RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 CST5P28325 142 aaPredicted RBP10.75□□□□□ -0.69
PTPDC1-203ENST00000467049 FAAP100Q0VG06 881 aa10.75□□□□□ -0.69
PTPDC1-203ENST00000467049 FAM83BQ5T0W9 1011 aa10.75□□□□□ -0.69
PTPDC1-203ENST00000467049 MROH7Q68CQ1 1323 aa10.75□□□□□ -0.69
PTPDC1-203ENST00000467049 ZSCAN25Q6NSZ9 544 aa10.75□□□□□ -0.69
PTPDC1-203ENST00000467049 GBF1Q92538 1859 aa10.75□□□□□ -0.69
PTPDC1-203ENST00000467049 SLF1Q9BQI6 1058 aa10.75□□□□□ -0.69
PTPDC1-203ENST00000467049 TEX13BQ9BXU2 312 aa10.75□□□□□ -0.69
PTPDC1-203ENST00000467049 BOLA2Q9H3K6 86 aa10.75□□□□□ -0.69
PTPDC1-203ENST00000467049 PRDM6Q9NQX0 595 aa10.75□□□□□ -0.69
PTPDC1-203ENST00000467049 STARD7Q9NQZ5 370 aa10.75□□□□□ -0.69
PTPDC1-203ENST00000467049 ARPP21Q9UBL0 812 aaPredicted RBP10.75□□□□□ -0.69
PTPDC1-203ENST00000467049 TBX21Q9UL17 535 aa10.75□□□□□ -0.69
PTPDC1-203ENST00000467049 SYNRGQ9UMZ2 1314 aa10.75□□□□□ -0.69
PTPDC1-203ENST00000467049 LRRC37A2A6NM11 1700 aa10.75□□□□□ -0.69
PTPDC1-203ENST00000467049 ELP1O95163 1332 aa10.74□□□□□ -0.69
PTPDC1-203ENST00000467049 SMIM22K7EJ46 135 aa10.74□□□□□ -0.69
PTPDC1-203ENST00000467049 ATP2A1O14983 1001 aa10.74□□□□□ -0.69
PTPDC1-203ENST00000467049 DUSP11O75319 330 aaKnown RBP10.74□□□□□ -0.69
PTPDC1-203ENST00000467049 TIMP1P01033 207 aa10.74□□□□□ -0.69
PTPDC1-203ENST00000467049 CCSAPQ6IQ19 270 aaPredicted RBP10.74□□□□□ -0.69
PTPDC1-203ENST00000467049 CTR9Q6PD62 1173 aa10.74□□□□□ -0.69
PTPDC1-203ENST00000467049 CCDC174Q6PII3 467 aa10.74□□□□□ -0.69
PTPDC1-203ENST00000467049 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.74□□□□□ -0.69
PTPDC1-203ENST00000467049 NYAP2Q9P242 653 aa10.74□□□□□ -0.69
PTPDC1-203ENST00000467049 SLC4A4Q9Y6R1 1079 aa10.74□□□□□ -0.69
PTPDC1-203ENST00000467049 DNAH12Q6ZR08 3092 aa10.74□□□□□ -0.69
PTPDC1-203ENST00000467049 SNAI1O95863 264 aaPredicted RBP10.74□□□□□ -0.69
PTPDC1-203ENST00000467049 DNAJB2P25686 324 aa10.74□□□□□ -0.69
PTPDC1-203ENST00000467049 PPIGQ13427 754 aaKnown RBP eCLIP10.74□□□□□ -0.69
PTPDC1-203ENST00000467049 SLFNL1Q499Z3 407 aa10.74□□□□□ -0.69
PTPDC1-203ENST00000467049 SBK1Q52WX2 424 aa10.74□□□□□ -0.69
PTPDC1-203ENST00000467049 LENG1Q96BZ8 264 aaPredicted RBP10.74□□□□□ -0.69
PTPDC1-203ENST00000467049 UPF3AQ9H1J1 476 aaKnown RBP10.74□□□□□ -0.69
PTPDC1-203ENST00000467049 APBB1O00213 710 aa10.73□□□□□ -0.69
PTPDC1-203ENST00000467049 CDK7P50613 346 aa10.73□□□□□ -0.69
PTPDC1-203ENST00000467049 HNRNPUQ00839 825 aaKnown RBP eCLIP10.73□□□□□ -0.69
PTPDC1-203ENST00000467049 GRIN2CQ14957 1233 aa10.73□□□□□ -0.69
PTPDC1-203ENST00000467049 KCNA10Q16322 511 aa10.73□□□□□ -0.69
PTPDC1-203ENST00000467049 SNRNP48Q6IEG0 339 aaKnown RBP10.73□□□□□ -0.69
PTPDC1-203ENST00000467049 MFSD5Q6N075 450 aa10.73□□□□□ -0.69
PTPDC1-203ENST00000467049 GIMAP6Q6P9H5 292 aa10.73□□□□□ -0.69
PTPDC1-203ENST00000467049 SIRT2Q8IXJ6 389 aa10.73□□□□□ -0.69
PTPDC1-203ENST00000467049 PCSK9Q8NBP7 692 aaKnown RBP10.73□□□□□ -0.69
PTPDC1-203ENST00000467049 TIFAQ96CG3 184 aa10.73□□□□□ -0.69
PTPDC1-203ENST00000467049 DDX11Q96FC9 970 aa10.73□□□□□ -0.69
PTPDC1-203ENST00000467049 ZHX1Q9UKY1 873 aaPredicted RBP10.73□□□□□ -0.69
PTPDC1-203ENST00000467049 DDX19BQ9UMR2 479 aa10.73□□□□□ -0.69
PTPDC1-203ENST00000467049 SYNPO2Q9UMS6 1093 aa10.73□□□□□ -0.69
PTPDC1-203ENST00000467049 NDUFB10O96000 172 aa10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 GJA9P57773 515 aa10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 NKX3-2P78367 333 aa10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 TJAP1Q5JTD0 557 aa10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 RASIP1Q5U651 963 aa10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 PRPF38AQ8NAV1 312 aaKnown RBP10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 GLT1D1Q96MS3 346 aa10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 ZNF576Q9H609 170 aa10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 SPC25Q9HBM1 224 aa10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 ZBTB40Q9NUA8 1239 aa10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 DAXXQ9UER7 740 aaPredicted RBP10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 MYO9BQ13459 2157 aa10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 IGKV6D-41A0A0C4DH26 115 aa10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 A0A0U1RQG5 324 aaPredicted RBP10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 MYADML2A6NDP7 307 aa10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 RAD21O60216 631 aa10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 ZBED4O75132 1171 aa10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 RASA1P20936 1047 aa10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 OAZ1P54368 228 aa10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 ACVR2BQ13705 512 aa10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 USP38Q8NB14 1042 aa10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 NUP88Q99567 741 aaPredicted RBP10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 PUS7LQ9H0K6 701 aaKnown RBP10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 ABHD16BQ9H3Z7 469 aa10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 CHMP4BQ9H444 224 aaKnown RBP10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 FBXO40Q9UH90 709 aa10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 RIPK3Q9Y572 518 aa10.72□□□□□ -0.69
PTPDC1-203ENST00000467049 F5H6K3 240 aa10.71□□□□□ -0.69
PTPDC1-203ENST00000467049 ARVCFO00192 962 aa10.71□□□□□ -0.69
PTPDC1-203ENST00000467049 TLR3O15455 904 aaKnown RBP10.71□□□□□ -0.69
PTPDC1-203ENST00000467049 KLRC3Q07444 240 aa10.71□□□□□ -0.69
PTPDC1-203ENST00000467049 TMEM240Q5SV17 173 aa10.71□□□□□ -0.69
PTPDC1-203ENST00000467049 AKNAD1Q5T1N1 836 aa10.71□□□□□ -0.69
PTPDC1-203ENST00000467049 PSRC1Q6PGN9 363 aaPredicted RBP10.71□□□□□ -0.69
PTPDC1-203ENST00000467049 CHST13Q8NET6 341 aa10.71□□□□□ -0.69
PTPDC1-203ENST00000467049 FGD4Q96M96 766 aa10.71□□□□□ -0.69
PTPDC1-203ENST00000467049 STRBPQ96SI9 672 aaKnown RBP10.71□□□□□ -0.69
PTPDC1-203ENST00000467049 SLC38A10Q9HBR0 1119 aa10.71□□□□□ -0.69
PTPDC1-203ENST00000467049 FEM1BQ9UK73 627 aa10.71□□□□□ -0.69
PTPDC1-203ENST00000467049 CTDP1Q9Y5B0 961 aaPredicted RBP10.71□□□□□ -0.69
PTPDC1-203ENST00000467049 CHGBP05060 677 aa10.7□□□□□ -0.7
PTPDC1-203ENST00000467049 C6orf222P0C671 652 aaPredicted RBP10.7□□□□□ -0.7
PTPDC1-203ENST00000467049 FDX1P10109 184 aa10.7□□□□□ -0.7
PTPDC1-203ENST00000467049 FAM126BQ8IXS8 530 aa10.7□□□□□ -0.7
PTPDC1-203ENST00000467049 TMEM199Q8N511 208 aa10.7□□□□□ -0.7
PTPDC1-203ENST00000467049 MKL1Q969V6 931 aa10.7□□□□□ -0.7
PTPDC1-203ENST00000467049 GAS2L1Q99501 681 aaPredicted RBP10.7□□□□□ -0.7
PTPDC1-203ENST00000467049 MKNK2Q9HBH9 465 aa10.7□□□□□ -0.7
PTPDC1-203ENST00000467049 LCTP09848 1927 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms