RNA–Protein interactions for RNA: ENST00000467574.5

PDCD4-205, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-205ENST00000467574 CHST3Q7LGC8 479 aa30.48■■■□□ 2.47
PDCD4-205ENST00000467574 RIOX2Q8IUF8 465 aa30.48■■■□□ 2.47
PDCD4-205ENST00000467574 CCAR1Q8IX12 1150 aaKnown RBP30.48■■■□□ 2.47
PDCD4-205ENST00000467574 RASEFQ8IZ41 740 aa30.48■■■□□ 2.47
PDCD4-205ENST00000467574 SH3TC2Q8TF17 1288 aa30.48■■■□□ 2.47
PDCD4-205ENST00000467574 CHURC1Q8WUH1 139 aa30.48■■■□□ 2.47
PDCD4-205ENST00000467574 SOCS4Q8WXH5 440 aa30.48■■■□□ 2.47
PDCD4-205ENST00000467574 KAT14Q9H8E8 782 aa30.48■■■□□ 2.47
PDCD4-205ENST00000467574 FRMPD2Q68DX3 1309 aaPredicted RBP30.47■■■□□ 2.47
PDCD4-205ENST00000467574 IFIT1BQ5T764 474 aaKnown RBP30.47■■■□□ 2.47
PDCD4-205ENST00000467574 RNF20Q5VTR2 975 aa30.47■■■□□ 2.47
PDCD4-205ENST00000467574 ZNF333Q96JL9 665 aa30.47■■■□□ 2.47
PDCD4-205ENST00000467574 SENP2Q9HC62 589 aa30.47■■■□□ 2.47
PDCD4-205ENST00000467574 PTPREP23469 700 aa30.46■■■□□ 2.47
PDCD4-205ENST00000467574 GRK4P32298 578 aa30.46■■■□□ 2.47
PDCD4-205ENST00000467574 STAT3P40763 770 aa30.46■■■□□ 2.47
PDCD4-205ENST00000467574 GRB14Q14449 540 aa30.46■■■□□ 2.47
PDCD4-205ENST00000467574 TSGA10IPQ3SY00 556 aa30.46■■■□□ 2.47
PDCD4-205ENST00000467574 KCNB2Q92953 911 aa30.46■■■□□ 2.47
PDCD4-205ENST00000467574 NUDT12Q9BQG2 462 aa30.46■■■□□ 2.47
PDCD4-205ENST00000467574 TEX13BQ9BXU2 312 aa30.46■■■□□ 2.47
PDCD4-205ENST00000467574 PRR12Q9ULL5 1215 aa30.46■■■□□ 2.47
PDCD4-205ENST00000467574 PLXNA1Q9UIW2 1896 aa30.45■■■□□ 2.47
PDCD4-205ENST00000467574 CCDC85CA6NKD9 419 aa30.45■■■□□ 2.47
PDCD4-205ENST00000467574 IFIT3O14879 490 aaKnown RBP30.45■■■□□ 2.47
PDCD4-205ENST00000467574 ADCY3O60266 1144 aa30.45■■■□□ 2.47
PDCD4-205ENST00000467574 REC8O95072 547 aa30.45■■■□□ 2.47
PDCD4-205ENST00000467574 IKQ13123 557 aaPredicted RBP30.45■■■□□ 2.47
PDCD4-205ENST00000467574 IFFO2Q5TF58 517 aa30.45■■■□□ 2.47
PDCD4-205ENST00000467574 WDR78Q5VTH9 848 aa30.45■■■□□ 2.47
PDCD4-205ENST00000467574 SLAIN1Q8ND83 568 aa30.45■■■□□ 2.47
PDCD4-205ENST00000467574 IGDCC4Q8TDY8 1250 aa30.45■■■□□ 2.47
PDCD4-205ENST00000467574 PXYLP1Q8TE99 480 aa30.45■■■□□ 2.47
PDCD4-205ENST00000467574 MROH8Q9H579 483 aa30.45■■■□□ 2.47
PDCD4-205ENST00000467574 GPCPD1Q9NPB8 672 aa30.45■■■□□ 2.47
PDCD4-205ENST00000467574 ZNF536O15090 1300 aa30.45■■■□□ 2.46
PDCD4-205ENST00000467574 SLC15A5A6NIM6 579 aa30.44■■■□□ 2.46
PDCD4-205ENST00000467574 ZBED4O75132 1171 aa30.44■■■□□ 2.46
PDCD4-205ENST00000467574 SLC25A27O95847 323 aa30.44■■■□□ 2.46
PDCD4-205ENST00000467574 FDX1P10109 184 aa30.44■■■□□ 2.46
PDCD4-205ENST00000467574 ELNP15502 786 aa30.44■■■□□ 2.46
PDCD4-205ENST00000467574 SLC16A2P36021 539 aa30.44■■■□□ 2.46
PDCD4-205ENST00000467574 NCAPG2Q86XI2 1143 aa30.44■■■□□ 2.46
PDCD4-205ENST00000467574 RIPK3Q9Y572 518 aa30.44■■■□□ 2.46
PDCD4-205ENST00000467574 HSPA4P34932 840 aa30.43■■■□□ 2.46
PDCD4-205ENST00000467574 OAZ1P54368 228 aa30.43■■■□□ 2.46
PDCD4-205ENST00000467574 SNRNP48Q6IEG0 339 aaKnown RBP30.43■■■□□ 2.46
PDCD4-205ENST00000467574 CWC22Q9HCG8 908 aaKnown RBP30.43■■■□□ 2.46
PDCD4-205ENST00000467574 RAVER2Q9HCJ3 691 aaKnown RBP30.43■■■□□ 2.46
PDCD4-205ENST00000467574 MYH6P13533 1939 aa30.42■■■□□ 2.46
PDCD4-205ENST00000467574 PRC1O43663 620 aa30.42■■■□□ 2.46
PDCD4-205ENST00000467574 CAPN15O75808 1086 aa30.42■■■□□ 2.46
PDCD4-205ENST00000467574 MCM5P33992 734 aa30.42■■■□□ 2.46
PDCD4-205ENST00000467574 MAP2K5Q13163 448 aa30.42■■■□□ 2.46
PDCD4-205ENST00000467574 ADCK5Q3MIX3 580 aa30.42■■■□□ 2.46
PDCD4-205ENST00000467574 TMEM67Q5HYA8 995 aa30.42■■■□□ 2.46
PDCD4-205ENST00000467574 GPATCH4Q5T3I0 446 aaKnown RBP30.42■■■□□ 2.46
PDCD4-205ENST00000467574 SYDE2Q5VT97 1194 aa30.42■■■□□ 2.46
PDCD4-205ENST00000467574 CPXCR1Q8N123 301 aa30.42■■■□□ 2.46
PDCD4-205ENST00000467574 MTA3Q9BTC8 594 aa30.42■■■□□ 2.46
PDCD4-205ENST00000467574 LY9Q9HBG7 655 aa30.42■■■□□ 2.46
PDCD4-205ENST00000467574 GPHNQ9NQX3 736 aaPredicted RBP30.42■■■□□ 2.46
PDCD4-205ENST00000467574 IVNS1ABPQ9Y6Y0 642 aa30.42■■■□□ 2.46
PDCD4-205ENST00000467574 GOLGA8HP0CJ92 632 aa30.41■■■□□ 2.46
PDCD4-205ENST00000467574 XRCC5P13010 732 aaKnown RBP30.41■■■□□ 2.46
PDCD4-205ENST00000467574 CYP2B6P20813 491 aa30.41■■■□□ 2.46
PDCD4-205ENST00000467574 COPB2P35606 906 aa30.41■■■□□ 2.46
PDCD4-205ENST00000467574 RGS2P41220 211 aa30.41■■■□□ 2.46
PDCD4-205ENST00000467574 SNAP25P60880 206 aa30.41■■■□□ 2.46
PDCD4-205ENST00000467574 WTAPQ15007 396 aa30.41■■■□□ 2.46
PDCD4-205ENST00000467574 SART3Q15020 963 aaKnown RBP30.41■■■□□ 2.46
PDCD4-205ENST00000467574 APBA2Q99767 749 aa30.41■■■□□ 2.46
PDCD4-205ENST00000467574 RANBP17Q9H2T7 1088 aaKnown RBP30.41■■■□□ 2.46
PDCD4-205ENST00000467574 EPB41L2O43491 1005 aaKnown RBP30.4■■■□□ 2.46
PDCD4-205ENST00000467574 STRNO43815 780 aa30.4■■■□□ 2.46
PDCD4-205ENST00000467574 HOXC6P09630 235 aa30.4■■■□□ 2.46
PDCD4-205ENST00000467574 ASPRV1Q53RT3 343 aa30.4■■■□□ 2.46
PDCD4-205ENST00000467574 NBPF11Q86T75 865 aa30.4■■■□□ 2.46
PDCD4-205ENST00000467574 ABRAQ8N0Z2 381 aa30.4■■■□□ 2.46
PDCD4-205ENST00000467574 TRIB2Q92519 343 aa30.4■■■□□ 2.46
PDCD4-205ENST00000467574 ERICH2A1L162 156 aa30.39■■■□□ 2.46
PDCD4-205ENST00000467574 SH2B2O14492 632 aaPredicted RBP30.39■■■□□ 2.46
PDCD4-205ENST00000467574 ADORA2AP29274 412 aa30.39■■■□□ 2.46
PDCD4-205ENST00000467574 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.39■■■□□ 2.46
PDCD4-205ENST00000467574 NEK1Q96PY6 1258 aa30.39■■■□□ 2.46
PDCD4-205ENST00000467574 CPVLQ9H3G5 476 aa30.39■■■□□ 2.46
PDCD4-205ENST00000467574 CTDP1Q9Y5B0 961 aaPredicted RBP30.39■■■□□ 2.46
PDCD4-205ENST00000467574 INHAP05111 366 aa30.38■■■□□ 2.45
PDCD4-205ENST00000467574 ZKSCAN1P17029 563 aaPredicted RBP30.38■■■□□ 2.45
PDCD4-205ENST00000467574 TMEM87BQ96K49 555 aa30.38■■■□□ 2.45
PDCD4-205ENST00000467574 AGBL1Q96MI9 1066 aa30.38■■■□□ 2.45
PDCD4-205ENST00000467574 USP26Q9BXU7 913 aa30.38■■■□□ 2.45
PDCD4-205ENST00000467574 SNX14Q9Y5W7 946 aa30.38■■■□□ 2.45
PDCD4-205ENST00000467574 BAZ2BQ9UIF8 2168 aaKnown RBP30.38■■■□□ 2.45
PDCD4-205ENST00000467574 PARP1P09874 1014 aaKnown RBP30.37■■■□□ 2.45
PDCD4-205ENST00000467574 TROAPQ12815 778 aa30.37■■■□□ 2.45
PDCD4-205ENST00000467574 KRT32Q14532 448 aa30.37■■■□□ 2.45
PDCD4-205ENST00000467574 MTFR1Q15390 333 aa30.37■■■□□ 2.45
PDCD4-205ENST00000467574 CCL14Q16627 93 aa30.37■■■□□ 2.45
PDCD4-205ENST00000467574 NPLOC4Q8TAT6 608 aa30.37■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms