RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 PHF24Q9UPV7 400 aa20.61■□□□□ 0.89
TRIM56-203ENST00000467847 CNPY2Q9Y2B0 182 aa20.61■□□□□ 0.89
TRIM56-203ENST00000467847 POTEB2H3BUK9 544 aa20.6■□□□□ 0.89
TRIM56-203ENST00000467847 PRDM1O75626 825 aa20.6■□□□□ 0.89
TRIM56-203ENST00000467847 PGK1P00558 417 aa20.6■□□□□ 0.89
TRIM56-203ENST00000467847 SLC4A3P48751 1232 aa20.6■□□□□ 0.89
TRIM56-203ENST00000467847 LRRFIP1Q32MZ4 808 aaKnown RBP20.6■□□□□ 0.89
TRIM56-203ENST00000467847 C1orf53Q5VUE5 145 aa20.6■□□□□ 0.89
TRIM56-203ENST00000467847 PRPF38AQ8NAV1 312 aaKnown RBP20.6■□□□□ 0.89
TRIM56-203ENST00000467847 PDLIM7Q9NR12 457 aa20.6■□□□□ 0.89
TRIM56-203ENST00000467847 CTDP1Q9Y5B0 961 aaPredicted RBP20.6■□□□□ 0.89
TRIM56-203ENST00000467847 IGKV6D-41A0A0C4DH26 115 aa20.59■□□□□ 0.89
TRIM56-203ENST00000467847 ZNF865P0CJ78 1059 aaPredicted RBP20.59■□□□□ 0.89
TRIM56-203ENST00000467847 AKR1A1P14550 325 aa20.59■□□□□ 0.89
TRIM56-203ENST00000467847 BADQ92934 168 aa20.59■□□□□ 0.89
TRIM56-203ENST00000467847 KIFC2Q96AC6 838 aa20.59■□□□□ 0.89
TRIM56-203ENST00000467847 DDX11Q96FC9 970 aa20.59■□□□□ 0.89
TRIM56-203ENST00000467847 CEP95Q96GE4 821 aa20.59■□□□□ 0.89
TRIM56-203ENST00000467847 TTC41PQ6P2S7 1318 aa20.58■□□□□ 0.89
TRIM56-203ENST00000467847 PATL2C9JE40 543 aaKnown RBP20.58■□□□□ 0.89
TRIM56-203ENST00000467847 ZBED4O75132 1171 aa20.58■□□□□ 0.89
TRIM56-203ENST00000467847 SH3RF1Q7Z6J0 888 aa20.58■□□□□ 0.89
TRIM56-203ENST00000467847 CPXCR1Q8N123 301 aa20.58■□□□□ 0.89
TRIM56-203ENST00000467847 MSL3Q8N5Y2 521 aaKnown RBP20.58■□□□□ 0.89
TRIM56-203ENST00000467847 LENG1Q96BZ8 264 aaPredicted RBP20.58■□□□□ 0.89
TRIM56-203ENST00000467847 NACAP1Q9BZK3 213 aa20.58■□□□□ 0.89
TRIM56-203ENST00000467847 MTMR4Q9NYA4 1195 aa20.58■□□□□ 0.89
TRIM56-203ENST00000467847 RIPK3Q9Y572 518 aa20.58■□□□□ 0.89
TRIM56-203ENST00000467847 SYNGAP1Q96PV0 1343 aa20.57■□□□□ 0.88
TRIM56-203ENST00000467847 TRIM43BA6NCK2 446 aa20.57■□□□□ 0.88
TRIM56-203ENST00000467847 ATP2A1O14983 1001 aa20.57■□□□□ 0.88
TRIM56-203ENST00000467847 ERC2O15083 957 aa20.57■□□□□ 0.88
TRIM56-203ENST00000467847 TTLL1O95922 423 aa20.57■□□□□ 0.88
TRIM56-203ENST00000467847 TLE2Q04725 743 aa20.57■□□□□ 0.88
TRIM56-203ENST00000467847 SHHQ15465 462 aa20.57■□□□□ 0.88
TRIM56-203ENST00000467847 IFNL3Q8IZI9 196 aa20.57■□□□□ 0.88
TRIM56-203ENST00000467847 LRRC47Q8N1G4 583 aaKnown RBP20.57■□□□□ 0.88
TRIM56-203ENST00000467847 MKL1Q969V6 931 aa20.57■□□□□ 0.88
TRIM56-203ENST00000467847 TRIM43Q96BQ3 446 aaPredicted RBP20.57■□□□□ 0.88
TRIM56-203ENST00000467847 FEM1BQ9UK73 627 aa20.57■□□□□ 0.88
TRIM56-203ENST00000467847 SYNPO2Q9UMS6 1093 aa20.57■□□□□ 0.88
TRIM56-203ENST00000467847 MCM3APO60318 1980 aa20.56■□□□□ 0.88
TRIM56-203ENST00000467847 A0A1W2PQ45 241 aaPredicted RBP20.56■□□□□ 0.88
TRIM56-203ENST00000467847 A0A1W2PQY0 241 aa20.56■□□□□ 0.88
TRIM56-203ENST00000467847 C9orf50Q5SZB4 431 aa20.56■□□□□ 0.88
TRIM56-203ENST00000467847 GMCL1P1Q8NEA9 526 aa20.56■□□□□ 0.88
TRIM56-203ENST00000467847 SEC62Q99442 399 aaKnown RBP20.56■□□□□ 0.88
TRIM56-203ENST00000467847 FSD1Q9BTV5 496 aa20.56■□□□□ 0.88
TRIM56-203ENST00000467847 SLC38A10Q9HBR0 1119 aa20.56■□□□□ 0.88
TRIM56-203ENST00000467847 RAVER2Q9HCJ3 691 aaKnown RBP20.56■□□□□ 0.88
TRIM56-203ENST00000467847 FAM184BQ9ULE4 1060 aa20.56■□□□□ 0.88
TRIM56-203ENST00000467847 DNAJC25-GNG10A0A024R161 153 aa20.55■□□□□ 0.88
TRIM56-203ENST00000467847 SNAI1O95863 264 aaPredicted RBP20.55■□□□□ 0.88
TRIM56-203ENST00000467847 SLC3A2P08195 630 aaKnown RBP20.55■□□□□ 0.88
TRIM56-203ENST00000467847 CLTBP09497 229 aa20.55■□□□□ 0.88
TRIM56-203ENST00000467847 TSPY3P0CV98 308 aa20.55■□□□□ 0.88
TRIM56-203ENST00000467847 TSPY8P0CW00 308 aa20.55■□□□□ 0.88
TRIM56-203ENST00000467847 PDE4BQ07343 736 aa20.55■□□□□ 0.88
TRIM56-203ENST00000467847 MAMDC4Q6UXC1 1216 aa20.55■□□□□ 0.88
TRIM56-203ENST00000467847 MAFAQ8NHW3 353 aaPredicted RBP20.55■□□□□ 0.88
TRIM56-203ENST00000467847 PI4K2BQ8TCG2 481 aa20.55■□□□□ 0.88
TRIM56-203ENST00000467847 ZHX1Q9UKY1 873 aaPredicted RBP20.55■□□□□ 0.88
TRIM56-203ENST00000467847 TACC3Q9Y6A5 838 aa20.55■□□□□ 0.88
TRIM56-203ENST00000467847 PLIN4Q96Q06 1357 aa20.55■□□□□ 0.88
TRIM56-203ENST00000467847 SYNRGQ9UMZ2 1314 aa20.54■□□□□ 0.88
TRIM56-203ENST00000467847 PQBP1O60828 265 aaKnown RBP20.54■□□□□ 0.88
TRIM56-203ENST00000467847 ADAMTS4O75173 837 aa20.54■□□□□ 0.88
TRIM56-203ENST00000467847 SLFN13Q68D06 897 aa20.54■□□□□ 0.88
TRIM56-203ENST00000467847 ANKRD35Q8N283 1001 aa20.54■□□□□ 0.88
TRIM56-203ENST00000467847 NEDD1Q8NHV4 660 aa20.54■□□□□ 0.88
TRIM56-203ENST00000467847 OTUD7AQ8TE49 926 aaPredicted RBP20.54■□□□□ 0.88
TRIM56-203ENST00000467847 TSEN34Q9BSV6 310 aaKnown RBP20.54■□□□□ 0.88
TRIM56-203ENST00000467847 NAPBQ9H115 298 aa20.54■□□□□ 0.88
TRIM56-203ENST00000467847 PRDM6Q9NQX0 595 aa20.54■□□□□ 0.88
TRIM56-203ENST00000467847 FBXO40Q9UH90 709 aa20.54■□□□□ 0.88
TRIM56-203ENST00000467847 ISY1Q9ULR0 285 aaKnown RBP20.54■□□□□ 0.88
TRIM56-203ENST00000467847 PCDHB15Q9Y5E8 787 aa20.54■□□□□ 0.88
TRIM56-203ENST00000467847 BMP3P12645 472 aa20.53■□□□□ 0.88
TRIM56-203ENST00000467847 ACLYP53396 1101 aa20.53■□□□□ 0.88
TRIM56-203ENST00000467847 OAZ1P54368 228 aa20.53■□□□□ 0.88
TRIM56-203ENST00000467847 PPARAQ07869 468 aa20.53■□□□□ 0.88
TRIM56-203ENST00000467847 ZNF467Q7Z7K2 595 aaPredicted RBP20.53■□□□□ 0.88
TRIM56-203ENST00000467847 CDX2Q99626 313 aaPredicted RBP20.53■□□□□ 0.88
TRIM56-203ENST00000467847 MX1P20591 662 aa20.52■□□□□ 0.88
TRIM56-203ENST00000467847 TFAP4Q01664 338 aa20.52■□□□□ 0.88
TRIM56-203ENST00000467847 ZMYM1Q5SVZ6 1142 aa20.52■□□□□ 0.88
TRIM56-203ENST00000467847 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.52■□□□□ 0.88
TRIM56-203ENST00000467847 CHST13Q8NET6 341 aa20.52■□□□□ 0.88
TRIM56-203ENST00000467847 NUP133Q8WUM0 1156 aa20.52■□□□□ 0.88
TRIM56-203ENST00000467847 STARD7Q9NQZ5 370 aa20.52■□□□□ 0.88
TRIM56-203ENST00000467847 HOMER2Q9NSB8 354 aa20.52■□□□□ 0.88
TRIM56-203ENST00000467847 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.52■□□□□ 0.88
TRIM56-203ENST00000467847 MOXD2PA6NHM9 499 aa20.51■□□□□ 0.87
TRIM56-203ENST00000467847 KIAA0355O15063 1070 aa20.51■□□□□ 0.87
TRIM56-203ENST00000467847 DUSP11O75319 330 aaKnown RBP20.51■□□□□ 0.87
TRIM56-203ENST00000467847 RAG1P15918 1043 aa20.51■□□□□ 0.87
TRIM56-203ENST00000467847 ITGB8P26012 769 aa20.51■□□□□ 0.87
TRIM56-203ENST00000467847 ACVR2BQ13705 512 aa20.51■□□□□ 0.87
TRIM56-203ENST00000467847 KCNA10Q16322 511 aa20.51■□□□□ 0.87
TRIM56-203ENST00000467847 KLHDC9Q8NEP7 349 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms