RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 CLCN7P51798 805 aa6.16□□□□□ -1.42
SSR3-204ENST00000467733 CHRNA2Q15822 529 aa6.16□□□□□ -1.42
SSR3-204ENST00000467733 DTHD1Q6ZMT9 781 aa6.16□□□□□ -1.42
SSR3-204ENST00000467733 PDZD3Q86UT5 571 aa6.16□□□□□ -1.42
SSR3-204ENST00000467733 TCP11L2Q8N4U5 519 aa6.16□□□□□ -1.42
SSR3-204ENST00000467733 KCNB2Q92953 911 aa6.16□□□□□ -1.42
SSR3-204ENST00000467733 KRTAP4-11Q9BYQ6 195 aa6.16□□□□□ -1.42
SSR3-204ENST00000467733 PDGFDQ9GZP0 370 aaPredicted RBP6.16□□□□□ -1.42
SSR3-204ENST00000467733 NHSQ6T4R5 1651 aa6.16□□□□□ -1.42
SSR3-204ENST00000467733 COL5A2P05997 1499 aaPredicted RBP6.15□□□□□ -1.42
SSR3-204ENST00000467733 ADGRB1O14514 1584 aa6.15□□□□□ -1.42
SSR3-204ENST00000467733 PLSCR1O15162 318 aa6.15□□□□□ -1.42
SSR3-204ENST00000467733 XRCC5P13010 732 aaKnown RBP6.15□□□□□ -1.42
SSR3-204ENST00000467733 GRM2Q14416 872 aa6.15□□□□□ -1.42
SSR3-204ENST00000467733 ZC3H12AQ5D1E8 599 aaKnown RBP6.15□□□□□ -1.42
SSR3-204ENST00000467733 CILP2Q8IUL8 1156 aa6.15□□□□□ -1.42
SSR3-204ENST00000467733 SPACA3Q8IXA5 215 aa6.15□□□□□ -1.42
SSR3-204ENST00000467733 PRAM1Q96QH2 718 aa6.15□□□□□ -1.42
SSR3-204ENST00000467733 PRDM7Q9NQW5 492 aa6.15□□□□□ -1.42
SSR3-204ENST00000467733 PPP4R2Q9NY27 417 aa6.15□□□□□ -1.42
SSR3-204ENST00000467733 USP35Q9P2H5 1018 aa6.15□□□□□ -1.42
SSR3-204ENST00000467733 CTNND2Q9UQB3 1225 aa6.15□□□□□ -1.42
SSR3-204ENST00000467733 THRAP3Q9Y2W1 955 aaKnown RBP6.15□□□□□ -1.42
SSR3-204ENST00000467733 ARHGEF28Q8N1W1 1705 aaKnown RBP6.15□□□□□ -1.42
SSR3-204ENST00000467733 PRR36Q9H6K5 1346 aa6.15□□□□□ -1.43
SSR3-204ENST00000467733 CPDO75976 1380 aa6.15□□□□□ -1.43
SSR3-204ENST00000467733 AATKQ6ZMQ8 1374 aa6.15□□□□□ -1.43
SSR3-204ENST00000467733 BCL9O00512 1426 aa6.15□□□□□ -1.43
SSR3-204ENST00000467733 TUBGCP6Q96RT7 1819 aa6.14□□□□□ -1.43
SSR3-204ENST00000467733 EIF1AYO14602 144 aaKnown RBP6.14□□□□□ -1.43
SSR3-204ENST00000467733 SAFB2Q14151 953 aaKnown RBP eCLIP6.14□□□□□ -1.43
SSR3-204ENST00000467733 SIAH1Q8IUQ4 282 aa6.14□□□□□ -1.43
SSR3-204ENST00000467733 SULF2Q8IWU5 870 aa6.14□□□□□ -1.43
SSR3-204ENST00000467733 HEXIM2Q96MH2 286 aaKnown RBP6.14□□□□□ -1.43
SSR3-204ENST00000467733 EMILIN2Q9BXX0 1053 aa6.14□□□□□ -1.43
SSR3-204ENST00000467733 MTFR1LQ9H019 292 aa6.14□□□□□ -1.43
SSR3-204ENST00000467733 GNAT3A8MTJ3 354 aa6.13□□□□□ -1.43
SSR3-204ENST00000467733 GLI1P08151 1106 aa6.13□□□□□ -1.43
SSR3-204ENST00000467733 ZC3H6P61129 1189 aaKnown RBP6.13□□□□□ -1.43
SSR3-204ENST00000467733 ARHGAP4P98171 946 aa6.13□□□□□ -1.43
SSR3-204ENST00000467733 MPZL3Q6UWV2 235 aa6.13□□□□□ -1.43
SSR3-204ENST00000467733 LRRC56Q8IYG6 542 aaPredicted RBP6.13□□□□□ -1.43
SSR3-204ENST00000467733 C14orf93Q9H972 538 aaKnown RBP6.13□□□□□ -1.43
SSR3-204ENST00000467733 PRDM10Q9NQV6 1147 aa6.13□□□□□ -1.43
SSR3-204ENST00000467733 STK32BQ9NY57 414 aa6.13□□□□□ -1.43
SSR3-204ENST00000467733 LMCD1Q9NZU5 365 aa6.13□□□□□ -1.43
SSR3-204ENST00000467733 CRB1P82279 1406 aa6.13□□□□□ -1.43
SSR3-204ENST00000467733 BTAF1O14981 1849 aa6.13□□□□□ -1.43
SSR3-204ENST00000467733 KRTAP9-7A8MTY7 169 aa6.12□□□□□ -1.43
SSR3-204ENST00000467733 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.12□□□□□ -1.43
SSR3-204ENST00000467733 PATL2C9JE40 543 aaKnown RBP6.12□□□□□ -1.43
SSR3-204ENST00000467733 USP19O94966 1318 aa6.12□□□□□ -1.43
SSR3-204ENST00000467733 PDIA4P13667 645 aaKnown RBP6.12□□□□□ -1.43
SSR3-204ENST00000467733 ARNTP27540 789 aa6.12□□□□□ -1.43
SSR3-204ENST00000467733 CFPP27918 469 aa6.12□□□□□ -1.43
SSR3-204ENST00000467733 COL18A1P39060 1754 aa6.12□□□□□ -1.43
SSR3-204ENST00000467733 SERPINB4P48594 390 aa6.12□□□□□ -1.43
SSR3-204ENST00000467733 EVA1CP58658 441 aa6.12□□□□□ -1.43
SSR3-204ENST00000467733 RGL3Q3MIN7 710 aa6.12□□□□□ -1.43
SSR3-204ENST00000467733 FAM214BQ7L5A3 538 aa6.12□□□□□ -1.43
SSR3-204ENST00000467733 NGDNQ8NEJ9 315 aaKnown RBP6.12□□□□□ -1.43
SSR3-204ENST00000467733 KAT6BQ8WYB5 2073 aa6.12□□□□□ -1.43
SSR3-204ENST00000467733 ACSBG1Q96GR2 724 aa6.12□□□□□ -1.43
SSR3-204ENST00000467733 LIN37Q96GY3 246 aaPredicted RBP6.12□□□□□ -1.43
SSR3-204ENST00000467733 TRAIPQ9BWF2 469 aa6.12□□□□□ -1.43
SSR3-204ENST00000467733 PITPNM2Q9BZ72 1349 aa6.12□□□□□ -1.43
SSR3-204ENST00000467733 POGKQ9P215 609 aa6.12□□□□□ -1.43
SSR3-204ENST00000467733 PCNTO95613 3336 aa6.12□□□□□ -1.43
SSR3-204ENST00000467733 RGPD5Q99666 1765 aa6.11□□□□□ -1.43
SSR3-204ENST00000467733 TRPM1Q7Z4N2 1603 aa6.11□□□□□ -1.43
SSR3-204ENST00000467733 POLR3AO14802 1390 aaPredicted RBP6.11□□□□□ -1.43
SSR3-204ENST00000467733 GPR182O15218 404 aa6.11□□□□□ -1.43
SSR3-204ENST00000467733 NME2P22392 152 aa6.11□□□□□ -1.43
SSR3-204ENST00000467733 FCGRTP55899 365 aa6.11□□□□□ -1.43
SSR3-204ENST00000467733 KCNA1Q09470 495 aa6.11□□□□□ -1.43
SSR3-204ENST00000467733 SLC15A2Q16348 729 aa6.11□□□□□ -1.43
SSR3-204ENST00000467733 GPR162Q16538 588 aa6.11□□□□□ -1.43
SSR3-204ENST00000467733 ECM1Q16610 540 aa6.11□□□□□ -1.43
SSR3-204ENST00000467733 NKPD1Q17RQ9 610 aa6.11□□□□□ -1.43
SSR3-204ENST00000467733 MAP1SQ66K74 1059 aaPredicted RBP6.11□□□□□ -1.43
SSR3-204ENST00000467733 SYDE1Q6ZW31 735 aaPredicted RBP6.11□□□□□ -1.43
SSR3-204ENST00000467733 CYFIP1Q7L576 1253 aa6.11□□□□□ -1.43
SSR3-204ENST00000467733 C1QL4Q86Z23 238 aa6.11□□□□□ -1.43
SSR3-204ENST00000467733 TMC1Q8TDI8 760 aa6.11□□□□□ -1.43
SSR3-204ENST00000467733 ALKBH8Q96BT7 664 aaKnown RBP6.11□□□□□ -1.43
SSR3-204ENST00000467733 KIRREL1Q96J84 757 aa6.11□□□□□ -1.43
SSR3-204ENST00000467733 DMRTB1Q96MA1 342 aa6.11□□□□□ -1.43
SSR3-204ENST00000467733 CSRNP1Q96S65 589 aa6.11□□□□□ -1.43
SSR3-204ENST00000467733 NLRP2Q9NX02 1062 aa6.11□□□□□ -1.43
SSR3-204ENST00000467733 RAPGEFL1Q9UHV5 662 aa6.11□□□□□ -1.43
SSR3-204ENST00000467733 MAPK8IP1Q9UQF2 711 aa6.11□□□□□ -1.43
SSR3-204ENST00000467733 SLIT3O75094 1523 aa6.1□□□□□ -1.43
SSR3-204ENST00000467733 ATP10DQ9P241 1426 aa6.1□□□□□ -1.43
SSR3-204ENST00000467733 HSPA6P17066 643 aa6.1□□□□□ -1.43
SSR3-204ENST00000467733 DDB1Q16531 1140 aa6.1□□□□□ -1.43
SSR3-204ENST00000467733 TXNRD1Q16881 649 aa6.1□□□□□ -1.43
SSR3-204ENST00000467733 TMEM67Q5HYA8 995 aa6.1□□□□□ -1.43
SSR3-204ENST00000467733 LILRA6Q6PI73 481 aa6.1□□□□□ -1.43
SSR3-204ENST00000467733 PTF1AQ7RTS3 328 aa6.1□□□□□ -1.43
SSR3-204ENST00000467733 KCT2Q8NC54 265 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms