RNA–Protein interactions for RNA: ENST00000466034.5

SOX2-OT-203, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 926 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-203ENST00000466034 PRAMEF19Q5SWL8 479 aa14.85□□□□□ -0.03
SOX2-OT-203ENST00000466034 GJC2Q5T442 439 aaPredicted RBP14.85□□□□□ -0.03
SOX2-OT-203ENST00000466034 STK11IPQ8N1F8 1099 aa14.85□□□□□ -0.03
SOX2-OT-203ENST00000466034 MSL3Q8N5Y2 521 aaKnown RBP14.85□□□□□ -0.03
SOX2-OT-203ENST00000466034 GMCL1P1Q8NEA9 526 aa14.85□□□□□ -0.03
SOX2-OT-203ENST00000466034 CEP95Q96GE4 821 aa14.85□□□□□ -0.03
SOX2-OT-203ENST00000466034 LRCH3Q96II8 777 aa14.85□□□□□ -0.03
SOX2-OT-203ENST00000466034 NUP88Q99567 741 aaPredicted RBP14.85□□□□□ -0.03
SOX2-OT-203ENST00000466034 UBE2OQ9C0C9 1292 aaKnown RBP14.85□□□□□ -0.03
SOX2-OT-203ENST00000466034 SMCHD1A6NHR9 2005 aa14.85□□□□□ -0.03
SOX2-OT-203ENST00000466034 PRDM1O75626 825 aa14.84□□□□□ -0.03
SOX2-OT-203ENST00000466034 PGK2P07205 417 aa14.84□□□□□ -0.03
SOX2-OT-203ENST00000466034 SLC3A2P08195 630 aaKnown RBP14.84□□□□□ -0.03
SOX2-OT-203ENST00000466034 RTP1P59025 263 aa14.84□□□□□ -0.03
SOX2-OT-203ENST00000466034 PPARAQ07869 468 aa14.84□□□□□ -0.03
SOX2-OT-203ENST00000466034 SNX17Q15036 470 aa14.84□□□□□ -0.03
SOX2-OT-203ENST00000466034 LRRC41Q15345 812 aa14.84□□□□□ -0.03
SOX2-OT-203ENST00000466034 C1orf53Q5VUE5 145 aa14.84□□□□□ -0.03
SOX2-OT-203ENST00000466034 NAPBQ9H115 298 aa14.84□□□□□ -0.03
SOX2-OT-203ENST00000466034 FEM1BQ9UK73 627 aa14.84□□□□□ -0.03
SOX2-OT-203ENST00000466034 DNAJC25-GNG10A0A024R161 153 aa14.83□□□□□ -0.04
SOX2-OT-203ENST00000466034 ZBED4O75132 1171 aa14.83□□□□□ -0.04
SOX2-OT-203ENST00000466034 FDX1P10109 184 aa14.83□□□□□ -0.04
SOX2-OT-203ENST00000466034 ATN1P54259 1190 aaPredicted RBP14.83□□□□□ -0.04
SOX2-OT-203ENST00000466034 OAZ1P54368 228 aa14.83□□□□□ -0.04
SOX2-OT-203ENST00000466034 HDAC1Q13547 482 aaPredicted RBP14.83□□□□□ -0.04
SOX2-OT-203ENST00000466034 FAM47AQ5JRC9 791 aa14.83□□□□□ -0.04
SOX2-OT-203ENST00000466034 PPP4R3BQ5MIZ7 849 aa14.83□□□□□ -0.04
SOX2-OT-203ENST00000466034 ANO1Q5XXA6 986 aa14.83□□□□□ -0.04
SOX2-OT-203ENST00000466034 SNRNP48Q6IEG0 339 aaKnown RBP14.83□□□□□ -0.04
SOX2-OT-203ENST00000466034 SLC39A5Q6ZMH5 540 aa14.83□□□□□ -0.04
SOX2-OT-203ENST00000466034 TICAM2Q86XR7 235 aa14.83□□□□□ -0.04
SOX2-OT-203ENST00000466034 SLC38A10Q9HBR0 1119 aa14.83□□□□□ -0.04
SOX2-OT-203ENST00000466034 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.83□□□□□ -0.04
SOX2-OT-203ENST00000466034 LTBP2Q14767 1821 aa14.82□□□□□ -0.04
SOX2-OT-203ENST00000466034 FOXP2O15409 715 aa14.82□□□□□ -0.04
SOX2-OT-203ENST00000466034 ZNF865P0CJ78 1059 aaPredicted RBP14.82□□□□□ -0.04
SOX2-OT-203ENST00000466034 TSPY3P0CV98 308 aa14.82□□□□□ -0.04
SOX2-OT-203ENST00000466034 TSPY8P0CW00 308 aa14.82□□□□□ -0.04
SOX2-OT-203ENST00000466034 RARBP10826 455 aa14.82□□□□□ -0.04
SOX2-OT-203ENST00000466034 MAMDC4Q6UXC1 1216 aa14.82□□□□□ -0.04
SOX2-OT-203ENST00000466034 ZNF467Q7Z7K2 595 aaPredicted RBP14.82□□□□□ -0.04
SOX2-OT-203ENST00000466034 CRBNQ96SW2 442 aa14.82□□□□□ -0.04
SOX2-OT-203ENST00000466034 PHF24Q9UPV7 400 aa14.82□□□□□ -0.04
SOX2-OT-203ENST00000466034 RIPK3Q9Y572 518 aa14.82□□□□□ -0.04
SOX2-OT-203ENST00000466034 SYNGAP1Q96PV0 1343 aa14.82□□□□□ -0.04
SOX2-OT-203ENST00000466034 BMP3P12645 472 aa14.81□□□□□ -0.04
SOX2-OT-203ENST00000466034 AKR1A1P14550 325 aa14.81□□□□□ -0.04
SOX2-OT-203ENST00000466034 MDM2Q00987 491 aaPredicted RBP14.81□□□□□ -0.04
SOX2-OT-203ENST00000466034 TFAP4Q01664 338 aa14.81□□□□□ -0.04
SOX2-OT-203ENST00000466034 ANKRD45Q5TZF3 282 aa14.81□□□□□ -0.04
SOX2-OT-203ENST00000466034 SLFN13Q68D06 897 aa14.81□□□□□ -0.04
SOX2-OT-203ENST00000466034 LRRC47Q8N1G4 583 aaKnown RBP14.81□□□□□ -0.04
SOX2-OT-203ENST00000466034 CHST13Q8NET6 341 aa14.81□□□□□ -0.04
SOX2-OT-203ENST00000466034 KIFC2Q96AC6 838 aa14.81□□□□□ -0.04
SOX2-OT-203ENST00000466034 EVI5LQ96CN4 794 aa14.81□□□□□ -0.04
SOX2-OT-203ENST00000466034 LBHD1Q9BQE6 289 aaPredicted RBP14.81□□□□□ -0.04
SOX2-OT-203ENST00000466034 XPNPEP3Q9NQH7 507 aa14.81□□□□□ -0.04
SOX2-OT-203ENST00000466034 ZBTB47Q9UFB7 747 aaPredicted RBP14.81□□□□□ -0.04
SOX2-OT-203ENST00000466034 PRKAG2Q9UGJ0 569 aa14.81□□□□□ -0.04
SOX2-OT-203ENST00000466034 FBXO40Q9UH90 709 aa14.81□□□□□ -0.04
SOX2-OT-203ENST00000466034 ANAPC4Q9UJX5 808 aa14.81□□□□□ -0.04
SOX2-OT-203ENST00000466034 CTDP1Q9Y5B0 961 aaPredicted RBP14.81□□□□□ -0.04
SOX2-OT-203ENST00000466034 PLA2G6O60733 806 aa14.8□□□□□ -0.04
SOX2-OT-203ENST00000466034 TAL1P17542 331 aaPredicted RBP14.8□□□□□ -0.04
SOX2-OT-203ENST00000466034 ADCYAP1R1P41586 468 aa14.8□□□□□ -0.04
SOX2-OT-203ENST00000466034 PDE1AP54750 535 aa14.8□□□□□ -0.04
SOX2-OT-203ENST00000466034 AAMPQ13685 434 aa14.8□□□□□ -0.04
SOX2-OT-203ENST00000466034 ALX1Q15699 326 aa14.8□□□□□ -0.04
SOX2-OT-203ENST00000466034 RNF180Q86T96 592 aa14.8□□□□□ -0.04
SOX2-OT-203ENST00000466034 FAM160B2Q86V87 743 aa14.8□□□□□ -0.04
SOX2-OT-203ENST00000466034 DDX11Q96FC9 970 aa14.8□□□□□ -0.04
SOX2-OT-203ENST00000466034 GMCL1Q96IK5 515 aa14.8□□□□□ -0.04
SOX2-OT-203ENST00000466034 RAVER2Q9HCJ3 691 aaKnown RBP14.8□□□□□ -0.04
SOX2-OT-203ENST00000466034 HELLSQ9NRZ9 838 aa14.8□□□□□ -0.04
SOX2-OT-203ENST00000466034 CNPY2Q9Y2B0 182 aa14.8□□□□□ -0.04
SOX2-OT-203ENST00000466034 ATP11BQ9Y2G3 1177 aa14.8□□□□□ -0.04
SOX2-OT-203ENST00000466034 ADAMTS4O75173 837 aa14.79□□□□□ -0.04
SOX2-OT-203ENST00000466034 SNAI1O95863 264 aaPredicted RBP14.79□□□□□ -0.04
SOX2-OT-203ENST00000466034 FGRP09769 529 aa14.79□□□□□ -0.04
SOX2-OT-203ENST00000466034 NOVP48745 357 aa14.79□□□□□ -0.04
SOX2-OT-203ENST00000466034 STAT2P52630 851 aa14.79□□□□□ -0.04
SOX2-OT-203ENST00000466034 CCDC129Q6ZRS4 1044 aa14.79□□□□□ -0.04
SOX2-OT-203ENST00000466034 CPXCR1Q8N123 301 aa14.79□□□□□ -0.04
SOX2-OT-203ENST00000466034 CHURC1Q8WUH1 139 aa14.79□□□□□ -0.04
SOX2-OT-203ENST00000466034 TSEN34Q9BSV6 310 aaKnown RBP14.79□□□□□ -0.04
SOX2-OT-203ENST00000466034 COL6A3P12111 3177 aa14.79□□□□□ -0.04
SOX2-OT-203ENST00000466034 TMEM232C9JQI7 657 aa14.78□□□□□ -0.04
SOX2-OT-203ENST00000466034 ORC4O43929 436 aa14.78□□□□□ -0.04
SOX2-OT-203ENST00000466034 TRIM60Q495X7 471 aa14.78□□□□□ -0.04
SOX2-OT-203ENST00000466034 STAG1Q8WVM7 1258 aa14.78□□□□□ -0.04
SOX2-OT-203ENST00000466034 FGD4Q96M96 766 aa14.78□□□□□ -0.04
SOX2-OT-203ENST00000466034 PDLIM7Q9NR12 457 aa14.78□□□□□ -0.04
SOX2-OT-203ENST00000466034 FAM184BQ9ULE4 1060 aa14.78□□□□□ -0.04
SOX2-OT-203ENST00000466034 ZMYM6O95789 1325 aa14.77□□□□□ -0.04
SOX2-OT-203ENST00000466034 TSPY2A6NKD2 308 aa14.77□□□□□ -0.05
SOX2-OT-203ENST00000466034 PGK1P00558 417 aa14.77□□□□□ -0.05
SOX2-OT-203ENST00000466034 SLC1A4P43007 532 aa14.77□□□□□ -0.05
SOX2-OT-203ENST00000466034 CTDSPL2Q05D32 466 aa14.77□□□□□ -0.05
SOX2-OT-203ENST00000466034 TKFCQ3LXA3 575 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms