RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 ROBO3Q96MS0 1386 aa16.42■□□□□ 0.22
RPP40-203ENST00000464646 TSPY2A6NKD2 308 aa16.42■□□□□ 0.22
RPP40-203ENST00000464646 SOX1O00570 391 aaPredicted RBP16.42■□□□□ 0.22
RPP40-203ENST00000464646 RARBP10826 455 aa16.42■□□□□ 0.22
RPP40-203ENST00000464646 RTP1P59025 263 aa16.42■□□□□ 0.22
RPP40-203ENST00000464646 CTDSPL2Q05D32 466 aa16.42■□□□□ 0.22
RPP40-203ENST00000464646 TINF2Q9BSI4 451 aa16.42■□□□□ 0.22
RPP40-203ENST00000464646 TEX13BQ9BXU2 312 aa16.42■□□□□ 0.22
RPP40-203ENST00000464646 MTMR4Q9NYA4 1195 aa16.42■□□□□ 0.22
RPP40-203ENST00000464646 STX8Q9UNK0 236 aa16.42■□□□□ 0.22
RPP40-203ENST00000464646 CNPY2Q9Y2B0 182 aa16.42■□□□□ 0.22
RPP40-203ENST00000464646 TMEM232C9JQI7 657 aa16.41■□□□□ 0.22
RPP40-203ENST00000464646 RANBP6O60518 1105 aaKnown RBP16.41■□□□□ 0.22
RPP40-203ENST00000464646 BMP8BP34820 402 aa16.41■□□□□ 0.22
RPP40-203ENST00000464646 ADCYAP1R1P41586 468 aa16.41■□□□□ 0.22
RPP40-203ENST00000464646 RRP12Q5JTH9 1297 aaKnown RBP16.41■□□□□ 0.22
RPP40-203ENST00000464646 B4GALNT3Q6L9W6 998 aa16.41■□□□□ 0.22
RPP40-203ENST00000464646 TDHQ8IZJ6 230 aa16.41■□□□□ 0.22
RPP40-203ENST00000464646 ANKRD35Q8N283 1001 aa16.41■□□□□ 0.22
RPP40-203ENST00000464646 RILPL2Q969X0 211 aa16.41■□□□□ 0.22
RPP40-203ENST00000464646 EVI5LQ96CN4 794 aa16.41■□□□□ 0.22
RPP40-203ENST00000464646 XPNPEP3Q9NQH7 507 aa16.41■□□□□ 0.22
RPP40-203ENST00000464646 HOMER2Q9NSB8 354 aa16.41■□□□□ 0.22
RPP40-203ENST00000464646 FEM1BQ9UK73 627 aa16.41■□□□□ 0.22
RPP40-203ENST00000464646 ZHX1Q9UKY1 873 aaPredicted RBP16.41■□□□□ 0.22
RPP40-203ENST00000464646 ZNF214Q9UL59 606 aaPredicted RBP16.41■□□□□ 0.22
RPP40-203ENST00000464646 ADAMTS5Q9UNA0 930 aa16.41■□□□□ 0.22
RPP40-203ENST00000464646 BMP3P12645 472 aa16.4■□□□□ 0.22
RPP40-203ENST00000464646 LRRC41Q15345 812 aa16.4■□□□□ 0.22
RPP40-203ENST00000464646 NEDD1Q8NHV4 660 aa16.4■□□□□ 0.22
RPP40-203ENST00000464646 GREB1LQ9C091 1923 aaPredicted RBP16.4■□□□□ 0.22
RPP40-203ENST00000464646 PGK1P00558 417 aa16.39■□□□□ 0.21
RPP40-203ENST00000464646 TAL1P17542 331 aaPredicted RBP16.39■□□□□ 0.21
RPP40-203ENST00000464646 SLC1A4P43007 532 aa16.39■□□□□ 0.21
RPP40-203ENST00000464646 ZNF792Q3KQV3 632 aa16.39■□□□□ 0.21
RPP40-203ENST00000464646 SLC39A5Q6ZMH5 540 aa16.39■□□□□ 0.21
RPP40-203ENST00000464646 PPP4R3CPQ6ZMV5 832 aa16.39■□□□□ 0.21
RPP40-203ENST00000464646 RNF180Q86T96 592 aa16.39■□□□□ 0.21
RPP40-203ENST00000464646 REPS2Q8NFH8 660 aa16.39■□□□□ 0.21
RPP40-203ENST00000464646 LNPKQ9C0E8 428 aa16.39■□□□□ 0.21
RPP40-203ENST00000464646 INCENPQ9NQS7 918 aa16.39■□□□□ 0.21
RPP40-203ENST00000464646 RIPK3Q9Y572 518 aa16.39■□□□□ 0.21
RPP40-203ENST00000464646 IGKV6D-41A0A0C4DH26 115 aa16.38■□□□□ 0.21
RPP40-203ENST00000464646 AKR1A1P14550 325 aa16.38■□□□□ 0.21
RPP40-203ENST00000464646 MCCP23508 829 aa16.38■□□□□ 0.21
RPP40-203ENST00000464646 STAT2P52630 851 aa16.38■□□□□ 0.21
RPP40-203ENST00000464646 PDE1AP54750 535 aa16.38■□□□□ 0.21
RPP40-203ENST00000464646 CCDC96Q2M329 555 aa16.38■□□□□ 0.21
RPP40-203ENST00000464646 TRIM60Q495X7 471 aa16.38■□□□□ 0.21
RPP40-203ENST00000464646 PPP4R3BQ5MIZ7 849 aa16.38■□□□□ 0.21
RPP40-203ENST00000464646 CCDC174Q6PII3 467 aa16.38■□□□□ 0.21
RPP40-203ENST00000464646 VTI1AQ96AJ9 217 aa16.38■□□□□ 0.21
RPP40-203ENST00000464646 LENG1Q96BZ8 264 aaPredicted RBP16.38■□□□□ 0.21
RPP40-203ENST00000464646 DIS3Q9Y2L1 958 aaKnown RBP16.38■□□□□ 0.21
RPP40-203ENST00000464646 VPS53Q5VIR6 699 aa16.37■□□□□ 0.21
RPP40-203ENST00000464646 KCTD1Q719H9 257 aa16.37■□□□□ 0.21
RPP40-203ENST00000464646 GMCL1P1Q8NEA9 526 aa16.37■□□□□ 0.21
RPP40-203ENST00000464646 CHURC1Q8WUH1 139 aa16.37■□□□□ 0.21
RPP40-203ENST00000464646 MKL1Q969V6 931 aa16.37■□□□□ 0.21
RPP40-203ENST00000464646 RWDD1Q9H446 243 aaPredicted RBP16.37■□□□□ 0.21
RPP40-203ENST00000464646 HELLSQ9NRZ9 838 aa16.37■□□□□ 0.21
RPP40-203ENST00000464646 FBXO40Q9UH90 709 aa16.37■□□□□ 0.21
RPP40-203ENST00000464646 FAM184BQ9ULE4 1060 aa16.37■□□□□ 0.21
RPP40-203ENST00000464646 NMT2O60551 498 aa16.36■□□□□ 0.21
RPP40-203ENST00000464646 ALAS1P13196 640 aa16.36■□□□□ 0.21
RPP40-203ENST00000464646 SNAP25P60880 206 aa16.36■□□□□ 0.21
RPP40-203ENST00000464646 NOL8Q76FK4 1167 aaKnown RBP16.36■□□□□ 0.21
RPP40-203ENST00000464646 FAM160B2Q86V87 743 aa16.36■□□□□ 0.21
RPP40-203ENST00000464646 DEFB123Q8N688 67 aa16.36■□□□□ 0.21
RPP40-203ENST00000464646 FAM227BQ96M60 508 aa16.36■□□□□ 0.21
RPP40-203ENST00000464646 SLC38A10Q9HBR0 1119 aa16.36■□□□□ 0.21
RPP40-203ENST00000464646 NRBP1Q9UHY1 535 aa16.36■□□□□ 0.21
RPP40-203ENST00000464646 HDAC1Q13547 482 aaPredicted RBP16.35■□□□□ 0.21
RPP40-203ENST00000464646 MCMDC2Q4G0Z9 681 aa16.35■□□□□ 0.21
RPP40-203ENST00000464646 Q7L0L9 218 aa16.35■□□□□ 0.21
RPP40-203ENST00000464646 CHST13Q8NET6 341 aa16.35■□□□□ 0.21
RPP40-203ENST00000464646 SPC25Q9HBM1 224 aa16.35■□□□□ 0.21
RPP40-203ENST00000464646 POTEB2H3BUK9 544 aa16.34■□□□□ 0.21
RPP40-203ENST00000464646 PQBP1O60828 265 aaKnown RBP16.34■□□□□ 0.21
RPP40-203ENST00000464646 IGHA2P01877 340 aa16.34■□□□□ 0.21
RPP40-203ENST00000464646 ZNF865P0CJ78 1059 aaPredicted RBP16.34■□□□□ 0.21
RPP40-203ENST00000464646 FDX1P10109 184 aa16.34■□□□□ 0.21
RPP40-203ENST00000464646 HAND2P61296 217 aa16.34■□□□□ 0.21
RPP40-203ENST00000464646 NMIQ13287 307 aaPredicted RBP16.34■□□□□ 0.21
RPP40-203ENST00000464646 STAG1Q8WVM7 1258 aa16.34■□□□□ 0.21
RPP40-203ENST00000464646 AGBL1Q96MI9 1066 aa16.34■□□□□ 0.21
RPP40-203ENST00000464646 ACAD9Q9H845 621 aa16.34■□□□□ 0.21
RPP40-203ENST00000464646 RNF146Q9NTX7 359 aa16.34■□□□□ 0.21
RPP40-203ENST00000464646 SYNPO2Q9UMS6 1093 aa16.34■□□□□ 0.21
RPP40-203ENST00000464646 MCM3APO60318 1980 aa16.34■□□□□ 0.21
RPP40-203ENST00000464646 PLIN4Q96Q06 1357 aa16.34■□□□□ 0.21
RPP40-203ENST00000464646 A0A0D9SFI3 127 aa16.33■□□□□ 0.2
RPP40-203ENST00000464646 ATP2A1O14983 1001 aa16.33■□□□□ 0.2
RPP40-203ENST00000464646 SNAI1O95863 264 aaPredicted RBP16.33■□□□□ 0.2
RPP40-203ENST00000464646 C6orf222P0C671 652 aaPredicted RBP16.33■□□□□ 0.2
RPP40-203ENST00000464646 OAZ1P54368 228 aa16.33■□□□□ 0.2
RPP40-203ENST00000464646 ACVR2BQ13705 512 aa16.33■□□□□ 0.2
RPP40-203ENST00000464646 LRIT3Q3SXY7 679 aa16.33■□□□□ 0.2
RPP40-203ENST00000464646 RCSD1Q6JBY9 416 aa16.33■□□□□ 0.2
RPP40-203ENST00000464646 MSL3Q8N5Y2 521 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms