RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 VWCEQ96DN2 955 aa18.23■□□□□ 0.51
HDAC6-214ENST00000465269 FAM184BQ9ULE4 1060 aa18.23■□□□□ 0.51
HDAC6-214ENST00000465269 MROH7Q68CQ1 1323 aa18.23■□□□□ 0.51
HDAC6-214ENST00000465269 A0A0U1RQG5 324 aaPredicted RBP18.22■□□□□ 0.51
HDAC6-214ENST00000465269 SMIM22K7EJ46 135 aa18.22■□□□□ 0.51
HDAC6-214ENST00000465269 ARHGEF15O94989 841 aa18.22■□□□□ 0.51
HDAC6-214ENST00000465269 SLC25A27O95847 323 aa18.22■□□□□ 0.51
HDAC6-214ENST00000465269 BEX3Q00994 111 aa18.22■□□□□ 0.51
HDAC6-214ENST00000465269 TNNI3KQ59H18 835 aa18.22■□□□□ 0.51
HDAC6-214ENST00000465269 CCDC158Q5M9N0 1113 aa18.22■□□□□ 0.51
HDAC6-214ENST00000465269 RIOX2Q8IUF8 465 aa18.22■□□□□ 0.51
HDAC6-214ENST00000465269 ANTXR1Q9H6X2 564 aa18.22■□□□□ 0.51
HDAC6-214ENST00000465269 FPGT-TNNI3KV9GXZ4 949 aa18.22■□□□□ 0.51
HDAC6-214ENST00000465269 ZBBXA8MT70 800 aa18.21■□□□□ 0.51
HDAC6-214ENST00000465269 CD4P01730 458 aa18.21■□□□□ 0.51
HDAC6-214ENST00000465269 MRE11P49959 708 aa18.21■□□□□ 0.51
HDAC6-214ENST00000465269 SPRED2Q7Z698 418 aa18.21■□□□□ 0.51
HDAC6-214ENST00000465269 DYNLL2Q96FJ2 89 aa18.21■□□□□ 0.51
HDAC6-214ENST00000465269 WNT8AQ9H1J5 351 aa18.21■□□□□ 0.51
HDAC6-214ENST00000465269 HIPK3Q9H422 1215 aa18.21■□□□□ 0.51
HDAC6-214ENST00000465269 HDAC5Q9UQL6 1122 aa18.21■□□□□ 0.51
HDAC6-214ENST00000465269 DIS3Q9Y2L1 958 aaKnown RBP18.21■□□□□ 0.51
HDAC6-214ENST00000465269 SLC4A7Q9Y6M7 1214 aa18.21■□□□□ 0.51
HDAC6-214ENST00000465269 MCM3APO60318 1980 aa18.21■□□□□ 0.5
HDAC6-214ENST00000465269 NAV1Q8NEY1 1877 aa18.2■□□□□ 0.5
HDAC6-214ENST00000465269 TRIOO75962 3097 aa18.2■□□□□ 0.5
HDAC6-214ENST00000465269 CTAGE5O15320 804 aa18.2■□□□□ 0.5
HDAC6-214ENST00000465269 DUSP11O75319 330 aaKnown RBP18.2■□□□□ 0.5
HDAC6-214ENST00000465269 CA3P07451 260 aa18.2■□□□□ 0.5
HDAC6-214ENST00000465269 AKR1B1P15121 316 aa18.2■□□□□ 0.5
HDAC6-214ENST00000465269 STAT3P40763 770 aa18.2■□□□□ 0.5
HDAC6-214ENST00000465269 SLC4A3P48751 1232 aa18.2■□□□□ 0.5
HDAC6-214ENST00000465269 GNASQ5JWF2 1037 aa18.2■□□□□ 0.5
HDAC6-214ENST00000465269 SCLYQ96I15 445 aa18.2■□□□□ 0.5
HDAC6-214ENST00000465269 SNX27Q96L92 541 aa18.2■□□□□ 0.5
HDAC6-214ENST00000465269 TRPV6Q9H1D0 765 aa18.2■□□□□ 0.5
HDAC6-214ENST00000465269 MTIF3Q9H2K0 278 aaKnown RBP18.2■□□□□ 0.5
HDAC6-214ENST00000465269 VCPKMTQ9H867 229 aa18.2■□□□□ 0.5
HDAC6-214ENST00000465269 ZNF214Q9UL59 606 aaPredicted RBP18.2■□□□□ 0.5
HDAC6-214ENST00000465269 TNNQ9UQP3 1299 aa18.2■□□□□ 0.5
HDAC6-214ENST00000465269 PCDHA11Q9Y5I1 949 aa18.2■□□□□ 0.5
HDAC6-214ENST00000465269 RBAK-RBAKDNI3L0D1 243 aa18.19■□□□□ 0.5
HDAC6-214ENST00000465269 TLR3O15455 904 aaKnown RBP18.19■□□□□ 0.5
HDAC6-214ENST00000465269 CST5P28325 142 aaPredicted RBP18.19■□□□□ 0.5
HDAC6-214ENST00000465269 TTLL4Q14679 1199 aa18.19■□□□□ 0.5
HDAC6-214ENST00000465269 CCDC144BQ3MJ40 725 aa18.19■□□□□ 0.5
HDAC6-214ENST00000465269 REPS2Q8NFH8 660 aa18.19■□□□□ 0.5
HDAC6-214ENST00000465269 RIOK1Q9BRS2 568 aaKnown RBP18.19■□□□□ 0.5
HDAC6-214ENST00000465269 API5Q9BZZ5 524 aaKnown RBP18.19■□□□□ 0.5
HDAC6-214ENST00000465269 DBNLQ9UJU6 430 aaKnown RBP18.19■□□□□ 0.5
HDAC6-214ENST00000465269 ADAMTS5Q9UNA0 930 aa18.19■□□□□ 0.5
HDAC6-214ENST00000465269 TMX2Q9Y320 296 aa18.19■□□□□ 0.5
HDAC6-214ENST00000465269 RIPK3Q9Y572 518 aa18.19■□□□□ 0.5
HDAC6-214ENST00000465269 E9PSI1 815 aa18.18■□□□□ 0.5
HDAC6-214ENST00000465269 VWA5AO00534 786 aa18.18■□□□□ 0.5
HDAC6-214ENST00000465269 GTPBP6O43824 516 aaPredicted RBP18.18■□□□□ 0.5
HDAC6-214ENST00000465269 GNAI3P08754 354 aa18.18■□□□□ 0.5
HDAC6-214ENST00000465269 ATP2A2P16615 1042 aaKnown RBP18.18■□□□□ 0.5
HDAC6-214ENST00000465269 ICA1Q05084 483 aa18.18■□□□□ 0.5
HDAC6-214ENST00000465269 SLFN5Q08AF3 891 aa18.18■□□□□ 0.5
HDAC6-214ENST00000465269 ACVR2BQ13705 512 aa18.18■□□□□ 0.5
HDAC6-214ENST00000465269 CXCL17Q6UXB2 119 aa18.18■□□□□ 0.5
HDAC6-214ENST00000465269 PCSK9Q8NBP7 692 aaKnown RBP18.18■□□□□ 0.5
HDAC6-214ENST00000465269 ARNTL2Q8WYA1 636 aa18.18■□□□□ 0.5
HDAC6-214ENST00000465269 UIMC1Q96RL1 719 aa18.18■□□□□ 0.5
HDAC6-214ENST00000465269 NOC4LQ9BVI4 516 aaKnown RBP18.18■□□□□ 0.5
HDAC6-214ENST00000465269 CCDC8Q9H0W5 538 aaPredicted RBP18.18■□□□□ 0.5
HDAC6-214ENST00000465269 MCM9Q9NXL9 1143 aa18.18■□□□□ 0.5
HDAC6-214ENST00000465269 WDR46O15213 610 aaKnown RBP18.17■□□□□ 0.5
HDAC6-214ENST00000465269 RAD21O60216 631 aa18.17■□□□□ 0.5
HDAC6-214ENST00000465269 GJA9P57773 515 aa18.17■□□□□ 0.5
HDAC6-214ENST00000465269 TMEM179Q6ZVK1 233 aa18.17■□□□□ 0.5
HDAC6-214ENST00000465269 SDR42E1Q8WUS8 393 aa18.17■□□□□ 0.5
HDAC6-214ENST00000465269 HLA-CQ95604 372 aa18.17■□□□□ 0.5
HDAC6-214ENST00000465269 UPF3AQ9H1J1 476 aaKnown RBP18.17■□□□□ 0.5
HDAC6-214ENST00000465269 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.17■□□□□ 0.5
HDAC6-214ENST00000465269 GRIN2DO15399 1336 aa18.17■□□□□ 0.5
HDAC6-214ENST00000465269 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.16■□□□□ 0.5
HDAC6-214ENST00000465269 PI4K2BG5E9Z4 385 aa18.16■□□□□ 0.5
HDAC6-214ENST00000465269 FAM83BQ5T0W9 1011 aa18.16■□□□□ 0.5
HDAC6-214ENST00000465269 DDX11Q96FC9 970 aa18.16■□□□□ 0.5
HDAC6-214ENST00000465269 FGD4Q96M96 766 aa18.16■□□□□ 0.5
HDAC6-214ENST00000465269 NUP88Q99567 741 aaPredicted RBP18.16■□□□□ 0.5
HDAC6-214ENST00000465269 ARHGEF10LQ9HCE6 1279 aa18.16■□□□□ 0.5
HDAC6-214ENST00000465269 PPP1R9AQ9ULJ8 1098 aa18.16■□□□□ 0.5
HDAC6-214ENST00000465269 COG5Q9UP83 839 aa18.16■□□□□ 0.5
HDAC6-214ENST00000465269 DDX49Q9Y6V7 483 aaKnown RBP18.16■□□□□ 0.5
HDAC6-214ENST00000465269 ASTN1O14525 1302 aa18.16■□□□□ 0.5
HDAC6-214ENST00000465269 USP34Q70CQ2 3546 aa18.15■□□□□ 0.5
HDAC6-214ENST00000465269 POU3F3P20264 500 aaPredicted RBP18.15■□□□□ 0.5
HDAC6-214ENST00000465269 OS9Q13438 667 aaPredicted RBP18.15■□□□□ 0.5
HDAC6-214ENST00000465269 TMEM67Q5HYA8 995 aa18.15■□□□□ 0.5
HDAC6-214ENST00000465269 CFAP54Q96N23 3096 aa18.14■□□□□ 0.49
HDAC6-214ENST00000465269 DNAJC25-GNG10A0A024R161 153 aa18.14■□□□□ 0.49
HDAC6-214ENST00000465269 CYP2D7A0A087X1C5 515 aa18.14■□□□□ 0.49
HDAC6-214ENST00000465269 MAGEB6P1A0A0J9YX57 407 aa18.14■□□□□ 0.49
HDAC6-214ENST00000465269 B4GALT4O60513 344 aa18.14■□□□□ 0.49
HDAC6-214ENST00000465269 GNAI2P04899 355 aa18.14■□□□□ 0.49
HDAC6-214ENST00000465269 EEF2P13639 858 aaKnown RBP18.14■□□□□ 0.49
HDAC6-214ENST00000465269 PSMC6P62333 389 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms