RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 GATA6Q92908 595 aa7.53□□□□□ -1.2
CACNA1C-223ENST00000465278 TM9SF2Q99805 663 aa7.53□□□□□ -1.2
CACNA1C-223ENST00000465278 DUSP23Q9BVJ7 150 aa7.53□□□□□ -1.2
CACNA1C-223ENST00000465278 CEP131Q9UPN4 1083 aa7.53□□□□□ -1.2
CACNA1C-223ENST00000465278 A0A1W2PQH9 124 aa7.52□□□□□ -1.21
CACNA1C-223ENST00000465278 MEIS3P2A8K0S8 358 aa7.52□□□□□ -1.21
CACNA1C-223ENST00000465278 WDR64B1ANS9 1081 aa7.52□□□□□ -1.21
CACNA1C-223ENST00000465278 RGS13O14921 159 aa7.52□□□□□ -1.21
CACNA1C-223ENST00000465278 GUCY2CP25092 1073 aa7.52□□□□□ -1.21
CACNA1C-223ENST00000465278 INTS3Q68E01 1043 aaKnown RBP7.52□□□□□ -1.21
CACNA1C-223ENST00000465278 ZAR1Q86SH2 424 aa7.52□□□□□ -1.21
CACNA1C-223ENST00000465278 TTC6Q86TZ1 520 aa7.52□□□□□ -1.21
CACNA1C-223ENST00000465278 OR6P1Q8NGX9 317 aa7.52□□□□□ -1.21
CACNA1C-223ENST00000465278 GIMAP7Q8NHV1 300 aa7.52□□□□□ -1.21
CACNA1C-223ENST00000465278 PPP1R13LQ8WUF5 828 aa7.52□□□□□ -1.21
CACNA1C-223ENST00000465278 HNRNPLLQ8WVV9 542 aaKnown RBP7.52□□□□□ -1.21
CACNA1C-223ENST00000465278 ST7Q9NRC1 585 aa7.52□□□□□ -1.21
CACNA1C-223ENST00000465278 PRKAG3Q9UGI9 489 aa7.52□□□□□ -1.21
CACNA1C-223ENST00000465278 TRPC5Q9UL62 973 aaPredicted RBP7.52□□□□□ -1.21
CACNA1C-223ENST00000465278 R3HCC1Q9Y3T6 440 aaKnown RBP7.52□□□□□ -1.21
CACNA1C-223ENST00000465278 LTBP3Q9NS15 1303 aa7.52□□□□□ -1.21
CACNA1C-223ENST00000465278 PLXNC1O60486 1568 aa7.51□□□□□ -1.21
CACNA1C-223ENST00000465278 GLI3P10071 1580 aa7.51□□□□□ -1.21
CACNA1C-223ENST00000465278 NLRP1Q9C000 1473 aa7.51□□□□□ -1.21
CACNA1C-223ENST00000465278 UBOX5O94941 541 aa7.51□□□□□ -1.21
CACNA1C-223ENST00000465278 F13BP05160 661 aa7.51□□□□□ -1.21
CACNA1C-223ENST00000465278 RBL2Q08999 1139 aa7.51□□□□□ -1.21
CACNA1C-223ENST00000465278 NFIAQ12857 509 aa7.51□□□□□ -1.21
CACNA1C-223ENST00000465278 ZNF765Q7L2R6 523 aa7.51□□□□□ -1.21
CACNA1C-223ENST00000465278 DNAJC5GQ8N7S2 189 aa7.51□□□□□ -1.21
CACNA1C-223ENST00000465278 CYB5D2Q8WUJ1 264 aa7.51□□□□□ -1.21
CACNA1C-223ENST00000465278 FAM86C1Q9NVL1 165 aa7.51□□□□□ -1.21
CACNA1C-223ENST00000465278 TPX2Q9ULW0 747 aaKnown RBP7.51□□□□□ -1.21
CACNA1C-223ENST00000465278 PCDHB10Q9UN67 800 aa7.51□□□□□ -1.21
CACNA1C-223ENST00000465278 MAST1Q9Y2H9 1570 aa7.5□□□□□ -1.21
CACNA1C-223ENST00000465278 UBR1Q8IWV7 1749 aa7.5□□□□□ -1.21
CACNA1C-223ENST00000465278 CARMIL1Q5VZK9 1371 aa7.5□□□□□ -1.21
CACNA1C-223ENST00000465278 TNFRSF10CO14798 259 aa7.5□□□□□ -1.21
CACNA1C-223ENST00000465278 EOMESO95936 686 aa7.5□□□□□ -1.21
CACNA1C-223ENST00000465278 H2AFB1P0C5Y9 115 aa7.5□□□□□ -1.21
CACNA1C-223ENST00000465278 H2AFB2P0C5Z0 115 aa7.5□□□□□ -1.21
CACNA1C-223ENST00000465278 FSTP19883 344 aa7.5□□□□□ -1.21
CACNA1C-223ENST00000465278 CHMP4BP1P59074 171 aa7.5□□□□□ -1.21
CACNA1C-223ENST00000465278 LARP1BQ659C4 914 aaKnown RBP7.5□□□□□ -1.21
CACNA1C-223ENST00000465278 TMEM192Q8IY95 271 aa7.5□□□□□ -1.21
CACNA1C-223ENST00000465278 UBXN4Q92575 508 aa7.5□□□□□ -1.21
CACNA1C-223ENST00000465278 ZNF512BQ96KM6 892 aaPredicted RBP7.5□□□□□ -1.21
CACNA1C-223ENST00000465278 NKTRP30414 1462 aaKnown RBP7.49□□□□□ -1.21
CACNA1C-223ENST00000465278 MSH6P52701 1360 aa7.49□□□□□ -1.21
CACNA1C-223ENST00000465278 CASZ1Q86V15 1759 aa7.49□□□□□ -1.21
CACNA1C-223ENST00000465278 IGLV1-40P01703 118 aa7.49□□□□□ -1.21
CACNA1C-223ENST00000465278 CASP7P55210 303 aa7.49□□□□□ -1.21
CACNA1C-223ENST00000465278 DUSP27Q5VZP5 1158 aa7.49□□□□□ -1.21
CACNA1C-223ENST00000465278 CKAP2LQ8IYA6 745 aa7.49□□□□□ -1.21
CACNA1C-223ENST00000465278 DNAJB8Q8NHS0 232 aa7.49□□□□□ -1.21
CACNA1C-223ENST00000465278 SHKBP1Q8TBC3 707 aa7.49□□□□□ -1.21
CACNA1C-223ENST00000465278 HEXIM2Q96MH2 286 aaKnown RBP7.49□□□□□ -1.21
CACNA1C-223ENST00000465278 HIRIP3Q9BW71 556 aaPredicted RBP7.49□□□□□ -1.21
CACNA1C-223ENST00000465278 SEMA6BQ9H3T3 888 aa7.49□□□□□ -1.21
CACNA1C-223ENST00000465278 ATG3Q9NT62 314 aa7.49□□□□□ -1.21
CACNA1C-223ENST00000465278 ACTR10Q9NZ32 417 aa7.49□□□□□ -1.21
CACNA1C-223ENST00000465278 SETD5Q9C0A6 1442 aa7.49□□□□□ -1.21
CACNA1C-223ENST00000465278 TNRQ92752 1358 aa7.48□□□□□ -1.21
CACNA1C-223ENST00000465278 DISP2A7MBM2 1401 aa7.48□□□□□ -1.21
CACNA1C-223ENST00000465278 KLF4O43474 513 aa7.48□□□□□ -1.21
CACNA1C-223ENST00000465278 DYRK3O43781 588 aa7.48□□□□□ -1.21
CACNA1C-223ENST00000465278 LRRN2O75325 713 aa7.48□□□□□ -1.21
CACNA1C-223ENST00000465278 CBX7O95931 251 aa7.48□□□□□ -1.21
CACNA1C-223ENST00000465278 TP53P04637 393 aaPredicted RBP7.48□□□□□ -1.21
CACNA1C-223ENST00000465278 CYP27C1Q4G0S4 372 aa7.48□□□□□ -1.21
CACNA1C-223ENST00000465278 FAM214BQ7L5A3 538 aa7.48□□□□□ -1.21
CACNA1C-223ENST00000465278 THEMISQ8N1K5 641 aaPredicted RBP7.48□□□□□ -1.21
CACNA1C-223ENST00000465278 MICAL1Q8TDZ2 1067 aa7.48□□□□□ -1.21
CACNA1C-223ENST00000465278 SLC6A18Q96N87 628 aa7.48□□□□□ -1.21
CACNA1C-223ENST00000465278 DBNDD2Q9BQY9 259 aa7.48□□□□□ -1.21
CACNA1C-223ENST00000465278 LRRC4CQ9HCJ2 640 aa7.48□□□□□ -1.21
CACNA1C-223ENST00000465278 MROH1Q8NDA8 1641 aa7.48□□□□□ -1.21
CACNA1C-223ENST00000465278 CAMSAP2Q08AD1 1489 aa7.48□□□□□ -1.21
CACNA1C-223ENST00000465278 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.47□□□□□ -1.21
CACNA1C-223ENST00000465278 SAMD9Q5K651 1589 aa7.47□□□□□ -1.21
CACNA1C-223ENST00000465278 GNPTABQ3T906 1256 aa7.47□□□□□ -1.21
CACNA1C-223ENST00000465278 TNNI3KQ59H18 835 aa7.47□□□□□ -1.21
CACNA1C-223ENST00000465278 TDRD10Q5VZ19 366 aaKnown RBP7.47□□□□□ -1.21
CACNA1C-223ENST00000465278 TAB3Q8N5C8 712 aaPredicted RBP7.47□□□□□ -1.21
CACNA1C-223ENST00000465278 CELF2-AS1Q8N7Q2 184 aa7.47□□□□□ -1.21
CACNA1C-223ENST00000465278 KREMEN1Q96MU8 473 aa7.47□□□□□ -1.21
CACNA1C-223ENST00000465278 OSBPL1AQ9BXW6 950 aa7.47□□□□□ -1.21
CACNA1C-223ENST00000465278 TRIM55Q9BYV6 548 aa7.47□□□□□ -1.21
CACNA1C-223ENST00000465278 DLC1Q96QB1 1528 aa7.47□□□□□ -1.21
CACNA1C-223ENST00000465278 CLEC3AO75596 197 aa7.46□□□□□ -1.22
CACNA1C-223ENST00000465278 DDAH1O94760 285 aa7.46□□□□□ -1.22
CACNA1C-223ENST00000465278 IGHA1P01876 353 aa7.46□□□□□ -1.22
CACNA1C-223ENST00000465278 RAB33AQ14088 237 aa7.46□□□□□ -1.22
CACNA1C-223ENST00000465278 JMYQ8N9B5 988 aa7.46□□□□□ -1.22
CACNA1C-223ENST00000465278 FAM181AQ8N9Y4 354 aa7.46□□□□□ -1.22
CACNA1C-223ENST00000465278 ARMC5Q96C12 935 aa7.46□□□□□ -1.22
CACNA1C-223ENST00000465278 DHRS1Q96LJ7 313 aa7.46□□□□□ -1.22
CACNA1C-223ENST00000465278 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.46□□□□□ -1.22
CACNA1C-223ENST00000465278 SPON1Q9HCB6 807 aa7.46□□□□□ -1.22
CACNA1C-223ENST00000465278 TNRC18O15417 2968 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms