RNA–Protein interactions for RNA: ENST00000464547.5

ATF3-207, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-207ENST00000464547 KCNA3P22001 575 aa11.21□□□□□ -0.61
ATF3-207ENST00000464547 SARSP49591 514 aaKnown RBP11.21□□□□□ -0.61
ATF3-207ENST00000464547 NAPAP54920 295 aa11.21□□□□□ -0.61
ATF3-207ENST00000464547 ZNF543Q08ER8 600 aa11.21□□□□□ -0.61
ATF3-207ENST00000464547 CFAP100Q494V2 611 aa11.21□□□□□ -0.61
ATF3-207ENST00000464547 KANK3Q6NY19 840 aa11.21□□□□□ -0.61
ATF3-207ENST00000464547 HOMER1Q86YM7 354 aa11.21□□□□□ -0.61
ATF3-207ENST00000464547 DRC7Q8IY82 874 aa11.21□□□□□ -0.61
ATF3-207ENST00000464547 RTKN2Q8IZC4 609 aa11.21□□□□□ -0.61
ATF3-207ENST00000464547 PDILTQ8N807 584 aa11.21□□□□□ -0.61
ATF3-207ENST00000464547 CCDC12Q8WUD4 166 aaPredicted RBP11.21□□□□□ -0.61
ATF3-207ENST00000464547 DHX58Q96C10 678 aa11.21□□□□□ -0.61
ATF3-207ENST00000464547 MRFAP1L1Q96HT8 127 aa11.21□□□□□ -0.61
ATF3-207ENST00000464547 ZMYND12Q9H0C1 365 aa11.21□□□□□ -0.61
ATF3-207ENST00000464547 KCNF1Q9H3M0 494 aa11.21□□□□□ -0.61
ATF3-207ENST00000464547 C6orf50Q9HD87 102 aa11.21□□□□□ -0.61
ATF3-207ENST00000464547 GPCPD1Q9NPB8 672 aa11.21□□□□□ -0.61
ATF3-207ENST00000464547 PI4KBQ9UBF8 816 aa11.21□□□□□ -0.61
ATF3-207ENST00000464547 GREB1LQ9C091 1923 aaPredicted RBP11.21□□□□□ -0.62
ATF3-207ENST00000464547 SIPA1L1O43166 1804 aa11.21□□□□□ -0.62
ATF3-207ENST00000464547 ESYT2A0FGR8 921 aa11.2□□□□□ -0.62
ATF3-207ENST00000464547 SMCO2A6NFE2 343 aa11.2□□□□□ -0.62
ATF3-207ENST00000464547 FAM196BA6NMK8 535 aa11.2□□□□□ -0.62
ATF3-207ENST00000464547 PTGS1P23219 599 aa11.2□□□□□ -0.62
ATF3-207ENST00000464547 PPP4R3BQ5MIZ7 849 aa11.2□□□□□ -0.62
ATF3-207ENST00000464547 NT5DC1Q5TFE4 455 aa11.2□□□□□ -0.62
ATF3-207ENST00000464547 ARL6IP4Q66PJ3 421 aaKnown RBP11.2□□□□□ -0.62
ATF3-207ENST00000464547 KRT25Q7Z3Z0 450 aa11.2□□□□□ -0.62
ATF3-207ENST00000464547 SH3RF1Q7Z6J0 888 aa11.2□□□□□ -0.62
ATF3-207ENST00000464547 GRAMD1CQ8IYS0 662 aa11.2□□□□□ -0.62
ATF3-207ENST00000464547 SLC16A10Q8TF71 515 aa11.2□□□□□ -0.62
ATF3-207ENST00000464547 SMARCE1Q969G3 411 aa11.2□□□□□ -0.62
ATF3-207ENST00000464547 PRMT6Q96LA8 375 aaPredicted RBP11.2□□□□□ -0.62
ATF3-207ENST00000464547 PSMD1Q99460 953 aa11.2□□□□□ -0.62
ATF3-207ENST00000464547 TDRD3Q9H7E2 651 aaKnown RBP11.2□□□□□ -0.62
ATF3-207ENST00000464547 SEC63Q9UGP8 760 aaKnown RBP11.2□□□□□ -0.62
ATF3-207ENST00000464547 NRBP1Q9UHY1 535 aa11.2□□□□□ -0.62
ATF3-207ENST00000464547 BAZ2BQ9UIF8 2168 aaKnown RBP11.19□□□□□ -0.62
ATF3-207ENST00000464547 hCG_1984214I3L0E3 225 aa11.19□□□□□ -0.62
ATF3-207ENST00000464547 IKBKBO14920 756 aa11.19□□□□□ -0.62
ATF3-207ENST00000464547 ENTPD3O75355 529 aa11.19□□□□□ -0.62
ATF3-207ENST00000464547 OFD1O75665 1012 aa11.19□□□□□ -0.62
ATF3-207ENST00000464547 SLFN14P0C7P3 912 aa11.19□□□□□ -0.62
ATF3-207ENST00000464547 BMP6P22004 513 aa11.19□□□□□ -0.62
ATF3-207ENST00000464547 GNA11P29992 359 aa11.19□□□□□ -0.62
ATF3-207ENST00000464547 TPM4P67936 248 aa11.19□□□□□ -0.62
ATF3-207ENST00000464547 ATP2B2Q01814 1243 aa11.19□□□□□ -0.62
ATF3-207ENST00000464547 MORC3Q14149 939 aa11.19□□□□□ -0.62
ATF3-207ENST00000464547 INF2Q27J81 1249 aa11.19□□□□□ -0.62
ATF3-207ENST00000464547 CERKLQ49MI3 558 aaPredicted RBP11.19□□□□□ -0.62
ATF3-207ENST00000464547 SOGA3Q5TF21 947 aa11.19□□□□□ -0.62
ATF3-207ENST00000464547 TTBK2Q6IQ55 1244 aa11.19□□□□□ -0.62
ATF3-207ENST00000464547 TATDN1Q6P1N9 297 aa11.19□□□□□ -0.62
ATF3-207ENST00000464547 RSBN1LQ6PCB5 846 aaPredicted RBP11.19□□□□□ -0.62
ATF3-207ENST00000464547 CCDC186Q7Z3E2 898 aa11.19□□□□□ -0.62
ATF3-207ENST00000464547 ZSCAN29Q8IWY8 852 aaPredicted RBP11.19□□□□□ -0.62
ATF3-207ENST00000464547 ZNF713Q8N859 430 aaPredicted RBP11.19□□□□□ -0.62
ATF3-207ENST00000464547 PAGE5Q96GU1 130 aa11.19□□□□□ -0.62
ATF3-207ENST00000464547 JMJD4Q9H9V9 463 aa11.19□□□□□ -0.62
ATF3-207ENST00000464547 MYH8P13535 1937 aa11.19□□□□□ -0.62
ATF3-207ENST00000464547 ATRNL1Q5VV63 1379 aa11.18□□□□□ -0.62
ATF3-207ENST00000464547 SMC2O95347 1197 aa11.18□□□□□ -0.62
ATF3-207ENST00000464547 VIL1P09327 827 aaKnown RBP11.18□□□□□ -0.62
ATF3-207ENST00000464547 LONP1P36776 959 aaKnown RBP11.18□□□□□ -0.62
ATF3-207ENST00000464547 NONOQ15233 471 aaKnown RBP eCLIP11.18□□□□□ -0.62
ATF3-207ENST00000464547 E2F4Q16254 413 aa11.18□□□□□ -0.62
ATF3-207ENST00000464547 CCDC96Q2M329 555 aa11.18□□□□□ -0.62
ATF3-207ENST00000464547 SHROOM1Q2M3G4 852 aaPredicted RBP11.18□□□□□ -0.62
ATF3-207ENST00000464547 CCDC144BQ3MJ40 725 aa11.18□□□□□ -0.62
ATF3-207ENST00000464547 SIAH1Q8IUQ4 282 aa11.18□□□□□ -0.62
ATF3-207ENST00000464547 LARGE2Q8N3Y3 721 aa11.18□□□□□ -0.62
ATF3-207ENST00000464547 TRIML1Q8N9V2 468 aa11.18□□□□□ -0.62
ATF3-207ENST00000464547 SPATA20Q8TB22 786 aa11.18□□□□□ -0.62
ATF3-207ENST00000464547 MKL1Q969V6 931 aa11.18□□□□□ -0.62
ATF3-207ENST00000464547 GMLQ99445 158 aa11.18□□□□□ -0.62
ATF3-207ENST00000464547 TRIM34Q9BYJ4 488 aa11.18□□□□□ -0.62
ATF3-207ENST00000464547 HSD3B7Q9H2F3 369 aa11.18□□□□□ -0.62
ATF3-207ENST00000464547 TMEM60Q9H2L4 133 aa11.18□□□□□ -0.62
ATF3-207ENST00000464547 ZNF277Q9NRM2 450 aaPredicted RBP11.18□□□□□ -0.62
ATF3-207ENST00000464547 NYAP2Q9P242 653 aa11.18□□□□□ -0.62
ATF3-207ENST00000464547 PYCARDQ9ULZ3 195 aa11.18□□□□□ -0.62
ATF3-207ENST00000464547 COL2A1P02458 1487 aaPredicted RBP11.18□□□□□ -0.62
ATF3-207ENST00000464547 COL4A5P29400 1685 aa11.17□□□□□ -0.62
ATF3-207ENST00000464547 PNMA6FA0A0J9YX94 578 aa11.17□□□□□ -0.62
ATF3-207ENST00000464547 PSMD14O00487 310 aa11.17□□□□□ -0.62
ATF3-207ENST00000464547 RAD17O75943 681 aa11.17□□□□□ -0.62
ATF3-207ENST00000464547 EEF2P13639 858 aaKnown RBP11.17□□□□□ -0.62
ATF3-207ENST00000464547 AFMP43652 599 aa11.17□□□□□ -0.62
ATF3-207ENST00000464547 MYL5Q02045 173 aa11.17□□□□□ -0.62
ATF3-207ENST00000464547 DPYDQ12882 1025 aa11.17□□□□□ -0.62
ATF3-207ENST00000464547 JAKMIP3Q5VZ66 844 aa11.17□□□□□ -0.62
ATF3-207ENST00000464547 PPP1R18Q6NYC8 613 aa11.17□□□□□ -0.62
ATF3-207ENST00000464547 PDXDC2PQ6P474 469 aa11.17□□□□□ -0.62
ATF3-207ENST00000464547 ADGRF4Q8IZF3 695 aa11.17□□□□□ -0.62
ATF3-207ENST00000464547 MLKLQ8NB16 471 aa11.17□□□□□ -0.62
ATF3-207ENST00000464547 FBXO41Q8TF61 875 aa11.17□□□□□ -0.62
ATF3-207ENST00000464547 DCAF4Q8WV16 495 aa11.17□□□□□ -0.62
ATF3-207ENST00000464547 COA7Q96BR5 231 aa11.17□□□□□ -0.62
ATF3-207ENST00000464547 MTMR8Q96EF0 704 aa11.17□□□□□ -0.62
ATF3-207ENST00000464547 CCDC34Q96HJ3 373 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms