RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 BRWD3Q6RI45 1802 aa6.73□□□□□ -1.33
U2AF1-207ENST00000468039 NSD2O96028 1365 aa6.73□□□□□ -1.33
U2AF1-207ENST00000468039 FLT4P35916 1363 aa6.73□□□□□ -1.33
U2AF1-207ENST00000468039 TRIM37O94972 964 aa6.73□□□□□ -1.33
U2AF1-207ENST00000468039 TIAF1O95411 115 aa6.73□□□□□ -1.33
U2AF1-207ENST00000468039 BMP3P12645 472 aa6.73□□□□□ -1.33
U2AF1-207ENST00000468039 SSTR4P31391 388 aa6.73□□□□□ -1.33
U2AF1-207ENST00000468039 CD97P48960 835 aa6.73□□□□□ -1.33
U2AF1-207ENST00000468039 MRPL58Q14197 206 aaKnown RBP6.73□□□□□ -1.33
U2AF1-207ENST00000468039 MAP3K11Q16584 847 aa6.73□□□□□ -1.33
U2AF1-207ENST00000468039 KRT27Q7Z3Y8 459 aa6.73□□□□□ -1.33
U2AF1-207ENST00000468039 PDZD3Q86UT5 571 aa6.73□□□□□ -1.33
U2AF1-207ENST00000468039 STK35Q8TDR2 534 aa6.73□□□□□ -1.33
U2AF1-207ENST00000468039 MYRFLQ96LU7 910 aa6.73□□□□□ -1.33
U2AF1-207ENST00000468039 RAXQ9Y2V3 346 aa6.73□□□□□ -1.33
U2AF1-207ENST00000468039 DISP2A7MBM2 1401 aa6.73□□□□□ -1.33
U2AF1-207ENST00000468039 LRRC37A3O60309 1634 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 INSRP06213 1382 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 ZNF862O60290 1169 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 DRD2P14416 443 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 HSP90B1P14625 803 aaKnown RBP6.72□□□□□ -1.33
U2AF1-207ENST00000468039 LIG3P49916 1009 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 RPS26P62854 115 aaKnown RBP6.72□□□□□ -1.33
U2AF1-207ENST00000468039 ID3Q02535 119 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 ZNF252P-AS1Q0IIN9 211 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 DDX10Q13206 875 aaKnown RBP6.72□□□□□ -1.33
U2AF1-207ENST00000468039 PWP1Q13610 501 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 KIF4BQ2VIQ3 1234 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 FBLN7Q53RD9 439 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 NBPF6Q5VWK0 638 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 PRR23CQ6ZRP0 262 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 RELL1Q8IUW5 271 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 FAM20CQ8IXL6 584 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 TMEM87AQ8NBN3 555 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 GRIN3AQ8TCU5 1115 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 GPBAR1Q8TDU6 330 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 NBPF4Q96M43 638 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 ATXN3LQ9H3M9 355 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 PIDD1Q9HB75 910 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 PICK1Q9NRD5 415 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 STOML1Q9UBI4 398 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 THRAP3Q9Y2W1 955 aaKnown RBP6.72□□□□□ -1.33
U2AF1-207ENST00000468039 SMG6Q86US8 1419 aaKnown RBP6.72□□□□□ -1.33
U2AF1-207ENST00000468039 RGPD2P0DJD1 1756 aa6.72□□□□□ -1.33
U2AF1-207ENST00000468039 WNK3Q9BYP7 1800 aa6.71□□□□□ -1.33
U2AF1-207ENST00000468039 FAM208AQ9UK61 1670 aaKnown RBP6.71□□□□□ -1.33
U2AF1-207ENST00000468039 PARP4Q9UKK3 1724 aaKnown RBP6.71□□□□□ -1.34
U2AF1-207ENST00000468039 ASPAP45381 313 aa6.71□□□□□ -1.34
U2AF1-207ENST00000468039 EIF4A2Q14240 407 aaKnown RBP6.71□□□□□ -1.34
U2AF1-207ENST00000468039 DDB1Q16531 1140 aa6.71□□□□□ -1.34
U2AF1-207ENST00000468039 ARMC10Q8N2F6 343 aa6.71□□□□□ -1.34
U2AF1-207ENST00000468039 PCDHA4Q9UN74 947 aa6.71□□□□□ -1.34
U2AF1-207ENST00000468039 MEGF6O75095 1541 aa6.71□□□□□ -1.34
U2AF1-207ENST00000468039 KIF24Q5T7B8 1368 aa6.7□□□□□ -1.34
U2AF1-207ENST00000468039 C8AP07357 584 aa6.7□□□□□ -1.34
U2AF1-207ENST00000468039 IL2RBP14784 551 aa6.7□□□□□ -1.34
U2AF1-207ENST00000468039 RAB6AP20340 208 aa6.7□□□□□ -1.34
U2AF1-207ENST00000468039 MAP4P27816 1152 aaKnown RBP6.7□□□□□ -1.34
U2AF1-207ENST00000468039 MTHFSP49914 203 aa6.7□□□□□ -1.34
U2AF1-207ENST00000468039 TSNAXIP1Q2TAA8 658 aa6.7□□□□□ -1.34
U2AF1-207ENST00000468039 BEND4Q6ZU67 534 aa6.7□□□□□ -1.34
U2AF1-207ENST00000468039 CLEC10AQ8IUN9 316 aa6.7□□□□□ -1.34
U2AF1-207ENST00000468039 MARCH10Q8NA82 808 aaPredicted RBP6.7□□□□□ -1.34
U2AF1-207ENST00000468039 C2CD4AQ8NCU7 369 aaPredicted RBP6.7□□□□□ -1.34
U2AF1-207ENST00000468039 ELMO3Q96BJ8 720 aa6.7□□□□□ -1.34
U2AF1-207ENST00000468039 WDR89Q96FK6 387 aaPredicted RBP6.7□□□□□ -1.34
U2AF1-207ENST00000468039 MIR1-1HGQ9H1L0 117 aa6.7□□□□□ -1.34
U2AF1-207ENST00000468039 ACTL7BQ9Y614 415 aa6.7□□□□□ -1.34
U2AF1-207ENST00000468039 NPC1L1Q9UHC9 1359 aa6.69□□□□□ -1.34
U2AF1-207ENST00000468039 MAP2P11137 1827 aaKnown RBP6.69□□□□□ -1.34
U2AF1-207ENST00000468039 TNS2Q63HR2 1409 aa6.69□□□□□ -1.34
U2AF1-207ENST00000468039 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.69□□□□□ -1.34
U2AF1-207ENST00000468039 TMPRSS2O15393 492 aa6.69□□□□□ -1.34
U2AF1-207ENST00000468039 GSC2O15499 205 aa6.69□□□□□ -1.34
U2AF1-207ENST00000468039 MAP7Q14244 749 aa6.69□□□□□ -1.34
U2AF1-207ENST00000468039 SGO2Q562F6 1265 aa6.69□□□□□ -1.34
U2AF1-207ENST00000468039 PAOXQ6QHF9 649 aa6.69□□□□□ -1.34
U2AF1-207ENST00000468039 AGMOQ6ZNB7 445 aa6.69□□□□□ -1.34
U2AF1-207ENST00000468039 HS2ST1Q7LGA3 356 aa6.69□□□□□ -1.34
U2AF1-207ENST00000468039 MRRFQ96E11 262 aaKnown RBP6.69□□□□□ -1.34
U2AF1-207ENST00000468039 FAM83CQ9BQN1 747 aa6.69□□□□□ -1.34
U2AF1-207ENST00000468039 PPP1R9AQ9ULJ8 1098 aa6.69□□□□□ -1.34
U2AF1-207ENST00000468039 FAM95CA0A1B0GW59 222 aa6.68□□□□□ -1.34
U2AF1-207ENST00000468039 EXOC5O00471 708 aa6.68□□□□□ -1.34
U2AF1-207ENST00000468039 RNGTTO60942 597 aaKnown RBP6.68□□□□□ -1.34
U2AF1-207ENST00000468039 VAMP1P23763 118 aa6.68□□□□□ -1.34
U2AF1-207ENST00000468039 GBP2P32456 591 aaPredicted RBP6.68□□□□□ -1.34
U2AF1-207ENST00000468039 NFKBIBQ15653 356 aa6.68□□□□□ -1.34
U2AF1-207ENST00000468039 OGFOD2Q6N063 350 aa6.68□□□□□ -1.34
U2AF1-207ENST00000468039 PTF1AQ7RTS3 328 aa6.68□□□□□ -1.34
U2AF1-207ENST00000468039 DEFB132Q7Z7B7 95 aa6.68□□□□□ -1.34
U2AF1-207ENST00000468039 GIMAP7Q8NHV1 300 aa6.68□□□□□ -1.34
U2AF1-207ENST00000468039 FBLIM1Q8WUP2 373 aa6.68□□□□□ -1.34
U2AF1-207ENST00000468039 FANCD2OSQ96PS1 177 aa6.68□□□□□ -1.34
U2AF1-207ENST00000468039 RSRP1Q9BUV0 290 aa6.68□□□□□ -1.34
U2AF1-207ENST00000468039 SSU72Q9NP77 194 aaKnown RBP6.68□□□□□ -1.34
U2AF1-207ENST00000468039 CRIM1Q9NZV1 1036 aa6.68□□□□□ -1.34
U2AF1-207ENST00000468039 GGT7Q9UJ14 662 aa6.68□□□□□ -1.34
U2AF1-207ENST00000468039 OVOS2A0A0G2JMS6 1433 aa6.67□□□□□ -1.34
U2AF1-207ENST00000468039 COL3A1P02461 1466 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms