RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 LACTBP83111 547 aaPredicted RBP21.6■■□□□ 1.05
SCAMP3-204ENST00000465312 EXOSC10Q01780 885 aaKnown RBP21.6■■□□□ 1.05
SCAMP3-204ENST00000465312 ARHGEF6Q15052 776 aa21.6■■□□□ 1.05
SCAMP3-204ENST00000465312 CCDC144CPQ8IYA2 1237 aa21.6■■□□□ 1.05
SCAMP3-204ENST00000465312 CPXCR1Q8N123 301 aa21.6■■□□□ 1.05
SCAMP3-204ENST00000465312 CTCFLQ8NI51 663 aaPredicted RBP21.6■■□□□ 1.05
SCAMP3-204ENST00000465312 TXNRD2Q9NNW7 524 aa21.6■■□□□ 1.05
SCAMP3-204ENST00000465312 RBPJLQ9UBG7 517 aa21.6■■□□□ 1.05
SCAMP3-204ENST00000465312 VWA5AO00534 786 aa21.59■■□□□ 1.05
SCAMP3-204ENST00000465312 DDAH1O94760 285 aa21.59■■□□□ 1.05
SCAMP3-204ENST00000465312 RXRAP19793 462 aa21.59■■□□□ 1.05
SCAMP3-204ENST00000465312 FCGRTP55899 365 aa21.59■■□□□ 1.05
SCAMP3-204ENST00000465312 NOM1Q5C9Z4 860 aaKnown RBP21.59■■□□□ 1.05
SCAMP3-204ENST00000465312 SYDE2Q5VT97 1194 aa21.59■■□□□ 1.05
SCAMP3-204ENST00000465312 CCDC174Q6PII3 467 aa21.59■■□□□ 1.05
SCAMP3-204ENST00000465312 MICU3Q86XE3 530 aa21.59■■□□□ 1.05
SCAMP3-204ENST00000465312 BRF1Q92994 677 aa21.59■■□□□ 1.05
SCAMP3-204ENST00000465312 ZSWIM6Q9HCJ5 1215 aa21.59■■□□□ 1.05
SCAMP3-204ENST00000465312 PDRG1Q9NUG6 133 aa21.59■■□□□ 1.05
SCAMP3-204ENST00000465312 BTBD7Q9P203 1132 aa21.59■■□□□ 1.05
SCAMP3-204ENST00000465312 PARP14Q460N5 1801 aa21.59■■□□□ 1.05
SCAMP3-204ENST00000465312 KLF18A0A0U1RQI7 1052 aa21.58■■□□□ 1.05
SCAMP3-204ENST00000465312 TNPO2O14787 897 aaKnown RBP21.58■■□□□ 1.05
SCAMP3-204ENST00000465312 CALM1P0DP23 149 aa21.58■■□□□ 1.05
SCAMP3-204ENST00000465312 CALM2P0DP24 149 aa21.58■■□□□ 1.05
SCAMP3-204ENST00000465312 CALM3P0DP25 149 aa21.58■■□□□ 1.05
SCAMP3-204ENST00000465312 PSMC4P43686 418 aa21.58■■□□□ 1.05
SCAMP3-204ENST00000465312 SNAP25P60880 206 aa21.58■■□□□ 1.05
SCAMP3-204ENST00000465312 LBX2Q6XYB7 198 aa21.58■■□□□ 1.05
SCAMP3-204ENST00000465312 TM6SF1Q9BZW5 370 aa21.58■■□□□ 1.05
SCAMP3-204ENST00000465312 UBA5Q9GZZ9 404 aa21.58■■□□□ 1.05
SCAMP3-204ENST00000465312 MORF4L1Q9UBU8 362 aa21.58■■□□□ 1.05
SCAMP3-204ENST00000465312 PRR12Q9ULL5 1215 aa21.58■■□□□ 1.05
SCAMP3-204ENST00000465312 SNHG28P0DPA3 235 aa21.57■■□□□ 1.04
SCAMP3-204ENST00000465312 KIF5BP33176 963 aa21.57■■□□□ 1.04
SCAMP3-204ENST00000465312 APOBRQ0VD83 1088 aa21.57■■□□□ 1.04
SCAMP3-204ENST00000465312 GRM4Q14833 912 aa21.57■■□□□ 1.04
SCAMP3-204ENST00000465312 NCAPG2Q86XI2 1143 aa21.57■■□□□ 1.04
SCAMP3-204ENST00000465312 ARHGAP39Q9C0H5 1083 aa21.57■■□□□ 1.04
SCAMP3-204ENST00000465312 CPVLQ9H3G5 476 aa21.57■■□□□ 1.04
SCAMP3-204ENST00000465312 EFCC1Q9HA90 598 aa21.57■■□□□ 1.04
SCAMP3-204ENST00000465312 VAT1LQ9HCJ6 419 aa21.57■■□□□ 1.04
SCAMP3-204ENST00000465312 PRDM10Q9NQV6 1147 aa21.57■■□□□ 1.04
SCAMP3-204ENST00000465312 TRIM17Q9Y577 477 aa21.57■■□□□ 1.04
SCAMP3-204ENST00000465312 COL11A1P12107 1806 aaPredicted RBP21.57■■□□□ 1.04
SCAMP3-204ENST00000465312 RLFQ13129 1914 aa21.57■■□□□ 1.04
SCAMP3-204ENST00000465312 KLRF2D3W0D1 207 aa21.56■■□□□ 1.04
SCAMP3-204ENST00000465312 ZBTB43O43298 467 aa21.56■■□□□ 1.04
SCAMP3-204ENST00000465312 CNMDO75829 334 aa21.56■■□□□ 1.04
SCAMP3-204ENST00000465312 TMEM132BQ14DG7 1078 aa21.56■■□□□ 1.04
SCAMP3-204ENST00000465312 Q3C1V9 767 aa21.56■■□□□ 1.04
SCAMP3-204ENST00000465312 SNRNP48Q6IEG0 339 aaKnown RBP21.56■■□□□ 1.04
SCAMP3-204ENST00000465312 SPATC1LQ9H0A9 340 aa21.56■■□□□ 1.04
SCAMP3-204ENST00000465312 RAVER2Q9HCJ3 691 aaKnown RBP21.56■■□□□ 1.04
SCAMP3-204ENST00000465312 A0A0G2JMZ2 1700 aa21.55■■□□□ 1.04
SCAMP3-204ENST00000465312 ZSWIM8A7E2V4 1837 aa21.55■■□□□ 1.04
SCAMP3-204ENST00000465312 GOLGA8BA8MQT2 603 aa21.55■■□□□ 1.04
SCAMP3-204ENST00000465312 PLA2G6O60733 806 aa21.55■■□□□ 1.04
SCAMP3-204ENST00000465312 FDX1P10109 184 aa21.55■■□□□ 1.04
SCAMP3-204ENST00000465312 APOA5Q6Q788 366 aa21.55■■□□□ 1.04
SCAMP3-204ENST00000465312 NOL8Q76FK4 1167 aaKnown RBP21.55■■□□□ 1.04
SCAMP3-204ENST00000465312 SGMS1Q86VZ5 419 aa21.55■■□□□ 1.04
SCAMP3-204ENST00000465312 STAG2Q8N3U4 1231 aa21.55■■□□□ 1.04
SCAMP3-204ENST00000465312 COA7Q96BR5 231 aa21.55■■□□□ 1.04
SCAMP3-204ENST00000465312 BACH2Q9BYV9 841 aa21.55■■□□□ 1.04
SCAMP3-204ENST00000465312 IVNS1ABPQ9Y6Y0 642 aa21.55■■□□□ 1.04
SCAMP3-204ENST00000465312 GOLGA8AA7E2F4 631 aa21.54■■□□□ 1.04
SCAMP3-204ENST00000465312 HOXD10P28358 340 aa21.54■■□□□ 1.04
SCAMP3-204ENST00000465312 MAPK4P31152 587 aa21.54■■□□□ 1.04
SCAMP3-204ENST00000465312 STAT3P40763 770 aa21.54■■□□□ 1.04
SCAMP3-204ENST00000465312 TROAPQ12815 778 aa21.54■■□□□ 1.04
SCAMP3-204ENST00000465312 PIBF1Q8WXW3 757 aa21.54■■□□□ 1.04
SCAMP3-204ENST00000465312 MOV10L1Q9BXT6 1211 aaKnown RBP21.54■■□□□ 1.04
SCAMP3-204ENST00000465312 TEX13BQ9BXU2 312 aa21.54■■□□□ 1.04
SCAMP3-204ENST00000465312 PORCNQ9H237 461 aa21.54■■□□□ 1.04
SCAMP3-204ENST00000465312 SLC38A10Q9HBR0 1119 aa21.54■■□□□ 1.04
SCAMP3-204ENST00000465312 HOMER2Q9NSB8 354 aa21.54■■□□□ 1.04
SCAMP3-204ENST00000465312 MAD2L2Q9UI95 211 aa21.54■■□□□ 1.04
SCAMP3-204ENST00000465312 NEK4P51957 841 aa21.53■■□□□ 1.04
SCAMP3-204ENST00000465312 POTEEQ6S8J3 1075 aa21.53■■□□□ 1.04
SCAMP3-204ENST00000465312 BTNL9Q6UXG8 535 aa21.53■■□□□ 1.04
SCAMP3-204ENST00000465312 CTU1Q7Z7A3 348 aaKnown RBP21.53■■□□□ 1.04
SCAMP3-204ENST00000465312 HOMER1Q86YM7 354 aa21.53■■□□□ 1.04
SCAMP3-204ENST00000465312 ADGRF4Q8IZF3 695 aa21.53■■□□□ 1.04
SCAMP3-204ENST00000465312 TRIM47Q96LD4 638 aa21.53■■□□□ 1.04
SCAMP3-204ENST00000465312 LARP6Q9BRS8 491 aaKnown RBP21.53■■□□□ 1.04
SCAMP3-204ENST00000465312 BRPF3Q9ULD4 1205 aa21.53■■□□□ 1.04
SCAMP3-204ENST00000465312 ADAMTS5Q9UNA0 930 aa21.53■■□□□ 1.04
SCAMP3-204ENST00000465312 MGAMO43451 1857 aa21.53■■□□□ 1.04
SCAMP3-204ENST00000465312 SLC25A27O95847 323 aa21.52■■□□□ 1.04
SCAMP3-204ENST00000465312 ERCC3P19447 782 aa21.52■■□□□ 1.04
SCAMP3-204ENST00000465312 GNAQP50148 359 aa21.52■■□□□ 1.04
SCAMP3-204ENST00000465312 METAP2P50579 478 aaKnown RBP eCLIP21.52■■□□□ 1.04
SCAMP3-204ENST00000465312 CDC37Q16543 378 aaPredicted RBP21.52■■□□□ 1.04
SCAMP3-204ENST00000465312 RTN1Q16799 776 aa21.52■■□□□ 1.04
SCAMP3-204ENST00000465312 CCPG1Q9ULG6 757 aa21.52■■□□□ 1.04
SCAMP3-204ENST00000465312 PALM3A6NDB9 673 aaPredicted RBP21.51■■□□□ 1.03
SCAMP3-204ENST00000465312 ALAS1P13196 640 aa21.51■■□□□ 1.03
SCAMP3-204ENST00000465312 COPB2P35606 906 aa21.51■■□□□ 1.03
SCAMP3-204ENST00000465312 OTOP1Q7RTM1 612 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms