEM53-207ENST00000468117 DEKP35659 375 aaKnown RBP23.57■■□□□ 1.36
TMEM53-207ENST00000468117 QRICH1Q2TAL8 776 aa23.57■■□□□ 1.36
TMEM53-207ENST00000468117 JMYQ8N9B5 988 aa23.57■■□□□ 1.36
TMEM53-207ENST00000468117 HOOK2Q96ED9 719 aa23.57■■□□□ 1.36
TMEM53-207ENST00000468117 PPP2R3BQ9Y5P8 575 aa23.57■■□□□ 1.36
TMEM53-207ENST00000468117 A0A1W2PQ27 194 aa23.56■■□□□ 1.36
TMEM53-207ENST00000468117 A0A1W2PQ64 194 aa23.56■■□□□ 1.36
TMEM53-207ENST00000468117 A0A1W2PQD8 194 aa23.56■■□□□ 1.36
TMEM53-207ENST00000468117 CDC37Q16543 378 aaPredicted RBP23.56■■□□□ 1.36
TMEM53-207ENST00000468117 FAM83BQ5T0W9 1011 aa23.56■■□□□ 1.36
TMEM53-207ENST00000468117 SSC5DA1L4H1 1573 aa23.56■■□□□ 1.36
TMEM53-207ENST00000468117 CCDC194A0A1B0GVG4 234 aa23.55■■□□□ 1.36
TMEM53-207ENST00000468117 TTC38Q5R3I4 469 aa23.55■■□□□ 1.36
TMEM53-207ENST00000468117 SYDE2Q5VT97 1194 aa23.55■■□□□ 1.36
TMEM53-207ENST00000468117 MRPS27Q92552 414 aaKnown RBP23.55■■□□□ 1.36
TMEM53-207ENST00000468117 WRNIP1Q96S55 665 aa23.55■■□□□ 1.36
TMEM53-207ENST00000468117 FEZ1Q99689 392 aa23.55■■□□□ 1.36
TMEM53-207ENST00000468117 SMCHD1A6NHR9 2005 aa23.55■■□□□ 1.36
TMEM53-207ENST00000468117 A0A1B0GVL5 298 aa23.55■■□□□ 1.36
TMEM53-207ENST00000468117 ESYT2A0FGR8 921 aa23.55■■□□□ 1.36
TMEM53-207ENST00000468117 GRIN3BO60391 1043 aa23.55■■□□□ 1.36
TMEM53-207ENST00000468117 SNAP25P60880 206 aa23.55■■□□□ 1.36
TMEM53-207ENST00000468117 BTNL9Q6UXG8 535 aa23.55■■□□□ 1.36
TMEM53-207ENST00000468117 DLK2Q6UY11 383 aa23.55■■□□□ 1.36
TMEM53-207ENST00000468117 CCDC73Q6ZRK6 1079 aa23.55■■□□□ 1.36
TMEM53-207ENST00000468117 ZKSCAN4Q969J2 545 aaPredicted RBP23.55■■□□□ 1.36
TMEM53-207ENST00000468117 L3MBTL3Q96JM7 780 aaPredicted RBP23.55■■□□□ 1.36
TMEM53-207ENST00000468117 CLIC6Q96NY7 704 aa23.55■■□□□ 1.36
TMEM53-207ENST00000468117 CEP131Q9UPN4 1083 aa23.55■■□□□ 1.36
TMEM53-207ENST00000468117 MRVI1Q9Y6F6 885 aa23.55■■□□□ 1.36
TMEM53-207ENST00000468117 GOLGA6L3A6NEY3 463 aa23.54■■□□□ 1.36
TMEM53-207ENST00000468117 STAT2P52630 851 aa23.54■■□□□ 1.36
TMEM53-207ENST00000468117 ZNF174Q15697 407 aa23.54■■□□□ 1.36
TMEM53-207ENST00000468117 CAMK4Q16566 473 aa23.54■■□□□ 1.36
TMEM53-207ENST00000468117 ZNF112Q9UJU3 913 aa23.54■■□□□ 1.36
TMEM53-207ENST00000468117 FSD2A1L4K1 749 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms