RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 CCT2P78371 535 aaKnown RBP17.13■□□□□ 0.33
DDX56-208ENST00000467318 KIF23Q02241 960 aaPredicted RBP17.13■□□□□ 0.33
DDX56-208ENST00000467318 COG2Q14746 738 aa17.13■□□□□ 0.33
DDX56-208ENST00000467318 CPLX2Q6PUV4 134 aaKnown RBP17.13■□□□□ 0.33
DDX56-208ENST00000467318 PRPF38AQ8NAV1 312 aaKnown RBP17.13■□□□□ 0.33
DDX56-208ENST00000467318 TMX3Q96JJ7 454 aa17.13■□□□□ 0.33
DDX56-208ENST00000467318 GPCPD1Q9NPB8 672 aa17.13■□□□□ 0.33
DDX56-208ENST00000467318 FAM217BQ9NTX9 383 aaPredicted RBP17.13■□□□□ 0.33
DDX56-208ENST00000467318 PNMA3Q9UL41 463 aa17.13■□□□□ 0.33
DDX56-208ENST00000467318 MYPNQ86TC9 1320 aa17.13■□□□□ 0.33
DDX56-208ENST00000467318 CPLX1O14810 134 aa17.13■□□□□ 0.33
DDX56-208ENST00000467318 AOC2O75106 756 aa17.13■□□□□ 0.33
DDX56-208ENST00000467318 FLOT1O75955 427 aa17.13■□□□□ 0.33
DDX56-208ENST00000467318 OSBPP22059 807 aa17.13■□□□□ 0.33
DDX56-208ENST00000467318 CDC27P30260 824 aa17.13■□□□□ 0.33
DDX56-208ENST00000467318 ADD1P35611 737 aaKnown RBP17.13■□□□□ 0.33
DDX56-208ENST00000467318 VEGFBP49765 207 aa17.13■□□□□ 0.33
DDX56-208ENST00000467318 SCRN1Q12765 414 aa17.13■□□□□ 0.33
DDX56-208ENST00000467318 IKQ13123 557 aaPredicted RBP17.13■□□□□ 0.33
DDX56-208ENST00000467318 GTF3C6Q969F1 213 aa17.13■□□□□ 0.33
DDX56-208ENST00000467318 PTPN18Q99952 460 aa17.13■□□□□ 0.33
DDX56-208ENST00000467318 K7ELQ4 463 aaPredicted RBP17.12■□□□□ 0.33
DDX56-208ENST00000467318 LARGE1O95461 756 aa17.12■□□□□ 0.33
DDX56-208ENST00000467318 FDX1P10109 184 aa17.12■□□□□ 0.33
DDX56-208ENST00000467318 IRX3P78415 501 aaPredicted RBP17.12■□□□□ 0.33
DDX56-208ENST00000467318 L1TD1Q5T7N2 865 aaKnown RBP17.12■□□□□ 0.33
DDX56-208ENST00000467318 TTBK2Q6IQ55 1244 aa17.12■□□□□ 0.33
DDX56-208ENST00000467318 TMTC3Q6ZXV5 915 aa17.12■□□□□ 0.33
DDX56-208ENST00000467318 IFNL1Q8IU54 200 aa17.12■□□□□ 0.33
DDX56-208ENST00000467318 SLF1Q9BQI6 1058 aa17.12■□□□□ 0.33
DDX56-208ENST00000467318 SPZ1Q9BXG8 430 aa17.12■□□□□ 0.33
DDX56-208ENST00000467318 PDHXO00330 501 aa17.11■□□□□ 0.33
DDX56-208ENST00000467318 CDKL5O76039 1030 aa17.11■□□□□ 0.33
DDX56-208ENST00000467318 MCM4P33991 863 aa17.11■□□□□ 0.33
DDX56-208ENST00000467318 ASCC2Q9H1I8 757 aaPredicted RBP17.11■□□□□ 0.33
DDX56-208ENST00000467318 RIOX1Q9H6W3 641 aa17.11■□□□□ 0.33
DDX56-208ENST00000467318 NCOA5Q9HCD5 579 aaKnown RBP17.11■□□□□ 0.33
DDX56-208ENST00000467318 PPP1R9AQ9ULJ8 1098 aa17.11■□□□□ 0.33
DDX56-208ENST00000467318 ALDH1A1P00352 501 aa17.1■□□□□ 0.33
DDX56-208ENST00000467318 IFNAR1P17181 557 aa17.1■□□□□ 0.33
DDX56-208ENST00000467318 DSG3P32926 999 aa17.1■□□□□ 0.33
DDX56-208ENST00000467318 NTRK3Q16288 839 aa17.1■□□□□ 0.33
DDX56-208ENST00000467318 SYDE2Q5VT97 1194 aa17.1■□□□□ 0.33
DDX56-208ENST00000467318 FAM43AQ8N2R8 423 aa17.1■□□□□ 0.33
DDX56-208ENST00000467318 SRBD1Q8N5C6 995 aaKnown RBP17.1■□□□□ 0.33
DDX56-208ENST00000467318 NECAB1Q8N987 351 aa17.1■□□□□ 0.33
DDX56-208ENST00000467318 UBA5Q9GZZ9 404 aa17.1■□□□□ 0.33
DDX56-208ENST00000467318 FBXO28Q9NVF7 368 aa17.1■□□□□ 0.33
DDX56-208ENST00000467318 DDX11L8A8MPP1 907 aa17.1■□□□□ 0.33
DDX56-208ENST00000467318 IGF2BP3O00425 579 aaKnown RBP eCLIP17.1■□□□□ 0.33
DDX56-208ENST00000467318 PLEKHA8P1O95397 391 aa17.1■□□□□ 0.33
DDX56-208ENST00000467318 SLC16A2P36021 539 aa17.1■□□□□ 0.33
DDX56-208ENST00000467318 LBX2Q6XYB7 198 aa17.1■□□□□ 0.33
DDX56-208ENST00000467318 ADGRF4Q8IZF3 695 aa17.1■□□□□ 0.33
DDX56-208ENST00000467318 GTF3C2Q8WUA4 911 aaPredicted RBP17.1■□□□□ 0.33
DDX56-208ENST00000467318 KIFC2Q96AC6 838 aa17.1■□□□□ 0.33
DDX56-208ENST00000467318 PARK7Q99497 189 aaKnown RBP17.1■□□□□ 0.33
DDX56-208ENST00000467318 RBM27Q9P2N5 1060 aaKnown RBP17.1■□□□□ 0.33
DDX56-208ENST00000467318 PRR12Q9ULL5 1215 aa17.1■□□□□ 0.33
DDX56-208ENST00000467318 ADAMTS5Q9UNA0 930 aa17.1■□□□□ 0.33
DDX56-208ENST00000467318 CYTH3O43739 400 aa17.09■□□□□ 0.33
DDX56-208ENST00000467318 FUT2Q10981 343 aa17.09■□□□□ 0.33
DDX56-208ENST00000467318 NBPF11Q86T75 865 aa17.09■□□□□ 0.33
DDX56-208ENST00000467318 CCDC83Q8IWF9 413 aa17.09■□□□□ 0.33
DDX56-208ENST00000467318 CCDC82Q8N4S0 544 aa17.09■□□□□ 0.33
DDX56-208ENST00000467318 MB21D1Q8N884 522 aa17.09■□□□□ 0.33
DDX56-208ENST00000467318 LLPHQ9BRT6 129 aaKnown RBP17.09■□□□□ 0.33
DDX56-208ENST00000467318 SPDYE16A6NNV3 312 aaPredicted RBP17.08■□□□□ 0.32
DDX56-208ENST00000467318 HERVK_113P62684 666 aa17.08■□□□□ 0.32
DDX56-208ENST00000467318 CUL4AQ13619 759 aa17.08■□□□□ 0.32
DDX56-208ENST00000467318 TRIM22Q8IYM9 498 aa17.08■□□□□ 0.32
DDX56-208ENST00000467318 CMTR1Q8N1G2 835 aaKnown RBP17.08■□□□□ 0.32
DDX56-208ENST00000467318 SMCR8Q8TEV9 937 aaPredicted RBP17.08■□□□□ 0.32
DDX56-208ENST00000467318 P2RX7Q99572 595 aaKnown RBP17.08■□□□□ 0.32
DDX56-208ENST00000467318 RNF26Q9BY78 433 aaPredicted RBP17.08■□□□□ 0.32
DDX56-208ENST00000467318 CPVLQ9H3G5 476 aa17.08■□□□□ 0.32
DDX56-208ENST00000467318 JMJD4Q9H9V9 463 aa17.08■□□□□ 0.32
DDX56-208ENST00000467318 VWA5AO00534 786 aa17.07■□□□□ 0.32
DDX56-208ENST00000467318 ZBED4O75132 1171 aa17.07■□□□□ 0.32
DDX56-208ENST00000467318 GCLCP48506 637 aaPredicted RBP17.07■□□□□ 0.32
DDX56-208ENST00000467318 AKAP17AQ02040 695 aaKnown RBP17.07■□□□□ 0.32
DDX56-208ENST00000467318 MTMR8Q96EF0 704 aa17.07■□□□□ 0.32
DDX56-208ENST00000467318 RRP36Q96EU6 259 aaKnown RBP17.07■□□□□ 0.32
DDX56-208ENST00000467318 RANBP17Q9H2T7 1088 aaKnown RBP17.07■□□□□ 0.32
DDX56-208ENST00000467318 SLC38A10Q9HBR0 1119 aa17.07■□□□□ 0.32
DDX56-208ENST00000467318 VAT1LQ9HCJ6 419 aa17.07■□□□□ 0.32
DDX56-208ENST00000467318 PNMA2Q9UL42 364 aa17.07■□□□□ 0.32
DDX56-208ENST00000467318 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.07■□□□□ 0.32
DDX56-208ENST00000467318 CNTNAP5Q8WYK1 1306 aa17.07■□□□□ 0.32
DDX56-208ENST00000467318 PRPF3O43395 683 aaKnown RBP17.07■□□□□ 0.32
DDX56-208ENST00000467318 DDIT3P35638 169 aa17.07■□□□□ 0.32
DDX56-208ENST00000467318 SSRP1Q08945 709 aaKnown RBP17.07■□□□□ 0.32
DDX56-208ENST00000467318 ST3GAL1Q11201 340 aa17.07■□□□□ 0.32
DDX56-208ENST00000467318 TAF1CQ15572 869 aaPredicted RBP17.07■□□□□ 0.32
DDX56-208ENST00000467318 SAMD1Q6SPF0 538 aaPredicted RBP17.07■□□□□ 0.32
DDX56-208ENST00000467318 SPRYD3Q8NCJ5 442 aa17.07■□□□□ 0.32
DDX56-208ENST00000467318 ATG4CQ96DT6 458 aa17.07■□□□□ 0.32
DDX56-208ENST00000467318 INTS4Q96HW7 963 aaKnown RBP17.07■□□□□ 0.32
DDX56-208ENST00000467318 SEC63Q9UGP8 760 aaKnown RBP17.07■□□□□ 0.32
DDX56-208ENST00000467318 CTDP1Q9Y5B0 961 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms