RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 MPHOSPH10O00566 681 aaKnown RBP24.77■■□□□ 1.56
PDLIM2-216ENST00000464275 ENTPD3O75355 529 aa24.77■■□□□ 1.56
PDLIM2-216ENST00000464275 NAPAP54920 295 aa24.77■■□□□ 1.56
PDLIM2-216ENST00000464275 DNAJC18Q9H819 358 aa24.77■■□□□ 1.56
PDLIM2-216ENST00000464275 SERTAD1Q9UHV2 236 aa24.77■■□□□ 1.56
PDLIM2-216ENST00000464275 EIF6P56537 245 aaKnown RBP24.76■■□□□ 1.55
PDLIM2-216ENST00000464275 MDM2Q00987 491 aaPredicted RBP24.76■■□□□ 1.55
PDLIM2-216ENST00000464275 AOPEPQ8N6M6 819 aa24.76■■□□□ 1.55
PDLIM2-216ENST00000464275 PIGSQ96S52 555 aa24.76■■□□□ 1.55
PDLIM2-216ENST00000464275 C6orf50Q9HD87 102 aa24.76■■□□□ 1.55
PDLIM2-216ENST00000464275 GNA11P29992 359 aa24.76■■□□□ 1.55
PDLIM2-216ENST00000464275 RSBN1LQ6PCB5 846 aaPredicted RBP24.76■■□□□ 1.55
PDLIM2-216ENST00000464275 SH3BP5LQ7L8J4 393 aa24.76■■□□□ 1.55
PDLIM2-216ENST00000464275 HOMER1Q86YM7 354 aa24.76■■□□□ 1.55
PDLIM2-216ENST00000464275 CLEC10AQ8IUN9 316 aa24.76■■□□□ 1.55
PDLIM2-216ENST00000464275 ZSCAN29Q8IWY8 852 aaPredicted RBP24.76■■□□□ 1.55
PDLIM2-216ENST00000464275 KIAA1524Q8TCG1 905 aa24.76■■□□□ 1.55
PDLIM2-216ENST00000464275 TRIM34Q9BYJ4 488 aa24.76■■□□□ 1.55
PDLIM2-216ENST00000464275 TDRD3Q9H7E2 651 aaKnown RBP24.76■■□□□ 1.55
PDLIM2-216ENST00000464275 VAT1LQ9HCJ6 419 aa24.76■■□□□ 1.55
PDLIM2-216ENST00000464275 FRMPD2Q68DX3 1309 aaPredicted RBP24.76■■□□□ 1.55
PDLIM2-216ENST00000464275 MCM7P33993 719 aa24.75■■□□□ 1.55
PDLIM2-216ENST00000464275 DNTTIP2Q5QJE6 756 aaKnown RBP24.75■■□□□ 1.55
PDLIM2-216ENST00000464275 SOGA3Q5TF21 947 aa24.75■■□□□ 1.55
PDLIM2-216ENST00000464275 ARL6IP4Q66PJ3 421 aaKnown RBP24.75■■□□□ 1.55
PDLIM2-216ENST00000464275 USP49Q70CQ1 688 aa24.75■■□□□ 1.55
PDLIM2-216ENST00000464275 MYRIPQ8NFW9 859 aa24.75■■□□□ 1.55
PDLIM2-216ENST00000464275 RASGRP4Q8TDF6 673 aa24.75■■□□□ 1.55
PDLIM2-216ENST00000464275 CCDC34Q96HJ3 373 aa24.75■■□□□ 1.55
PDLIM2-216ENST00000464275 UBA5Q9GZZ9 404 aa24.75■■□□□ 1.55
PDLIM2-216ENST00000464275 BRCA1P38398 1863 aaKnown RBP24.75■■□□□ 1.55
PDLIM2-216ENST00000464275 ATRNL1Q5VV63 1379 aa24.75■■□□□ 1.55
PDLIM2-216ENST00000464275 ACTN4O43707 911 aaKnown RBP24.74■■□□□ 1.55
PDLIM2-216ENST00000464275 ZNF543Q08ER8 600 aa24.74■■□□□ 1.55
PDLIM2-216ENST00000464275 POSTNQ15063 836 aa24.74■■□□□ 1.55
PDLIM2-216ENST00000464275 LARGE2Q8N3Y3 721 aa24.74■■□□□ 1.55
PDLIM2-216ENST00000464275 ESYT2A0FGR8 921 aa24.74■■□□□ 1.55
PDLIM2-216ENST00000464275 SMCO2A6NFE2 343 aa24.74■■□□□ 1.55
PDLIM2-216ENST00000464275 CDC25BP30305 580 aa24.74■■□□□ 1.55
PDLIM2-216ENST00000464275 CERKLQ49MI3 558 aaPredicted RBP24.74■■□□□ 1.55
PDLIM2-216ENST00000464275 TATDN1Q6P1N9 297 aa24.74■■□□□ 1.55
PDLIM2-216ENST00000464275 SYMPKQ92797 1274 aaKnown RBP24.74■■□□□ 1.55
PDLIM2-216ENST00000464275 PCDHA5Q9Y5H7 936 aa24.74■■□□□ 1.55
PDLIM2-216ENST00000464275 FER1L6Q2WGJ9 1857 aa24.73■■□□□ 1.55
PDLIM2-216ENST00000464275 VWA3AA6NCI4 1184 aa24.73■■□□□ 1.55
PDLIM2-216ENST00000464275 SMTNL1A8MU46 457 aa24.73■■□□□ 1.55
PDLIM2-216ENST00000464275 KRT25Q7Z3Z0 450 aa24.73■■□□□ 1.55
PDLIM2-216ENST00000464275 UBE2Q2Q8WVN8 375 aa24.73■■□□□ 1.55
PDLIM2-216ENST00000464275 EPSTI1Q96J88 318 aa24.73■■□□□ 1.55
PDLIM2-216ENST00000464275 PRMT6Q96LA8 375 aaPredicted RBP24.73■■□□□ 1.55
PDLIM2-216ENST00000464275 VIL1P09327 827 aaKnown RBP24.73■■□□□ 1.55
PDLIM2-216ENST00000464275 GPATCH4Q5T3I0 446 aaKnown RBP24.73■■□□□ 1.55
PDLIM2-216ENST00000464275 PDILTQ8N807 584 aa24.73■■□□□ 1.55
PDLIM2-216ENST00000464275 C4orf32Q8N8J7 132 aa24.73■■□□□ 1.55
PDLIM2-216ENST00000464275 ZNF830Q96NB3 372 aaPredicted RBP24.73■■□□□ 1.55
PDLIM2-216ENST00000464275 GPCPD1Q9NPB8 672 aa24.73■■□□□ 1.55
PDLIM2-216ENST00000464275 NYAP2Q9P242 653 aa24.73■■□□□ 1.55
PDLIM2-216ENST00000464275 HDAC9Q9UKV0 1011 aa24.73■■□□□ 1.55
PDLIM2-216ENST00000464275 COL4A5P29400 1685 aa24.72■■□□□ 1.55
PDLIM2-216ENST00000464275 FOXN1O15353 648 aa24.72■■□□□ 1.55
PDLIM2-216ENST00000464275 GTF2F1P35269 517 aaKnown RBP eCLIP24.72■■□□□ 1.55
PDLIM2-216ENST00000464275 SPC24Q8NBT2 197 aa24.72■■□□□ 1.55
PDLIM2-216ENST00000464275 MKL1Q969V6 931 aa24.72■■□□□ 1.55
PDLIM2-216ENST00000464275 TPM4P67936 248 aa24.71■■□□□ 1.55
PDLIM2-216ENST00000464275 ATP2B2Q01814 1243 aa24.71■■□□□ 1.55
PDLIM2-216ENST00000464275 NT5DC1Q5TFE4 455 aa24.71■■□□□ 1.55
PDLIM2-216ENST00000464275 PYM1Q9BRP8 204 aaKnown RBP24.71■■□□□ 1.55
PDLIM2-216ENST00000464275 KANSL2Q9H9L4 492 aa24.71■■□□□ 1.55
PDLIM2-216ENST00000464275 ZNF277Q9NRM2 450 aaPredicted RBP24.71■■□□□ 1.55
PDLIM2-216ENST00000464275 PSMD14O00487 310 aa24.71■■□□□ 1.55
PDLIM2-216ENST00000464275 IKBKBO14920 756 aa24.71■■□□□ 1.55
PDLIM2-216ENST00000464275 SLURP2P0DP57 97 aa24.71■■□□□ 1.55
PDLIM2-216ENST00000464275 TGFB2P61812 414 aa24.71■■□□□ 1.55
PDLIM2-216ENST00000464275 INF2Q27J81 1249 aa24.71■■□□□ 1.55
PDLIM2-216ENST00000464275 ISM2Q6H9L7 571 aa24.71■■□□□ 1.55
PDLIM2-216ENST00000464275 MRFAP1L1Q96HT8 127 aa24.71■■□□□ 1.55
PDLIM2-216ENST00000464275 GMLQ99445 158 aa24.71■■□□□ 1.55
PDLIM2-216ENST00000464275 TMOD2Q9NZR1 351 aa24.71■■□□□ 1.55
PDLIM2-216ENST00000464275 FAM196BA6NMK8 535 aa24.7■■□□□ 1.54
PDLIM2-216ENST00000464275 SLFN14P0C7P3 912 aa24.7■■□□□ 1.54
PDLIM2-216ENST00000464275 LONP1P36776 959 aaKnown RBP24.7■■□□□ 1.54
PDLIM2-216ENST00000464275 SMARCE1Q969G3 411 aa24.7■■□□□ 1.54
PDLIM2-216ENST00000464275 DHX58Q96C10 678 aa24.7■■□□□ 1.54
PDLIM2-216ENST00000464275 KCNF1Q9H3M0 494 aa24.7■■□□□ 1.54
PDLIM2-216ENST00000464275 A0A087X0B3 334 aa24.69■■□□□ 1.54
PDLIM2-216ENST00000464275 RAD17O75943 681 aa24.69■■□□□ 1.54
PDLIM2-216ENST00000464275 SARSP49591 514 aaKnown RBP24.69■■□□□ 1.54
PDLIM2-216ENST00000464275 NONOQ15233 471 aaKnown RBP eCLIP24.69■■□□□ 1.54
PDLIM2-216ENST00000464275 TMEM179Q6ZVK1 233 aa24.69■■□□□ 1.54
PDLIM2-216ENST00000464275 DRC7Q8IY82 874 aa24.69■■□□□ 1.54
PDLIM2-216ENST00000464275 TRIML1Q8N9V2 468 aa24.69■■□□□ 1.54
PDLIM2-216ENST00000464275 PIM2Q9P1W9 311 aa24.69■■□□□ 1.54
PDLIM2-216ENST00000464275 PNMA6FA0A0J9YX94 578 aa24.69■■□□□ 1.54
PDLIM2-216ENST00000464275 LAD1O00515 517 aa24.69■■□□□ 1.54
PDLIM2-216ENST00000464275 PRR29P0C7W0 189 aa24.69■■□□□ 1.54
PDLIM2-216ENST00000464275 IL17AQ16552 155 aa24.69■■□□□ 1.54
PDLIM2-216ENST00000464275 CCDC96Q2M329 555 aa24.69■■□□□ 1.54
PDLIM2-216ENST00000464275 PPP1R18Q6NYC8 613 aa24.69■■□□□ 1.54
PDLIM2-216ENST00000464275 CCDC125Q86Z20 511 aa24.69■■□□□ 1.54
PDLIM2-216ENST00000464275 ADGRF4Q8IZF3 695 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms