RNA–Protein interactions for RNA: ENST00000466694.5

NUP58-208, Transcript of nucleoporin 58, humanhuman

TSL 5

Gene NUP58, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-208ENST00000466694 PCDHA6Q9UN73 950 aa19.31■□□□□ 0.68
NUP58-208ENST00000466694 PCDHA8Q9Y5H6 950 aa19.31■□□□□ 0.68
NUP58-208ENST00000466694 COL4A5P29400 1685 aa19.3■□□□□ 0.68
NUP58-208ENST00000466694 SMC2O95347 1197 aa19.3■□□□□ 0.68
NUP58-208ENST00000466694 CRKP46108 304 aa19.3■□□□□ 0.68
NUP58-208ENST00000466694 USP17L2Q6R6M4 530 aa19.3■□□□□ 0.68
NUP58-208ENST00000466694 SH3RF1Q7Z6J0 888 aa19.3■□□□□ 0.68
NUP58-208ENST00000466694 CACTINQ8WUQ7 758 aaKnown RBP19.3■□□□□ 0.68
NUP58-208ENST00000466694 RRP36Q96EU6 259 aaKnown RBP19.3■□□□□ 0.68
NUP58-208ENST00000466694 ZDHHC15Q96MV8 337 aa19.3■□□□□ 0.68
NUP58-208ENST00000466694 PYM1Q9BRP8 204 aaKnown RBP19.3■□□□□ 0.68
NUP58-208ENST00000466694 HSD3B7Q9H2F3 369 aa19.3■□□□□ 0.68
NUP58-208ENST00000466694 IMPACTQ9P2X3 320 aa19.3■□□□□ 0.68
NUP58-208ENST00000466694 PPIP5K2O43314 1243 aa19.29■□□□□ 0.68
NUP58-208ENST00000466694 LRMPQ12912 555 aa19.29■□□□□ 0.68
NUP58-208ENST00000466694 RASGRP2Q7LDG7 609 aa19.29■□□□□ 0.68
NUP58-208ENST00000466694 GRAMD1CQ8IYS0 662 aa19.29■□□□□ 0.68
NUP58-208ENST00000466694 C4orf32Q8N8J7 132 aa19.29■□□□□ 0.68
NUP58-208ENST00000466694 XPO4Q9C0E2 1151 aaKnown RBP19.29■□□□□ 0.68
NUP58-208ENST00000466694 ZMYND12Q9H0C1 365 aa19.29■□□□□ 0.68
NUP58-208ENST00000466694 IFNKQ9P0W0 207 aa19.29■□□□□ 0.68
NUP58-208ENST00000466694 R3HCC1Q9Y3T6 440 aaKnown RBP19.29■□□□□ 0.68
NUP58-208ENST00000466694 YDJCA8MPS7 323 aa19.28■□□□□ 0.68
NUP58-208ENST00000466694 HLA-DOAP06340 250 aa19.28■□□□□ 0.68
NUP58-208ENST00000466694 AKR1B1P15121 316 aa19.28■□□□□ 0.68
NUP58-208ENST00000466694 LRRC8AQ8IWT6 810 aa19.28■□□□□ 0.68
NUP58-208ENST00000466694 RASGRP4Q8TDF6 673 aa19.28■□□□□ 0.68
NUP58-208ENST00000466694 PIM2Q9P1W9 311 aa19.28■□□□□ 0.68
NUP58-208ENST00000466694 USP17L5A8MUK1 530 aa19.28■□□□□ 0.68
NUP58-208ENST00000466694 PDHBP11177 359 aa19.28■□□□□ 0.68
NUP58-208ENST00000466694 LMOD1P29536 600 aaPredicted RBP19.28■□□□□ 0.68
NUP58-208ENST00000466694 LONP1P36776 959 aaKnown RBP19.28■□□□□ 0.68
NUP58-208ENST00000466694 GSDMDP57764 484 aa19.28■□□□□ 0.68
NUP58-208ENST00000466694 HDLBPQ00341 1268 aaKnown RBP19.28■□□□□ 0.68
NUP58-208ENST00000466694 FANCCQ00597 558 aa19.28■□□□□ 0.68
NUP58-208ENST00000466694 ASPRV1Q53RT3 343 aa19.28■□□□□ 0.68
NUP58-208ENST00000466694 PAGE5Q96GU1 130 aa19.28■□□□□ 0.68
NUP58-208ENST00000466694 EHD4Q9H223 541 aa19.28■□□□□ 0.68
NUP58-208ENST00000466694 RIOX1Q9H6W3 641 aa19.28■□□□□ 0.68
NUP58-208ENST00000466694 SEC63Q9UGP8 760 aaKnown RBP19.28■□□□□ 0.68
NUP58-208ENST00000466694 GREB1LQ9C091 1923 aaPredicted RBP19.28■□□□□ 0.68
NUP58-208ENST00000466694 TPM2P07951 284 aa19.27■□□□□ 0.68
NUP58-208ENST00000466694 SHMT1P34896 483 aa19.27■□□□□ 0.68
NUP58-208ENST00000466694 NAPAP54920 295 aa19.27■□□□□ 0.68
NUP58-208ENST00000466694 IL17AQ16552 155 aa19.27■□□□□ 0.68
NUP58-208ENST00000466694 CPVLQ9H3G5 476 aa19.27■□□□□ 0.68
NUP58-208ENST00000466694 hCG_1984214I3L0E3 225 aa19.26■□□□□ 0.67
NUP58-208ENST00000466694 TTLL1O95922 423 aa19.26■□□□□ 0.67
NUP58-208ENST00000466694 SNHG28P0DPA3 235 aa19.26■□□□□ 0.67
NUP58-208ENST00000466694 CT47A1Q5JQC4 288 aaPredicted RBP19.26■□□□□ 0.67
NUP58-208ENST00000466694 DNTTIP2Q5QJE6 756 aaKnown RBP19.26■□□□□ 0.67
NUP58-208ENST00000466694 SOGA3Q5TF21 947 aa19.26■□□□□ 0.67
NUP58-208ENST00000466694 ZNF713Q8N859 430 aaPredicted RBP19.26■□□□□ 0.67
NUP58-208ENST00000466694 IQUBQ8NA54 791 aa19.26■□□□□ 0.67
NUP58-208ENST00000466694 VPS33BQ9H267 617 aa19.26■□□□□ 0.67
NUP58-208ENST00000466694 C6orf50Q9HD87 102 aa19.26■□□□□ 0.67
NUP58-208ENST00000466694 CBFA2T2O43439 604 aa19.26■□□□□ 0.67
NUP58-208ENST00000466694 GNA11P29992 359 aa19.26■□□□□ 0.67
NUP58-208ENST00000466694 DHX8Q14562 1220 aaKnown RBP19.26■□□□□ 0.67
NUP58-208ENST00000466694 E2F4Q16254 413 aa19.26■□□□□ 0.67
NUP58-208ENST00000466694 KRT25Q7Z3Z0 450 aa19.26■□□□□ 0.67
NUP58-208ENST00000466694 FILIP1Q7Z7B0 1213 aa19.26■□□□□ 0.67
NUP58-208ENST00000466694 ESYT2A0FGR8 921 aa19.25■□□□□ 0.67
NUP58-208ENST00000466694 LAD1O00515 517 aa19.25■□□□□ 0.67
NUP58-208ENST00000466694 DPYDQ12882 1025 aa19.25■□□□□ 0.67
NUP58-208ENST00000466694 PPP4R3BQ5MIZ7 849 aa19.25■□□□□ 0.67
NUP58-208ENST00000466694 HOMER1Q86YM7 354 aa19.25■□□□□ 0.67
NUP58-208ENST00000466694 KIAA0825Q8IV33 1275 aa19.25■□□□□ 0.67
NUP58-208ENST00000466694 ENOX1Q8TC92 643 aaKnown RBP19.25■□□□□ 0.67
NUP58-208ENST00000466694 PIGSQ96S52 555 aa19.25■□□□□ 0.67
NUP58-208ENST00000466694 SMCO2A6NFE2 343 aa19.24■□□□□ 0.67
NUP58-208ENST00000466694 ATP1A3P13637 1013 aa19.24■□□□□ 0.67
NUP58-208ENST00000466694 PTGER2P43116 358 aa19.24■□□□□ 0.67
NUP58-208ENST00000466694 AFMP43652 599 aa19.24■□□□□ 0.67
NUP58-208ENST00000466694 NFIAQ12857 509 aa19.24■□□□□ 0.67
NUP58-208ENST00000466694 INF2Q27J81 1249 aa19.24■□□□□ 0.67
NUP58-208ENST00000466694 LRRC47Q8N1G4 583 aaKnown RBP19.24■□□□□ 0.67
NUP58-208ENST00000466694 CCDC17Q96LX7 622 aa19.24■□□□□ 0.67
NUP58-208ENST00000466694 GSDMAQ96QA5 445 aa19.24■□□□□ 0.67
NUP58-208ENST00000466694 DHX36Q9H2U1 1008 aaKnown RBP19.24■□□□□ 0.67
NUP58-208ENST00000466694 ERCC5P28715 1186 aaPredicted RBP19.24■□□□□ 0.67
NUP58-208ENST00000466694 TXLNAP40222 546 aa19.24■□□□□ 0.67
NUP58-208ENST00000466694 IDI2Q9BXS1 227 aa19.24■□□□□ 0.67
NUP58-208ENST00000466694 ZNF277Q9NRM2 450 aaPredicted RBP19.24■□□□□ 0.67
NUP58-208ENST00000466694 FANCLQ9NW38 375 aa19.24■□□□□ 0.67
NUP58-208ENST00000466694 CD2APQ9Y5K6 639 aa19.24■□□□□ 0.67
NUP58-208ENST00000466694 SIPA1L1O43166 1804 aa19.24■□□□□ 0.67
NUP58-208ENST00000466694 FRMPD2Q68DX3 1309 aaPredicted RBP19.23■□□□□ 0.67
NUP58-208ENST00000466694 NPM3O75607 178 aaKnown RBP19.23■□□□□ 0.67
NUP58-208ENST00000466694 PRPHP41219 470 aa19.23■□□□□ 0.67
NUP58-208ENST00000466694 UBASH3AP57075 661 aa19.23■□□□□ 0.67
NUP58-208ENST00000466694 ARID5BQ14865 1188 aa19.23■□□□□ 0.67
NUP58-208ENST00000466694 NONOQ15233 471 aaKnown RBP eCLIP19.23■□□□□ 0.67
NUP58-208ENST00000466694 DALRD3Q5D0E6 543 aaKnown RBP19.23■□□□□ 0.67
NUP58-208ENST00000466694 PDXDC2PQ6P474 469 aa19.23■□□□□ 0.67
NUP58-208ENST00000466694 DTHD1Q6ZMT9 781 aa19.23■□□□□ 0.67
NUP58-208ENST00000466694 TMC6Q7Z403 805 aa19.23■□□□□ 0.67
NUP58-208ENST00000466694 UBA5Q9GZZ9 404 aa19.23■□□□□ 0.67
NUP58-208ENST00000466694 VAT1LQ9HCJ6 419 aa19.23■□□□□ 0.67
NUP58-208ENST00000466694 SERPINA10Q9UK55 444 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms