RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 TMOD4Q9NZQ9 345 aa13.99□□□□□ -0.17
VPS16-206ENST00000466415 KCNJ14Q9UNX9 436 aa13.99□□□□□ -0.17
VPS16-206ENST00000466415 MYH6P13533 1939 aa13.99□□□□□ -0.17
VPS16-206ENST00000466415 PAPPA2Q9BXP8 1791 aa13.99□□□□□ -0.17
VPS16-206ENST00000466415 OTOFQ9HC10 1997 aa13.98□□□□□ -0.17
VPS16-206ENST00000466415 BAG4O95429 457 aaKnown RBP13.98□□□□□ -0.17
VPS16-206ENST00000466415 MMP1P03956 469 aa13.98□□□□□ -0.17
VPS16-206ENST00000466415 NCLP19338 710 aaKnown RBP13.98□□□□□ -0.17
VPS16-206ENST00000466415 CALML3P27482 149 aa13.98□□□□□ -0.17
VPS16-206ENST00000466415 KRT2P35908 639 aa13.98□□□□□ -0.17
VPS16-206ENST00000466415 NAPAP54920 295 aa13.98□□□□□ -0.17
VPS16-206ENST00000466415 BACE1P56817 501 aa13.98□□□□□ -0.17
VPS16-206ENST00000466415 CDC37Q16543 378 aaPredicted RBP13.98□□□□□ -0.17
VPS16-206ENST00000466415 MAP3K11Q16584 847 aa13.98□□□□□ -0.17
VPS16-206ENST00000466415 SLC35G1Q2M3R5 365 aa13.98□□□□□ -0.17
VPS16-206ENST00000466415 WWC2Q6AWC2 1192 aa13.98□□□□□ -0.17
VPS16-206ENST00000466415 CHADLQ6NUI6 762 aa13.98□□□□□ -0.17
VPS16-206ENST00000466415 SAMD1Q6SPF0 538 aaPredicted RBP13.98□□□□□ -0.17
VPS16-206ENST00000466415 BRAPQ7Z569 592 aa13.98□□□□□ -0.17
VPS16-206ENST00000466415 FAM177A1Q8N128 213 aaPredicted RBP13.98□□□□□ -0.17
VPS16-206ENST00000466415 JMJD4Q9H9V9 463 aa13.98□□□□□ -0.17
VPS16-206ENST00000466415 SH3GLB2Q9NR46 395 aa13.98□□□□□ -0.17
VPS16-206ENST00000466415 FEM1BQ9UK73 627 aa13.98□□□□□ -0.17
VPS16-206ENST00000466415 PNMA6FA0A0J9YX94 578 aa13.97□□□□□ -0.17
VPS16-206ENST00000466415 DDX11L8A8MPP1 907 aa13.97□□□□□ -0.17
VPS16-206ENST00000466415 C19orf81C9J6K1 198 aa13.97□□□□□ -0.17
VPS16-206ENST00000466415 ZBTB5O15062 677 aa13.97□□□□□ -0.17
VPS16-206ENST00000466415 KIF23Q02241 960 aaPredicted RBP13.97□□□□□ -0.17
VPS16-206ENST00000466415 KIAA1755Q5JYT7 1200 aa13.97□□□□□ -0.17
VPS16-206ENST00000466415 BTNL9Q6UXG8 535 aa13.97□□□□□ -0.17
VPS16-206ENST00000466415 MOB2Q70IA6 237 aa13.97□□□□□ -0.17
VPS16-206ENST00000466415 DIS3L2Q8IYB7 885 aaKnown RBP13.97□□□□□ -0.17
VPS16-206ENST00000466415 RBM46Q8TBY0 533 aaKnown RBP13.97□□□□□ -0.17
VPS16-206ENST00000466415 TANGO6Q9C0B7 1094 aa13.97□□□□□ -0.17
VPS16-206ENST00000466415 GPBP1L1Q9HC44 474 aaPredicted RBP13.97□□□□□ -0.17
VPS16-206ENST00000466415 BARHL2Q9NY43 387 aa13.97□□□□□ -0.17
VPS16-206ENST00000466415 STXBP3O00186 592 aa13.96□□□□□ -0.17
VPS16-206ENST00000466415 PLA2G6O60733 806 aa13.96□□□□□ -0.17
VPS16-206ENST00000466415 CELF2O95319 508 aaKnown RBP13.96□□□□□ -0.17
VPS16-206ENST00000466415 VCAM1P19320 739 aa13.96□□□□□ -0.17
VPS16-206ENST00000466415 PTMSP20962 102 aa13.96□□□□□ -0.17
VPS16-206ENST00000466415 HMGCS2P54868 508 aa13.96□□□□□ -0.17
VPS16-206ENST00000466415 FKBP1BP68106 108 aa13.96□□□□□ -0.17
VPS16-206ENST00000466415 KRT85P78386 507 aa13.96□□□□□ -0.17
VPS16-206ENST00000466415 PPATQ06203 517 aa13.96□□□□□ -0.17
VPS16-206ENST00000466415 NFKBIBQ15653 356 aa13.96□□□□□ -0.17
VPS16-206ENST00000466415 CSPP1Q1MSJ5 1256 aa13.96□□□□□ -0.17
VPS16-206ENST00000466415 PPP1R18Q6NYC8 613 aa13.96□□□□□ -0.17
VPS16-206ENST00000466415 ERO1BQ86YB8 467 aa13.96□□□□□ -0.17
VPS16-206ENST00000466415 C2orf69Q8N8R5 385 aa13.96□□□□□ -0.17
VPS16-206ENST00000466415 KIFC2Q96AC6 838 aa13.96□□□□□ -0.17
VPS16-206ENST00000466415 OTUD5Q96G74 571 aa13.96□□□□□ -0.17
VPS16-206ENST00000466415 ZNF396Q96N95 335 aaPredicted RBP13.96□□□□□ -0.17
VPS16-206ENST00000466415 PHF20Q9BVI0 1012 aa13.96□□□□□ -0.17
VPS16-206ENST00000466415 RPAP3Q9H6T3 665 aaPredicted RBP13.96□□□□□ -0.17
VPS16-206ENST00000466415 GBA2Q9HCG7 927 aaPredicted RBP13.96□□□□□ -0.17
VPS16-206ENST00000466415 PRR12Q9ULL5 1215 aa13.96□□□□□ -0.17
VPS16-206ENST00000466415 CTDP1Q9Y5B0 961 aaPredicted RBP13.96□□□□□ -0.17
VPS16-206ENST00000466415 SPDYE5A6NIY4 337 aa13.95□□□□□ -0.18
VPS16-206ENST00000466415 TRAF1Q13077 416 aa13.95□□□□□ -0.18
VPS16-206ENST00000466415 QRICH1Q2TAL8 776 aa13.95□□□□□ -0.18
VPS16-206ENST00000466415 GALNT17Q6IS24 598 aa13.95□□□□□ -0.18
VPS16-206ENST00000466415 CLEC17AQ6ZS10 378 aa13.95□□□□□ -0.18
VPS16-206ENST00000466415 MTMR8Q96EF0 704 aa13.95□□□□□ -0.18
VPS16-206ENST00000466415 CLMNQ96JQ2 1002 aa13.95□□□□□ -0.18
VPS16-206ENST00000466415 C12orf42Q96LP6 360 aa13.95□□□□□ -0.18
VPS16-206ENST00000466415 SLF1Q9BQI6 1058 aa13.95□□□□□ -0.18
VPS16-206ENST00000466415 FOXP1Q9H334 677 aaPredicted RBP13.95□□□□□ -0.18
VPS16-206ENST00000466415 C6orf50Q9HD87 102 aa13.95□□□□□ -0.18
VPS16-206ENST00000466415 EMILIN3Q9NT22 766 aa13.95□□□□□ -0.18
VPS16-206ENST00000466415 AFG3L2Q9Y4W6 797 aa13.95□□□□□ -0.18
VPS16-206ENST00000466415 UNCXA6NJT0 531 aa13.94□□□□□ -0.18
VPS16-206ENST00000466415 KIF28PB7ZC32 967 aa13.94□□□□□ -0.18
VPS16-206ENST00000466415 FIBPO43427 364 aa13.94□□□□□ -0.18
VPS16-206ENST00000466415 FLOT1O75955 427 aa13.94□□□□□ -0.18
VPS16-206ENST00000466415 GNA11P29992 359 aa13.94□□□□□ -0.18
VPS16-206ENST00000466415 MCM4P33991 863 aa13.94□□□□□ -0.18
VPS16-206ENST00000466415 DNM1Q05193 864 aaKnown RBP13.94□□□□□ -0.18
VPS16-206ENST00000466415 PPIL2Q13356 520 aa13.94□□□□□ -0.18
VPS16-206ENST00000466415 DGKZQ13574 1117 aa13.94□□□□□ -0.18
VPS16-206ENST00000466415 FBXO11Q86XK2 927 aa13.94□□□□□ -0.18
VPS16-206ENST00000466415 NOSTRINQ8IVI9 506 aa13.94□□□□□ -0.18
VPS16-206ENST00000466415 BICD2Q8TD16 824 aa13.94□□□□□ -0.18
VPS16-206ENST00000466415 OPTNQ96CV9 577 aa13.94□□□□□ -0.18
VPS16-206ENST00000466415 AMNQ9BXJ7 453 aa13.94□□□□□ -0.18
VPS16-206ENST00000466415 PCDHA4Q9UN74 947 aa13.94□□□□□ -0.18
VPS16-206ENST00000466415 PHIPQ8WWQ0 1821 aa13.94□□□□□ -0.18
VPS16-206ENST00000466415 SMCO2A6NFE2 343 aa13.93□□□□□ -0.18
VPS16-206ENST00000466415 BTBD18B2RXH4 712 aa13.93□□□□□ -0.18
VPS16-206ENST00000466415 ADCY7P51828 1080 aa13.93□□□□□ -0.18
VPS16-206ENST00000466415 SNAP25P60880 206 aa13.93□□□□□ -0.18
VPS16-206ENST00000466415 FMR1Q06787 632 aaKnown RBP eCLIP13.93□□□□□ -0.18
VPS16-206ENST00000466415 SH3D19Q5HYK7 790 aa13.93□□□□□ -0.18
VPS16-206ENST00000466415 LDLRAD1Q5T700 205 aa13.93□□□□□ -0.18
VPS16-206ENST00000466415 MYSM1Q5VVJ2 828 aa13.93□□□□□ -0.18
VPS16-206ENST00000466415 ATL3Q6DD88 541 aa13.93□□□□□ -0.18
VPS16-206ENST00000466415 FAM173BQ6P4H8 233 aa13.93□□□□□ -0.18
VPS16-206ENST00000466415 CCDC174Q6PII3 467 aa13.93□□□□□ -0.18
VPS16-206ENST00000466415 GADL1Q6ZQY3 521 aa13.93□□□□□ -0.18
VPS16-206ENST00000466415 BLIDQ8IZY5 108 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms