RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 PPP1R9AQ9ULJ8 1098 aa6.47□□□□□ -1.37
EXOSC3-204ENST00000465860 UBR3Q6ZT12 1888 aa6.47□□□□□ -1.37
EXOSC3-204ENST00000465860 SIPA1L3O60292 1781 aaPredicted RBP6.46□□□□□ -1.37
EXOSC3-204ENST00000465860 MYH14Q7Z406 1995 aaKnown RBP6.46□□□□□ -1.37
EXOSC3-204ENST00000465860 DYNC1LI2O43237 492 aaPredicted RBP6.46□□□□□ -1.38
EXOSC3-204ENST00000465860 DIAPH1O60610 1272 aaKnown RBP6.46□□□□□ -1.38
EXOSC3-204ENST00000465860 LIG1P18858 919 aa6.46□□□□□ -1.38
EXOSC3-204ENST00000465860 COL5A3P25940 1745 aaPredicted RBP6.46□□□□□ -1.38
EXOSC3-204ENST00000465860 PI16Q6UXB8 463 aa6.46□□□□□ -1.38
EXOSC3-204ENST00000465860 SEZ6L2Q6UXD5 910 aa6.46□□□□□ -1.38
EXOSC3-204ENST00000465860 NFXL1Q6ZNB6 911 aa6.46□□□□□ -1.38
EXOSC3-204ENST00000465860 SMIM5Q71RC9 77 aa6.46□□□□□ -1.38
EXOSC3-204ENST00000465860 TMC7Q7Z402 723 aa6.46□□□□□ -1.38
EXOSC3-204ENST00000465860 AMIGO3Q86WK7 504 aa6.46□□□□□ -1.38
EXOSC3-204ENST00000465860 KRTAP1-3Q8IUG1 177 aa6.46□□□□□ -1.38
EXOSC3-204ENST00000465860 WDR89Q96FK6 387 aaPredicted RBP6.46□□□□□ -1.38
EXOSC3-204ENST00000465860 ZC3H12CQ9C0D7 883 aaKnown RBP6.46□□□□□ -1.38
EXOSC3-204ENST00000465860 CCDC39Q9UFE4 941 aa6.46□□□□□ -1.38
EXOSC3-204ENST00000465860 SPG7Q9UQ90 795 aa6.46□□□□□ -1.38
EXOSC3-204ENST00000465860 UTRNP46939 3433 aa6.46□□□□□ -1.38
EXOSC3-204ENST00000465860 C4BP0C0L5 1744 aa6.45□□□□□ -1.38
EXOSC3-204ENST00000465860 COL24A1Q17RW2 1714 aa6.45□□□□□ -1.38
EXOSC3-204ENST00000465860 TMPRSS2O15393 492 aa6.45□□□□□ -1.38
EXOSC3-204ENST00000465860 PAX4O43316 350 aa6.45□□□□□ -1.38
EXOSC3-204ENST00000465860 PRNPP04156 253 aa6.45□□□□□ -1.38
EXOSC3-204ENST00000465860 SLC15A2Q16348 729 aa6.45□□□□□ -1.38
EXOSC3-204ENST00000465860 MTHFSDQ2M296 383 aaKnown RBP6.45□□□□□ -1.38
EXOSC3-204ENST00000465860 ZNF530Q6P9A1 599 aaPredicted RBP6.45□□□□□ -1.38
EXOSC3-204ENST00000465860 ZNF765Q7L2R6 523 aa6.45□□□□□ -1.38
EXOSC3-204ENST00000465860 KRTAP19-1Q8IUB9 90 aa6.45□□□□□ -1.38
EXOSC3-204ENST00000465860 IFNL2Q8IZJ0 200 aa6.45□□□□□ -1.38
EXOSC3-204ENST00000465860 ABI1Q8IZP0 508 aa6.45□□□□□ -1.38
EXOSC3-204ENST00000465860 PHACTR3Q96KR7 559 aa6.45□□□□□ -1.38
EXOSC3-204ENST00000465860 CCDC86Q9H6F5 360 aaKnown RBP6.45□□□□□ -1.38
EXOSC3-204ENST00000465860 LGR6Q9HBX8 967 aa6.45□□□□□ -1.38
EXOSC3-204ENST00000465860 C1GALT1Q9NS00 363 aa6.45□□□□□ -1.38
EXOSC3-204ENST00000465860 ADGRE2Q9UHX3 823 aa6.45□□□□□ -1.38
EXOSC3-204ENST00000465860 ASAP1Q9ULH1 1129 aa6.45□□□□□ -1.38
EXOSC3-204ENST00000465860 DAGLAQ9Y4D2 1042 aa6.45□□□□□ -1.38
EXOSC3-204ENST00000465860 SYNGAP1Q96PV0 1343 aa6.45□□□□□ -1.38
EXOSC3-204ENST00000465860 TJP1Q07157 1748 aa6.45□□□□□ -1.38
EXOSC3-204ENST00000465860 PALLDQ8WX93 1383 aa6.44□□□□□ -1.38
EXOSC3-204ENST00000465860 U2SURPO15042 1029 aaKnown RBP6.44□□□□□ -1.38
EXOSC3-204ENST00000465860 ZNF862O60290 1169 aa6.44□□□□□ -1.38
EXOSC3-204ENST00000465860 FCGRTP55899 365 aa6.44□□□□□ -1.38
EXOSC3-204ENST00000465860 LCE3BQ5TA77 95 aa6.44□□□□□ -1.38
EXOSC3-204ENST00000465860 DTHD1Q6ZMT9 781 aa6.44□□□□□ -1.38
EXOSC3-204ENST00000465860 DCTN4Q9UJW0 460 aa6.44□□□□□ -1.38
EXOSC3-204ENST00000465860 ANGEL1Q9UNK9 670 aaKnown RBP6.44□□□□□ -1.38
EXOSC3-204ENST00000465860 GNEQ9Y223 722 aaKnown RBP6.44□□□□□ -1.38
EXOSC3-204ENST00000465860 GOLGB1Q14789 3259 aaKnown RBP6.44□□□□□ -1.38
EXOSC3-204ENST00000465860 PNPLA7Q6ZV29 1317 aa6.44□□□□□ -1.38
EXOSC3-204ENST00000465860 UBR2Q8IWV8 1755 aa6.44□□□□□ -1.38
EXOSC3-204ENST00000465860 ZBTB7AO95365 584 aa6.43□□□□□ -1.38
EXOSC3-204ENST00000465860 ITPK1Q13572 414 aa6.43□□□□□ -1.38
EXOSC3-204ENST00000465860 PLEKHO1Q53GL0 409 aaPredicted RBP6.43□□□□□ -1.38
EXOSC3-204ENST00000465860 DUSP27Q5VZP5 1158 aa6.43□□□□□ -1.38
EXOSC3-204ENST00000465860 LINC00116Q8NCU8 138 aa6.43□□□□□ -1.38
EXOSC3-204ENST00000465860 FMNL2Q96PY5 1086 aa6.43□□□□□ -1.38
EXOSC3-204ENST00000465860 BCO2Q9BYV7 579 aa6.43□□□□□ -1.38
EXOSC3-204ENST00000465860 CRIM1Q9NZV1 1036 aa6.43□□□□□ -1.38
EXOSC3-204ENST00000465860 BIN2Q9UBW5 565 aaPredicted RBP6.43□□□□□ -1.38
EXOSC3-204ENST00000465860 ZC3H7BQ9UGR2 993 aaKnown RBP6.43□□□□□ -1.38
EXOSC3-204ENST00000465860 CCNL1Q9UK58 526 aaPredicted RBP6.43□□□□□ -1.38
EXOSC3-204ENST00000465860 PLEKHG2Q9H7P9 1386 aa6.43□□□□□ -1.38
EXOSC3-204ENST00000465860 ZNF831Q5JPB2 1677 aa6.42□□□□□ -1.38
EXOSC3-204ENST00000465860 C4AP0C0L4 1744 aa6.42□□□□□ -1.38
EXOSC3-204ENST00000465860 MRC1P22897 1456 aa6.42□□□□□ -1.38
EXOSC3-204ENST00000465860 GSTP1P09211 210 aaKnown RBP6.42□□□□□ -1.38
EXOSC3-204ENST00000465860 PRKAR2BP31323 418 aa6.42□□□□□ -1.38
EXOSC3-204ENST00000465860 CYP27A1Q02318 531 aa6.42□□□□□ -1.38
EXOSC3-204ENST00000465860 DSC3Q14574 896 aa6.42□□□□□ -1.38
EXOSC3-204ENST00000465860 AMOTQ4VCS5 1084 aa6.42□□□□□ -1.38
EXOSC3-204ENST00000465860 VSIG10LQ86VR7 867 aa6.42□□□□□ -1.38
EXOSC3-204ENST00000465860 FANCD2OSQ96PS1 177 aa6.42□□□□□ -1.38
EXOSC3-204ENST00000465860 GOLGA2P5Q9HBQ8 144 aa6.42□□□□□ -1.38
EXOSC3-204ENST00000465860 LRRC4CQ9HCJ2 640 aa6.42□□□□□ -1.38
EXOSC3-204ENST00000465860 BSDC1Q9NW68 430 aaPredicted RBP6.42□□□□□ -1.38
EXOSC3-204ENST00000465860 STK32BQ9NY57 414 aa6.42□□□□□ -1.38
EXOSC3-204ENST00000465860 TMOD3Q9NYL9 352 aa6.42□□□□□ -1.38
EXOSC3-204ENST00000465860 GPN3Q9UHW5 284 aaPredicted RBP6.42□□□□□ -1.38
EXOSC3-204ENST00000465860 PCDHGC5Q9Y5F6 944 aa6.42□□□□□ -1.38
EXOSC3-204ENST00000465860 CICQ96RK0 1608 aaPredicted RBP6.42□□□□□ -1.38
EXOSC3-204ENST00000465860 KCPQ6ZWJ8 1503 aa6.41□□□□□ -1.38
EXOSC3-204ENST00000465860 PNMA6FA0A0J9YX94 578 aa6.41□□□□□ -1.38
EXOSC3-204ENST00000465860 ERVV-2B6SEH9 535 aa6.41□□□□□ -1.38
EXOSC3-204ENST00000465860 RNMTO43148 476 aaKnown RBP6.41□□□□□ -1.38
EXOSC3-204ENST00000465860 BRD1O95696 1058 aa6.41□□□□□ -1.38
EXOSC3-204ENST00000465860 SLC39A6Q13433 755 aa6.41□□□□□ -1.38
EXOSC3-204ENST00000465860 KIF4BQ2VIQ3 1234 aa6.41□□□□□ -1.38
EXOSC3-204ENST00000465860 OGFOD3Q6PK18 319 aa6.41□□□□□ -1.38
EXOSC3-204ENST00000465860 NXPE4Q6UWF7 544 aa6.41□□□□□ -1.38
EXOSC3-204ENST00000465860 PDZD3Q86UT5 571 aa6.41□□□□□ -1.38
EXOSC3-204ENST00000465860 COL23A1Q86Y22 540 aaPredicted RBP6.41□□□□□ -1.38
EXOSC3-204ENST00000465860 IL17REQ8NFR9 667 aa6.41□□□□□ -1.38
EXOSC3-204ENST00000465860 STK35Q8TDR2 534 aa6.41□□□□□ -1.38
EXOSC3-204ENST00000465860 KRT82Q9NSB4 513 aa6.41□□□□□ -1.38
EXOSC3-204ENST00000465860 TMEM39AQ9NV64 488 aa6.41□□□□□ -1.38
EXOSC3-204ENST00000465860 TREHO43280 583 aa6.4□□□□□ -1.38
EXOSC3-204ENST00000465860 SLFN14P0C7P3 912 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms