RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 CRACR2BQ8N4Y2 399 aaPredicted RBP5.79□□□□□ -1.48
VPS13A-209ENST00000467124 BVESQ8NE79 360 aa5.79□□□□□ -1.48
VPS13A-209ENST00000467124 KISS1RQ969F8 398 aaPredicted RBP5.79□□□□□ -1.48
VPS13A-209ENST00000467124 METTL22Q9BUU2 404 aaPredicted RBP5.79□□□□□ -1.48
VPS13A-209ENST00000467124 PRDM14Q9GZV8 571 aa5.79□□□□□ -1.48
VPS13A-209ENST00000467124 NCOA5Q9HCD5 579 aaKnown RBP5.79□□□□□ -1.48
VPS13A-209ENST00000467124 PRDM5Q9NQX1 630 aaPredicted RBP5.79□□□□□ -1.48
VPS13A-209ENST00000467124 WHRNQ9P202 907 aa5.79□□□□□ -1.48
VPS13A-209ENST00000467124 KCNJ6P48051 423 aa5.78□□□□□ -1.48
VPS13A-209ENST00000467124 PRSS53Q2L4Q9 553 aa5.78□□□□□ -1.48
VPS13A-209ENST00000467124 NBPF9Q3BBW0 867 aa5.78□□□□□ -1.48
VPS13A-209ENST00000467124 TAF7LQ5H9L4 462 aa5.78□□□□□ -1.48
VPS13A-209ENST00000467124 PRR23CQ6ZRP0 262 aa5.78□□□□□ -1.48
VPS13A-209ENST00000467124 PIWIL2Q8TC59 973 aaKnown RBP5.78□□□□□ -1.48
VPS13A-209ENST00000467124 NINJ1Q92982 152 aa5.78□□□□□ -1.48
VPS13A-209ENST00000467124 OSBP2Q969R2 916 aa5.78□□□□□ -1.48
VPS13A-209ENST00000467124 VWCEQ96DN2 955 aa5.78□□□□□ -1.48
VPS13A-209ENST00000467124 MFSD3Q96ES6 412 aa5.78□□□□□ -1.48
VPS13A-209ENST00000467124 C7orf69Q9H7B7 122 aa5.78□□□□□ -1.48
VPS13A-209ENST00000467124 MKNK2Q9HBH9 465 aa5.78□□□□□ -1.48
VPS13A-209ENST00000467124 STOML1Q9UBI4 398 aa5.78□□□□□ -1.48
VPS13A-209ENST00000467124 CGGBP1Q9UFW8 167 aaPredicted RBP5.78□□□□□ -1.48
VPS13A-209ENST00000467124 NDOR1Q9UHB4 597 aa5.78□□□□□ -1.48
VPS13A-209ENST00000467124 GPR55Q9Y2T6 319 aaPredicted RBP5.78□□□□□ -1.48
VPS13A-209ENST00000467124 PCDHB12Q9Y5F1 795 aa5.78□□□□□ -1.48
VPS13A-209ENST00000467124 A0A087WZG4 1122 aa5.77□□□□□ -1.49
VPS13A-209ENST00000467124 EOMESO95936 686 aa5.77□□□□□ -1.49
VPS13A-209ENST00000467124 H2AFB1P0C5Y9 115 aa5.77□□□□□ -1.49
VPS13A-209ENST00000467124 H2AFB2P0C5Z0 115 aa5.77□□□□□ -1.49
VPS13A-209ENST00000467124 FAM87AP0C7U9 286 aa5.77□□□□□ -1.49
VPS13A-209ENST00000467124 ZNF865P0CJ78 1059 aaPredicted RBP5.77□□□□□ -1.49
VPS13A-209ENST00000467124 ECI1P42126 302 aa5.77□□□□□ -1.49
VPS13A-209ENST00000467124 RASSF7Q02833 373 aa5.77□□□□□ -1.49
VPS13A-209ENST00000467124 FAM50AQ14320 339 aaKnown RBP5.77□□□□□ -1.49
VPS13A-209ENST00000467124 TM4SF20Q53R12 229 aa5.77□□□□□ -1.49
VPS13A-209ENST00000467124 SFRP5Q5T4F7 317 aa5.77□□□□□ -1.49
VPS13A-209ENST00000467124 RNF43Q68DV7 783 aa5.77□□□□□ -1.49
VPS13A-209ENST00000467124 OGFOD3Q6PK18 319 aa5.77□□□□□ -1.49
VPS13A-209ENST00000467124 SHISA5Q8N114 240 aa5.77□□□□□ -1.49
VPS13A-209ENST00000467124 SYNPOQ8N3V7 929 aa5.77□□□□□ -1.49
VPS13A-209ENST00000467124 FIBCD1Q8N539 461 aa5.77□□□□□ -1.49
VPS13A-209ENST00000467124 GATA6Q92908 595 aa5.77□□□□□ -1.49
VPS13A-209ENST00000467124 TP53INP1Q96A56 240 aa5.77□□□□□ -1.49
VPS13A-209ENST00000467124 MRGPRX3Q96LB0 322 aa5.77□□□□□ -1.49
VPS13A-209ENST00000467124 DBNDD2Q9BQY9 259 aa5.77□□□□□ -1.49
VPS13A-209ENST00000467124 DSCC1Q9BVC3 393 aa5.77□□□□□ -1.49
VPS13A-209ENST00000467124 KCNH3Q9ULD8 1083 aa5.77□□□□□ -1.49
VPS13A-209ENST00000467124 EMC9Q9Y3B6 208 aa5.77□□□□□ -1.49
VPS13A-209ENST00000467124 PRR33A8MZF0 331 aa5.76□□□□□ -1.49
VPS13A-209ENST00000467124 H0Y8X5 98 aa5.76□□□□□ -1.49
VPS13A-209ENST00000467124 MARCH6O60337 910 aa5.76□□□□□ -1.49
VPS13A-209ENST00000467124 DLX3O60479 287 aa5.76□□□□□ -1.49
VPS13A-209ENST00000467124 PDE8AO60658 829 aa5.76□□□□□ -1.49
VPS13A-209ENST00000467124 SNRPB2P08579 225 aaKnown RBP5.76□□□□□ -1.49
VPS13A-209ENST00000467124 CDKN1CP49918 316 aaPredicted RBP5.76□□□□□ -1.49
VPS13A-209ENST00000467124 CT47A1Q5JQC4 288 aaPredicted RBP5.76□□□□□ -1.49
VPS13A-209ENST00000467124 GTF2IRD2BQ6EKJ0 949 aa5.76□□□□□ -1.49
VPS13A-209ENST00000467124 POMZP3Q6PJE2 187 aa5.76□□□□□ -1.49
VPS13A-209ENST00000467124 GTF2IRD2Q86UP8 949 aa5.76□□□□□ -1.49
VPS13A-209ENST00000467124 THNSL2Q86YJ6 484 aa5.76□□□□□ -1.49
VPS13A-209ENST00000467124 TRIM59Q8IWR1 403 aa5.76□□□□□ -1.49
VPS13A-209ENST00000467124 SCUBE1Q8IWY4 988 aa5.76□□□□□ -1.49
VPS13A-209ENST00000467124 SLC7A14Q8TBB6 771 aa5.76□□□□□ -1.49
VPS13A-209ENST00000467124 STAG1Q8WVM7 1258 aa5.76□□□□□ -1.49
VPS13A-209ENST00000467124 TBC1D32Q96NH3 1257 aa5.76□□□□□ -1.49
VPS13A-209ENST00000467124 TARS2Q9BW92 718 aaKnown RBP5.76□□□□□ -1.49
VPS13A-209ENST00000467124 G3BP2Q9UN86 482 aaKnown RBP5.76□□□□□ -1.49
VPS13A-209ENST00000467124 PLAAQ9Y263 795 aa5.76□□□□□ -1.49
VPS13A-209ENST00000467124 A0A087X0B3 334 aa5.75□□□□□ -1.49
VPS13A-209ENST00000467124 CCDC163A0A0D9SF12 145 aa5.75□□□□□ -1.49
VPS13A-209ENST00000467124 PLD2O14939 933 aa5.75□□□□□ -1.49
VPS13A-209ENST00000467124 SUMO1P63165 101 aaKnown RBP5.75□□□□□ -1.49
VPS13A-209ENST00000467124 NFIAQ12857 509 aa5.75□□□□□ -1.49
VPS13A-209ENST00000467124 FGD2Q7Z6J4 655 aa5.75□□□□□ -1.49
VPS13A-209ENST00000467124 ARHGEF39Q8N4T4 335 aa5.75□□□□□ -1.49
VPS13A-209ENST00000467124 CHAC2Q8WUX2 184 aa5.75□□□□□ -1.49
VPS13A-209ENST00000467124 RCC1LQ96I51 464 aaKnown RBP5.75□□□□□ -1.49
VPS13A-209ENST00000467124 DDX56Q9NY93 547 aaKnown RBP5.75□□□□□ -1.49
VPS13A-209ENST00000467124 SFMBT1Q9UHJ3 866 aa5.75□□□□□ -1.49
VPS13A-209ENST00000467124 TRAF6Q9Y4K3 522 aa5.75□□□□□ -1.49
VPS13A-209ENST00000467124 FHOD1Q9Y613 1164 aa5.75□□□□□ -1.49
VPS13A-209ENST00000467124 SHISA3A0PJX4 238 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 HMX2A2RU54 273 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 GNAT3A8MTJ3 354 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 STXBP3O00186 592 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 DNAJC8O75937 253 aaPredicted RBP5.74□□□□□ -1.49
VPS13A-209ENST00000467124 PRAMEF1O95521 474 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 FGFR1P11362 822 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 POU3F3P20264 500 aaPredicted RBP5.74□□□□□ -1.49
VPS13A-209ENST00000467124 ADMP35318 185 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 GSK3AP49840 483 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 GRB10Q13322 594 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 ZNF460Q14592 562 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 NTRK3Q16288 839 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 PLEKHG6Q3KR16 790 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 PLA2G4EQ3MJ16 856 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 CRTC3Q6UUV7 619 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 USP53Q70EK8 1073 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 BRAPQ7Z569 592 aa5.74□□□□□ -1.49
VPS13A-209ENST00000467124 MFSD4AQ8N468 514 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms