RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.9□□□□□ -1.31
CXXC4-202ENST00000466963 SMIM22K7EJ46 135 aa6.9□□□□□ -1.31
CXXC4-202ENST00000466963 USP5P45974 858 aa6.9□□□□□ -1.31
CXXC4-202ENST00000466963 NAALADL2Q58DX5 795 aa6.9□□□□□ -1.31
CXXC4-202ENST00000466963 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.9□□□□□ -1.31
CXXC4-202ENST00000466963 FLRT1Q9NZU1 646 aa6.9□□□□□ -1.31
CXXC4-202ENST00000466963 BTBD7Q9P203 1132 aa6.9□□□□□ -1.31
CXXC4-202ENST00000466963 IQSEC3Q9UPP2 1182 aaPredicted RBP6.9□□□□□ -1.31
CXXC4-202ENST00000466963 ABHD14A-ACY1A0A1B0GW23 586 aa6.89□□□□□ -1.31
CXXC4-202ENST00000466963 USP17L12C9JPN9 530 aa6.89□□□□□ -1.31
CXXC4-202ENST00000466963 USP17L21D6R901 530 aa6.89□□□□□ -1.31
CXXC4-202ENST00000466963 GH2P01242 217 aa6.89□□□□□ -1.31
CXXC4-202ENST00000466963 GNAI2P04899 355 aa6.89□□□□□ -1.31
CXXC4-202ENST00000466963 STAT3P40763 770 aa6.89□□□□□ -1.31
CXXC4-202ENST00000466963 PPP2R2DQ66LE6 453 aa6.89□□□□□ -1.31
CXXC4-202ENST00000466963 AFAP1L1Q8TED9 768 aa6.89□□□□□ -1.31
CXXC4-202ENST00000466963 RSPH1Q8WYR4 309 aa6.89□□□□□ -1.31
CXXC4-202ENST00000466963 SYNRGQ9UMZ2 1314 aa6.89□□□□□ -1.31
CXXC4-202ENST00000466963 RALGAPA2Q2PPJ7 1873 aa6.89□□□□□ -1.31
CXXC4-202ENST00000466963 RBM47A0AV96 593 aaKnown RBP6.89□□□□□ -1.31
CXXC4-202ENST00000466963 CPT1AP50416 773 aa6.89□□□□□ -1.31
CXXC4-202ENST00000466963 CNGB1Q14028 1251 aaPredicted RBP6.89□□□□□ -1.31
CXXC4-202ENST00000466963 CSPP1Q1MSJ5 1256 aa6.89□□□□□ -1.31
CXXC4-202ENST00000466963 RETREG2Q8NC44 543 aa6.89□□□□□ -1.31
CXXC4-202ENST00000466963 SH3RF3Q8TEJ3 882 aaPredicted RBP6.89□□□□□ -1.31
CXXC4-202ENST00000466963 DAXXQ9UER7 740 aaPredicted RBP6.89□□□□□ -1.31
CXXC4-202ENST00000466963 MTCH2Q9Y6C9 303 aa6.89□□□□□ -1.31
CXXC4-202ENST00000466963 EMSYQ7Z589 1322 aa6.89□□□□□ -1.31
CXXC4-202ENST00000466963 PLIN4Q96Q06 1357 aa6.89□□□□□ -1.31
CXXC4-202ENST00000466963 ZNFX1Q9P2E3 1918 aaKnown RBP6.89□□□□□ -1.31
CXXC4-202ENST00000466963 C19orf67A6NJJ6 358 aa6.88□□□□□ -1.31
CXXC4-202ENST00000466963 PROB1E7EW31 1015 aa6.88□□□□□ -1.31
CXXC4-202ENST00000466963 CYP2C19P33261 490 aa6.88□□□□□ -1.31
CXXC4-202ENST00000466963 PRPF38AQ8NAV1 312 aaKnown RBP6.88□□□□□ -1.31
CXXC4-202ENST00000466963 SEMA4AQ9H3S1 761 aa6.88□□□□□ -1.31
CXXC4-202ENST00000466963 ADD3Q9UEY8 706 aaKnown RBP6.88□□□□□ -1.31
CXXC4-202ENST00000466963 CTDP1Q9Y5B0 961 aaPredicted RBP6.88□□□□□ -1.31
CXXC4-202ENST00000466963 COBLO75128 1261 aa6.88□□□□□ -1.31
CXXC4-202ENST00000466963 RB1P06400 928 aa6.88□□□□□ -1.31
CXXC4-202ENST00000466963 ACVR2BQ13705 512 aa6.88□□□□□ -1.31
CXXC4-202ENST00000466963 SBK1Q52WX2 424 aa6.88□□□□□ -1.31
CXXC4-202ENST00000466963 MCTP2Q6DN12 878 aa6.88□□□□□ -1.31
CXXC4-202ENST00000466963 TEX2Q8IWB9 1127 aa6.88□□□□□ -1.31
CXXC4-202ENST00000466963 PPP2R3CQ969Q6 453 aa6.88□□□□□ -1.31
CXXC4-202ENST00000466963 MKL1Q969V6 931 aa6.88□□□□□ -1.31
CXXC4-202ENST00000466963 NOC4LQ9BVI4 516 aaKnown RBP6.88□□□□□ -1.31
CXXC4-202ENST00000466963 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.88□□□□□ -1.31
CXXC4-202ENST00000466963 DNAJC18Q9H819 358 aa6.88□□□□□ -1.31
CXXC4-202ENST00000466963 POTEB3A0JP26 581 aa6.87□□□□□ -1.31
CXXC4-202ENST00000466963 ATP2A2P16615 1042 aaKnown RBP6.87□□□□□ -1.31
CXXC4-202ENST00000466963 ATN1P54259 1190 aaPredicted RBP6.87□□□□□ -1.31
CXXC4-202ENST00000466963 ERVK-21P61565 698 aa6.87□□□□□ -1.31
CXXC4-202ENST00000466963 TRAF1Q13077 416 aa6.87□□□□□ -1.31
CXXC4-202ENST00000466963 POTEBQ6S5H4 581 aa6.87□□□□□ -1.31
CXXC4-202ENST00000466963 GMCL1P1Q8NEA9 526 aa6.87□□□□□ -1.31
CXXC4-202ENST00000466963 TGFBRAP1Q8WUH2 860 aa6.87□□□□□ -1.31
CXXC4-202ENST00000466963 HIPK3Q9H422 1215 aa6.87□□□□□ -1.31
CXXC4-202ENST00000466963 DCXO43602 365 aa6.87□□□□□ -1.31
CXXC4-202ENST00000466963 SHMT1P34896 483 aa6.87□□□□□ -1.31
CXXC4-202ENST00000466963 NCAPG2Q86XI2 1143 aa6.87□□□□□ -1.31
CXXC4-202ENST00000466963 TRMT2AQ8IZ69 625 aaKnown RBP6.87□□□□□ -1.31
CXXC4-202ENST00000466963 RGS22Q8NE09 1264 aa6.87□□□□□ -1.31
CXXC4-202ENST00000466963 CHURC1Q8WUH1 139 aa6.87□□□□□ -1.31
CXXC4-202ENST00000466963 SLF1Q9BQI6 1058 aa6.87□□□□□ -1.31
CXXC4-202ENST00000466963 ARPP21Q9UBL0 812 aaPredicted RBP6.87□□□□□ -1.31
CXXC4-202ENST00000466963 CYP2E1P05181 493 aaPredicted RBP6.87□□□□□ -1.31
CXXC4-202ENST00000466963 POLR3DP05423 398 aaPredicted RBP6.87□□□□□ -1.31
CXXC4-202ENST00000466963 GNAT2P19087 354 aa6.87□□□□□ -1.31
CXXC4-202ENST00000466963 SDHBP21912 280 aa6.87□□□□□ -1.31
CXXC4-202ENST00000466963 KCNA10Q16322 511 aa6.87□□□□□ -1.31
CXXC4-202ENST00000466963 FAM47AQ5JRC9 791 aa6.87□□□□□ -1.31
CXXC4-202ENST00000466963 ZBED9Q6R2W3 1325 aa6.87□□□□□ -1.31
CXXC4-202ENST00000466963 ZNF365Q70YC5 407 aa6.87□□□□□ -1.31
CXXC4-202ENST00000466963 REPS2Q8NFH8 660 aa6.87□□□□□ -1.31
CXXC4-202ENST00000466963 MTG1Q9BT17 334 aaPredicted RBP6.87□□□□□ -1.31
CXXC4-202ENST00000466963 VWA5AO00534 786 aa6.86□□□□□ -1.31
CXXC4-202ENST00000466963 PQBP1O60828 265 aaKnown RBP6.86□□□□□ -1.31
CXXC4-202ENST00000466963 CYP7A1P22680 504 aa6.86□□□□□ -1.31
CXXC4-202ENST00000466963 WDR78Q5VTH9 848 aa6.86□□□□□ -1.31
CXXC4-202ENST00000466963 CNKSR3Q6P9H4 555 aa6.86□□□□□ -1.31
CXXC4-202ENST00000466963 KATNAL1Q9BW62 490 aa6.86□□□□□ -1.31
CXXC4-202ENST00000466963 NKX2-4Q9H2Z4 354 aa6.86□□□□□ -1.31
CXXC4-202ENST00000466963 SIP14410 1827 aa6.86□□□□□ -1.31
CXXC4-202ENST00000466963 ZNF536O15090 1300 aa6.86□□□□□ -1.31
CXXC4-202ENST00000466963 FLOT1O75955 427 aa6.86□□□□□ -1.31
CXXC4-202ENST00000466963 KCNJ6P48051 423 aa6.86□□□□□ -1.31
CXXC4-202ENST00000466963 MRE11P49959 708 aa6.86□□□□□ -1.31
CXXC4-202ENST00000466963 ICA1Q05084 483 aa6.86□□□□□ -1.31
CXXC4-202ENST00000466963 TNNI3KQ59H18 835 aa6.86□□□□□ -1.31
CXXC4-202ENST00000466963 HERC4Q5GLZ8 1057 aaPredicted RBP6.86□□□□□ -1.31
CXXC4-202ENST00000466963 PDE12Q6L8Q7 609 aaKnown RBP6.86□□□□□ -1.31
CXXC4-202ENST00000466963 C16orf86Q6ZW13 317 aa6.86□□□□□ -1.31
CXXC4-202ENST00000466963 USP38Q8NB14 1042 aa6.86□□□□□ -1.31
CXXC4-202ENST00000466963 SSH3Q8TE77 659 aa6.86□□□□□ -1.31
CXXC4-202ENST00000466963 APBB2Q92870 758 aa6.86□□□□□ -1.31
CXXC4-202ENST00000466963 DDX11Q96FC9 970 aa6.86□□□□□ -1.31
CXXC4-202ENST00000466963 TGS1Q96RS0 853 aaKnown RBP6.86□□□□□ -1.31
CXXC4-202ENST00000466963 PRDM12Q9H4Q4 367 aa6.86□□□□□ -1.31
CXXC4-202ENST00000466963 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.86□□□□□ -1.31
CXXC4-202ENST00000466963 MAP3K20Q9NYL2 800 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms