RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 LHX8Q68G74 356 aa21.45■■□□□ 1.02
CGREF1-208ENST00000467539 RCSD1Q6JBY9 416 aa21.45■■□□□ 1.02
CGREF1-208ENST00000467539 KIFC2Q96AC6 838 aa21.45■■□□□ 1.02
CGREF1-208ENST00000467539 TTC14Q96N46 770 aa21.45■■□□□ 1.02
CGREF1-208ENST00000467539 HTATIP2Q9BUP3 242 aa21.45■■□□□ 1.02
CGREF1-208ENST00000467539 TEX13BQ9BXU2 312 aa21.45■■□□□ 1.02
CGREF1-208ENST00000467539 NBPF3Q9H094 633 aa21.45■■□□□ 1.02
CGREF1-208ENST00000467539 RNF41Q9H4P4 317 aaPredicted RBP21.45■■□□□ 1.02
CGREF1-208ENST00000467539 SLC38A10Q9HBR0 1119 aa21.45■■□□□ 1.02
CGREF1-208ENST00000467539 A0A0G2JMZ2 1700 aa21.45■■□□□ 1.02
CGREF1-208ENST00000467539 TMEM232C9JQI7 657 aa21.44■■□□□ 1.02
CGREF1-208ENST00000467539 SLC1A4P43007 532 aa21.44■■□□□ 1.02
CGREF1-208ENST00000467539 NT5C2P49902 561 aa21.44■■□□□ 1.02
CGREF1-208ENST00000467539 RRP12Q5JTH9 1297 aaKnown RBP21.44■■□□□ 1.02
CGREF1-208ENST00000467539 FAM160B2Q86V87 743 aa21.44■■□□□ 1.02
CGREF1-208ENST00000467539 PAWRQ96IZ0 340 aaKnown RBP21.44■■□□□ 1.02
CGREF1-208ENST00000467539 MMP19Q99542 508 aa21.44■■□□□ 1.02
CGREF1-208ENST00000467539 CTDP1Q9Y5B0 961 aaPredicted RBP21.44■■□□□ 1.02
CGREF1-208ENST00000467539 CYP2C19P33261 490 aa21.43■■□□□ 1.02
CGREF1-208ENST00000467539 OAZ1P54368 228 aa21.43■■□□□ 1.02
CGREF1-208ENST00000467539 KCTD2Q14681 263 aa21.43■■□□□ 1.02
CGREF1-208ENST00000467539 NECAB2Q7Z6G3 386 aa21.43■■□□□ 1.02
CGREF1-208ENST00000467539 DPF3Q92784 378 aa21.43■■□□□ 1.02
CGREF1-208ENST00000467539 CTNNA3Q9UI47 895 aa21.43■■□□□ 1.02
CGREF1-208ENST00000467539 DIS3Q9Y2L1 958 aaKnown RBP21.43■■□□□ 1.02
CGREF1-208ENST00000467539 PARP14Q460N5 1801 aa21.43■■□□□ 1.02
CGREF1-208ENST00000467539 MYH4Q9Y623 1939 aa21.43■■□□□ 1.02
CGREF1-208ENST00000467539 TOP1P11387 765 aaKnown RBP21.42■■□□□ 1.02
CGREF1-208ENST00000467539 MNX1P50219 401 aaPredicted RBP21.42■■□□□ 1.02
CGREF1-208ENST00000467539 STAT2P52630 851 aa21.42■■□□□ 1.02
CGREF1-208ENST00000467539 SNRNP48Q6IEG0 339 aaKnown RBP21.42■■□□□ 1.02
CGREF1-208ENST00000467539 TBC1D10CQ8IV04 446 aa21.42■■□□□ 1.02
CGREF1-208ENST00000467539 CPXCR1Q8N123 301 aa21.42■■□□□ 1.02
CGREF1-208ENST00000467539 MAML3Q96JK9 1138 aa21.42■■□□□ 1.02
CGREF1-208ENST00000467539 TMEM47Q9BQJ4 181 aa21.42■■□□□ 1.02
CGREF1-208ENST00000467539 RIPK3Q9Y572 518 aa21.42■■□□□ 1.02
CGREF1-208ENST00000467539 CHMLP26374 656 aa21.41■■□□□ 1.02
CGREF1-208ENST00000467539 ZNF792Q3KQV3 632 aa21.41■■□□□ 1.02
CGREF1-208ENST00000467539 ESR2Q92731 530 aa21.41■■□□□ 1.02
CGREF1-208ENST00000467539 RAVER2Q9HCJ3 691 aaKnown RBP21.41■■□□□ 1.02
CGREF1-208ENST00000467539 MSCO60682 206 aa21.4■■□□□ 1.02
CGREF1-208ENST00000467539 IMMTQ16891 758 aaKnown RBP21.4■■□□□ 1.02
CGREF1-208ENST00000467539 KCTD1Q719H9 257 aa21.4■■□□□ 1.02
CGREF1-208ENST00000467539 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.4■■□□□ 1.02
CGREF1-208ENST00000467539 TRPV1Q8NER1 839 aa21.4■■□□□ 1.02
CGREF1-208ENST00000467539 DCAF4Q8WV16 495 aa21.4■■□□□ 1.02
CGREF1-208ENST00000467539 RUFY2Q8WXA3 655 aa21.4■■□□□ 1.02
CGREF1-208ENST00000467539 PGK2P07205 417 aa21.39■■□□□ 1.01
CGREF1-208ENST00000467539 CYBAP13498 195 aa21.39■■□□□ 1.01
CGREF1-208ENST00000467539 CNGA1P29973 690 aa21.39■■□□□ 1.01
CGREF1-208ENST00000467539 CHST13Q8NET6 341 aa21.39■■□□□ 1.01
CGREF1-208ENST00000467539 CHMP4CQ96CF2 233 aa21.39■■□□□ 1.01
CGREF1-208ENST00000467539 IL25Q9H293 177 aa21.39■■□□□ 1.01
CGREF1-208ENST00000467539 FBXO40Q9UH90 709 aa21.39■■□□□ 1.01
CGREF1-208ENST00000467539 DDX20Q9UHI6 824 aaKnown RBP21.39■■□□□ 1.01
CGREF1-208ENST00000467539 SLC4A3P48751 1232 aa21.38■■□□□ 1.01
CGREF1-208ENST00000467539 IKQ13123 557 aaPredicted RBP21.38■■□□□ 1.01
CGREF1-208ENST00000467539 CCDC178Q5BJE1 867 aa21.38■■□□□ 1.01
CGREF1-208ENST00000467539 BTNL9Q6UXG8 535 aa21.38■■□□□ 1.01
CGREF1-208ENST00000467539 DGKHQ86XP1 1220 aa21.38■■□□□ 1.01
CGREF1-208ENST00000467539 DIS3LQ8TF46 1054 aaKnown RBP21.38■■□□□ 1.01
CGREF1-208ENST00000467539 DDX11Q96FC9 970 aa21.38■■□□□ 1.01
CGREF1-208ENST00000467539 ISY1Q9ULR0 285 aaKnown RBP21.38■■□□□ 1.01
CGREF1-208ENST00000467539 NR2E3Q9Y5X4 410 aa21.38■■□□□ 1.01
CGREF1-208ENST00000467539 COL11A1P12107 1806 aaPredicted RBP21.38■■□□□ 1.01
CGREF1-208ENST00000467539 ZNF236Q9UL36 1845 aa21.38■■□□□ 1.01
CGREF1-208ENST00000467539 ZNFX1Q9P2E3 1918 aaKnown RBP21.37■■□□□ 1.01
CGREF1-208ENST00000467539 RAD50Q92878 1312 aa21.37■■□□□ 1.01
CGREF1-208ENST00000467539 DNAJC25-GNG10A0A024R161 153 aa21.37■■□□□ 1.01
CGREF1-208ENST00000467539 H0YGN5 161 aa21.37■■□□□ 1.01
CGREF1-208ENST00000467539 PRAMEF19Q5SWL8 479 aa21.37■■□□□ 1.01
CGREF1-208ENST00000467539 ANKS1AQ92625 1134 aa21.37■■□□□ 1.01
CGREF1-208ENST00000467539 TINF2Q9BSI4 451 aa21.37■■□□□ 1.01
CGREF1-208ENST00000467539 NRBP1Q9UHY1 535 aa21.37■■□□□ 1.01
CGREF1-208ENST00000467539 PRR12Q9ULL5 1215 aa21.37■■□□□ 1.01
CGREF1-208ENST00000467539 ZNF536O15090 1300 aa21.36■■□□□ 1.01
CGREF1-208ENST00000467539 NEDD4P46934 1319 aa21.36■■□□□ 1.01
CGREF1-208ENST00000467539 MSL3Q8N5Y2 521 aaKnown RBP21.36■■□□□ 1.01
CGREF1-208ENST00000467539 C11orf49Q9H6J7 331 aa21.36■■□□□ 1.01
CGREF1-208ENST00000467539 ZSWIM5Q9P217 1185 aa21.36■■□□□ 1.01
CGREF1-208ENST00000467539 MTMR7Q9Y216 660 aa21.36■■□□□ 1.01
CGREF1-208ENST00000467539 SEPT4O43236 478 aa21.35■■□□□ 1.01
CGREF1-208ENST00000467539 KDM4AO75164 1064 aa21.35■■□□□ 1.01
CGREF1-208ENST00000467539 COL6A1P12109 1028 aa21.35■■□□□ 1.01
CGREF1-208ENST00000467539 TKFCQ3LXA3 575 aa21.35■■□□□ 1.01
CGREF1-208ENST00000467539 TTBK2Q6IQ55 1244 aa21.35■■□□□ 1.01
CGREF1-208ENST00000467539 IQCA1Q86XH1 822 aa21.35■■□□□ 1.01
CGREF1-208ENST00000467539 ANKRD35Q8N283 1001 aa21.35■■□□□ 1.01
CGREF1-208ENST00000467539 AGBL1Q96MI9 1066 aa21.35■■□□□ 1.01
CGREF1-208ENST00000467539 KRT23Q9C075 422 aa21.35■■□□□ 1.01
CGREF1-208ENST00000467539 CNNM2Q9H8M5 875 aa21.35■■□□□ 1.01
CGREF1-208ENST00000467539 EVI5O60447 810 aa21.34■■□□□ 1.01
CGREF1-208ENST00000467539 SNHG28P0DPA3 235 aa21.34■■□□□ 1.01
CGREF1-208ENST00000467539 PDHBP11177 359 aa21.34■■□□□ 1.01
CGREF1-208ENST00000467539 CCDC96Q2M329 555 aa21.34■■□□□ 1.01
CGREF1-208ENST00000467539 MAMDC4Q6UXC1 1216 aa21.34■■□□□ 1.01
CGREF1-208ENST00000467539 CENPQQ7L2Z9 268 aaPredicted RBP21.34■■□□□ 1.01
CGREF1-208ENST00000467539 ZNF467Q7Z7K2 595 aaPredicted RBP21.34■■□□□ 1.01
CGREF1-208ENST00000467539 ZKSCAN3Q9BRR0 538 aa21.34■■□□□ 1.01
CGREF1-208ENST00000467539 B4E1Z4 1266 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms