RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 DSG3P32926 999 aa17.68■□□□□ 0.42
NPHP4-205ENST00000466897 STAG2Q8N3U4 1231 aa17.68■□□□□ 0.42
NPHP4-205ENST00000466897 SNX21Q969T3 373 aa17.68■□□□□ 0.42
NPHP4-205ENST00000466897 CHMP4CQ96CF2 233 aa17.68■□□□□ 0.42
NPHP4-205ENST00000466897 SPZ1Q9BXG8 430 aa17.68■□□□□ 0.42
NPHP4-205ENST00000466897 FAM217BQ9NTX9 383 aaPredicted RBP17.68■□□□□ 0.42
NPHP4-205ENST00000466897 RBBP6Q7Z6E9 1792 aaKnown RBP17.67■□□□□ 0.42
NPHP4-205ENST00000466897 SPDYE16A6NNV3 312 aaPredicted RBP17.67■□□□□ 0.42
NPHP4-205ENST00000466897 RXRAP19793 462 aa17.67■□□□□ 0.42
NPHP4-205ENST00000466897 HERVK_113P62684 666 aa17.67■□□□□ 0.42
NPHP4-205ENST00000466897 ME3Q16798 604 aa17.67■□□□□ 0.42
NPHP4-205ENST00000466897 TMTC3Q6ZXV5 915 aa17.67■□□□□ 0.42
NPHP4-205ENST00000466897 MB21D1Q8N884 522 aa17.67■□□□□ 0.42
NPHP4-205ENST00000466897 SLKQ9H2G2 1235 aaPredicted RBP17.67■□□□□ 0.42
NPHP4-205ENST00000466897 RIOX1Q9H6W3 641 aa17.67■□□□□ 0.42
NPHP4-205ENST00000466897 GPCPD1Q9NPB8 672 aa17.67■□□□□ 0.42
NPHP4-205ENST00000466897 ADGRA2Q96PE1 1338 aa17.67■□□□□ 0.42
NPHP4-205ENST00000466897 BAZ2BQ9UIF8 2168 aaKnown RBP17.66■□□□□ 0.42
NPHP4-205ENST00000466897 CA12O43570 354 aa17.66■□□□□ 0.42
NPHP4-205ENST00000466897 DHX16O60231 1041 aaKnown RBP17.66■□□□□ 0.42
NPHP4-205ENST00000466897 CD2BP2O95400 341 aaKnown RBP17.66■□□□□ 0.42
NPHP4-205ENST00000466897 GOLGA8HP0CJ92 632 aa17.66■□□□□ 0.42
NPHP4-205ENST00000466897 GCLCP48506 637 aaPredicted RBP17.66■□□□□ 0.42
NPHP4-205ENST00000466897 MAP2K1Q02750 393 aaPredicted RBP17.66■□□□□ 0.42
NPHP4-205ENST00000466897 SYDE2Q5VT97 1194 aa17.66■□□□□ 0.42
NPHP4-205ENST00000466897 TTBK2Q6IQ55 1244 aa17.66■□□□□ 0.42
NPHP4-205ENST00000466897 GTF3C6Q969F1 213 aa17.66■□□□□ 0.42
NPHP4-205ENST00000466897 MTMR8Q96EF0 704 aa17.66■□□□□ 0.42
NPHP4-205ENST00000466897 LARP6Q9BRS8 491 aaKnown RBP17.66■□□□□ 0.42
NPHP4-205ENST00000466897 FBXO28Q9NVF7 368 aa17.66■□□□□ 0.42
NPHP4-205ENST00000466897 SAGE1Q9NXZ1 904 aa17.66■□□□□ 0.42
NPHP4-205ENST00000466897 PRR12Q9ULL5 1215 aa17.66■□□□□ 0.42
NPHP4-205ENST00000466897 NAP1L2Q9ULW6 460 aaPredicted RBP17.66■□□□□ 0.42
NPHP4-205ENST00000466897 MGAMO43451 1857 aa17.66■□□□□ 0.42
NPHP4-205ENST00000466897 LARGE1O95461 756 aa17.65■□□□□ 0.42
NPHP4-205ENST00000466897 CDC27P30260 824 aa17.65■□□□□ 0.42
NPHP4-205ENST00000466897 SCRN1Q12765 414 aa17.65■□□□□ 0.42
NPHP4-205ENST00000466897 IKQ13123 557 aaPredicted RBP17.65■□□□□ 0.42
NPHP4-205ENST00000466897 TAF1CQ15572 869 aaPredicted RBP17.65■□□□□ 0.42
NPHP4-205ENST00000466897 CCDC144CPQ8IYA2 1237 aa17.65■□□□□ 0.42
NPHP4-205ENST00000466897 P2RX7Q99572 595 aaKnown RBP17.65■□□□□ 0.42
NPHP4-205ENST00000466897 RANBP17Q9H2T7 1088 aaKnown RBP17.65■□□□□ 0.42
NPHP4-205ENST00000466897 SLC38A10Q9HBR0 1119 aa17.65■□□□□ 0.42
NPHP4-205ENST00000466897 ZFYVE28Q9HCC9 887 aa17.65■□□□□ 0.42
NPHP4-205ENST00000466897 PNMA2Q9UL42 364 aa17.65■□□□□ 0.42
NPHP4-205ENST00000466897 ISY1Q9ULR0 285 aaKnown RBP17.65■□□□□ 0.42
NPHP4-205ENST00000466897 VWA5AO00534 786 aa17.64■□□□□ 0.41
NPHP4-205ENST00000466897 ATP2A1O14983 1001 aa17.64■□□□□ 0.41
NPHP4-205ENST00000466897 CYTH3O43739 400 aa17.64■□□□□ 0.41
NPHP4-205ENST00000466897 TLR2O60603 784 aa17.64■□□□□ 0.41
NPHP4-205ENST00000466897 PLEKHA8P1O95397 391 aa17.64■□□□□ 0.41
NPHP4-205ENST00000466897 IFNAR1P17181 557 aa17.64■□□□□ 0.41
NPHP4-205ENST00000466897 OAZ1P54368 228 aa17.64■□□□□ 0.41
NPHP4-205ENST00000466897 FUT2Q10981 343 aa17.64■□□□□ 0.41
NPHP4-205ENST00000466897 NTRK3Q16288 839 aa17.64■□□□□ 0.41
NPHP4-205ENST00000466897 CPLX2Q6PUV4 134 aaKnown RBP17.64■□□□□ 0.41
NPHP4-205ENST00000466897 RAB11FIP4Q86YS3 637 aa17.64■□□□□ 0.41
NPHP4-205ENST00000466897 ADGRF4Q8IZF3 695 aa17.64■□□□□ 0.41
NPHP4-205ENST00000466897 SRBD1Q8N5C6 995 aaKnown RBP17.64■□□□□ 0.41
NPHP4-205ENST00000466897 REPS2Q8NFH8 660 aa17.64■□□□□ 0.41
NPHP4-205ENST00000466897 SMCR8Q8TEV9 937 aaPredicted RBP17.64■□□□□ 0.41
NPHP4-205ENST00000466897 KIFC2Q96AC6 838 aa17.64■□□□□ 0.41
NPHP4-205ENST00000466897 ATG4CQ96DT6 458 aa17.64■□□□□ 0.41
NPHP4-205ENST00000466897 RBM27Q9P2N5 1060 aaKnown RBP17.64■□□□□ 0.41
NPHP4-205ENST00000466897 RABGAP1Q9Y3P9 1069 aa17.64■□□□□ 0.41
NPHP4-205ENST00000466897 CNTNAP5Q8WYK1 1306 aa17.64■□□□□ 0.41
NPHP4-205ENST00000466897 CDKL5O76039 1030 aa17.63■□□□□ 0.41
NPHP4-205ENST00000466897 CYP2C8P10632 490 aa17.63■□□□□ 0.41
NPHP4-205ENST00000466897 ADD1P35611 737 aaKnown RBP17.63■□□□□ 0.41
NPHP4-205ENST00000466897 SLC16A2P36021 539 aa17.63■□□□□ 0.41
NPHP4-205ENST00000466897 CCT2P78371 535 aaKnown RBP17.63■□□□□ 0.41
NPHP4-205ENST00000466897 SLC35G1Q2M3R5 365 aa17.63■□□□□ 0.41
NPHP4-205ENST00000466897 NOL8Q76FK4 1167 aaKnown RBP17.63■□□□□ 0.41
NPHP4-205ENST00000466897 NBPF11Q86T75 865 aa17.63■□□□□ 0.41
NPHP4-205ENST00000466897 TMX3Q96JJ7 454 aa17.63■□□□□ 0.41
NPHP4-205ENST00000466897 UBA5Q9GZZ9 404 aa17.63■□□□□ 0.41
NPHP4-205ENST00000466897 JMJD4Q9H9V9 463 aa17.63■□□□□ 0.41
NPHP4-205ENST00000466897 MORF4L1Q9UBU8 362 aa17.63■□□□□ 0.41
NPHP4-205ENST00000466897 SMCHD1A6NHR9 2005 aa17.62■□□□□ 0.41
NPHP4-205ENST00000466897 CPLX1O14810 134 aa17.62■□□□□ 0.41
NPHP4-205ENST00000466897 ZBED4O75132 1171 aa17.62■□□□□ 0.41
NPHP4-205ENST00000466897 STK3Q13188 491 aa17.62■□□□□ 0.41
NPHP4-205ENST00000466897 CRHR2Q13324 411 aa17.62■□□□□ 0.41
NPHP4-205ENST00000466897 FAM110CQ1W6H9 321 aa17.62■□□□□ 0.41
NPHP4-205ENST00000466897 NOM1Q5C9Z4 860 aaKnown RBP17.62■□□□□ 0.41
NPHP4-205ENST00000466897 POTEEQ6S8J3 1075 aa17.62■□□□□ 0.41
NPHP4-205ENST00000466897 LLPHQ9BRT6 129 aaKnown RBP17.62■□□□□ 0.41
NPHP4-205ENST00000466897 RNF26Q9BY78 433 aaPredicted RBP17.62■□□□□ 0.41
NPHP4-205ENST00000466897 NCOA5Q9HCD5 579 aaKnown RBP17.62■□□□□ 0.41
NPHP4-205ENST00000466897 RNF186Q9NXI6 227 aa17.62■□□□□ 0.41
NPHP4-205ENST00000466897 ZNF214Q9UL59 606 aaPredicted RBP17.62■□□□□ 0.41
NPHP4-205ENST00000466897 STK36Q9NRP7 1315 aa17.62■□□□□ 0.41
NPHP4-205ENST00000466897 K7ELQ4 463 aaPredicted RBP17.61■□□□□ 0.41
NPHP4-205ENST00000466897 ZBTB5O15062 677 aa17.61■□□□□ 0.41
NPHP4-205ENST00000466897 BCRP11274 1271 aa17.61■□□□□ 0.41
NPHP4-205ENST00000466897 ST3GAL1Q11201 340 aa17.61■□□□□ 0.41
NPHP4-205ENST00000466897 TRAF1Q13077 416 aa17.61■□□□□ 0.41
NPHP4-205ENST00000466897 CDC37Q16543 378 aaPredicted RBP17.61■□□□□ 0.41
NPHP4-205ENST00000466897 C17orf99Q6UX52 265 aa17.61■□□□□ 0.41
NPHP4-205ENST00000466897 CPVLQ9H3G5 476 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms