RNA–Protein interactions for RNA: ENST00000464256.1

PAXBP1-206, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-206ENST00000464256 TMEM87BQ96K49 555 aa29.68■■■□□ 2.34
PAXBP1-206ENST00000464256 RXRAP19793 462 aa29.67■■■□□ 2.34
PAXBP1-206ENST00000464256 PLS1Q14651 629 aa29.67■■■□□ 2.34
PAXBP1-206ENST00000464256 UPF3BQ9BZI7 483 aaKnown RBP29.67■■■□□ 2.34
PAXBP1-206ENST00000464256 UBA5Q9GZZ9 404 aa29.67■■■□□ 2.34
PAXBP1-206ENST00000464256 PRR12Q9ULL5 1215 aa29.67■■■□□ 2.34
PAXBP1-206ENST00000464256 TRIM17Q9Y577 477 aa29.67■■■□□ 2.34
PAXBP1-206ENST00000464256 ZNFX1Q9P2E3 1918 aaKnown RBP29.67■■■□□ 2.34
PAXBP1-206ENST00000464256 TROAPQ12815 778 aa29.66■■■□□ 2.34
PAXBP1-206ENST00000464256 ZNF214Q9UL59 606 aaPredicted RBP29.66■■■□□ 2.34
PAXBP1-206ENST00000464256 BLOC1S2Q6QNY1 142 aa29.66■■■□□ 2.34
PAXBP1-206ENST00000464256 GTF3C2Q8WUA4 911 aaPredicted RBP29.66■■■□□ 2.34
PAXBP1-206ENST00000464256 MOV10L1Q9BXT6 1211 aaKnown RBP29.66■■■□□ 2.34
PAXBP1-206ENST00000464256 SPATC1LQ9H0A9 340 aa29.66■■■□□ 2.34
PAXBP1-206ENST00000464256 FMNL1O95466 1100 aaPredicted RBP29.65■■■□□ 2.34
PAXBP1-206ENST00000464256 RPS6KB1P23443 525 aa29.65■■■□□ 2.34
PAXBP1-206ENST00000464256 ZNF654Q8IZM8 581 aa29.65■■■□□ 2.34
PAXBP1-206ENST00000464256 SLC38A10Q9HBR0 1119 aa29.65■■■□□ 2.34
PAXBP1-206ENST00000464256 MAD2L2Q9UI95 211 aa29.65■■■□□ 2.34
PAXBP1-206ENST00000464256 SLC35G1Q2M3R5 365 aa29.64■■■□□ 2.34
PAXBP1-206ENST00000464256 CPXCR1Q8N123 301 aa29.64■■■□□ 2.34
PAXBP1-206ENST00000464256 RAVER2Q9HCJ3 691 aaKnown RBP29.64■■■□□ 2.34
PAXBP1-206ENST00000464256 BRPF3Q9ULD4 1205 aa29.64■■■□□ 2.34
PAXBP1-206ENST00000464256 GABRQQ9UN88 632 aa29.64■■■□□ 2.34
PAXBP1-206ENST00000464256 LIFRP42702 1097 aa29.63■■■□□ 2.33
PAXBP1-206ENST00000464256 SYDE2Q5VT97 1194 aa29.63■■■□□ 2.33
PAXBP1-206ENST00000464256 BTNL9Q6UXG8 535 aa29.63■■■□□ 2.33
PAXBP1-206ENST00000464256 NFXL1Q6ZNB6 911 aa29.63■■■□□ 2.33
PAXBP1-206ENST00000464256 Q6ZUG5 572 aa29.63■■■□□ 2.33
PAXBP1-206ENST00000464256 CTU1Q7Z7A3 348 aaKnown RBP29.63■■■□□ 2.33
PAXBP1-206ENST00000464256 FAM160B2Q86V87 743 aa29.63■■■□□ 2.33
PAXBP1-206ENST00000464256 CHURC1Q8WUH1 139 aa29.63■■■□□ 2.33
PAXBP1-206ENST00000464256 NUP133Q8WUM0 1156 aa29.63■■■□□ 2.33
PAXBP1-206ENST00000464256 MTA3Q9BTC8 594 aa29.63■■■□□ 2.33
PAXBP1-206ENST00000464256 ZSWIM6Q9HCJ5 1215 aa29.63■■■□□ 2.33
PAXBP1-206ENST00000464256 RIPK3Q9Y572 518 aa29.63■■■□□ 2.33
PAXBP1-206ENST00000464256 WDR19Q8NEZ3 1342 aa29.63■■■□□ 2.33
PAXBP1-206ENST00000464256 PLA2G6O60733 806 aa29.63■■■□□ 2.33
PAXBP1-206ENST00000464256 PARP1P09874 1014 aaKnown RBP29.63■■■□□ 2.33
PAXBP1-206ENST00000464256 KIF22Q14807 665 aa29.63■■■□□ 2.33
PAXBP1-206ENST00000464256 CCDC144CPQ8IYA2 1237 aa29.63■■■□□ 2.33
PAXBP1-206ENST00000464256 MB21D1Q8N884 522 aa29.63■■■□□ 2.33
PAXBP1-206ENST00000464256 ZNF536O15090 1300 aa29.62■■■□□ 2.33
PAXBP1-206ENST00000464256 TNPO2O14787 897 aaKnown RBP29.62■■■□□ 2.33
PAXBP1-206ENST00000464256 SLC4A3P48751 1232 aa29.62■■■□□ 2.33
PAXBP1-206ENST00000464256 GRM4Q14833 912 aa29.62■■■□□ 2.33
PAXBP1-206ENST00000464256 CCDC174Q6PII3 467 aa29.62■■■□□ 2.33
PAXBP1-206ENST00000464256 CCDC69A6NI79 296 aa29.61■■■□□ 2.33
PAXBP1-206ENST00000464256 HMGB1P09429 215 aaKnown RBP29.61■■■□□ 2.33
PAXBP1-206ENST00000464256 FCGRTP55899 365 aa29.61■■■□□ 2.33
PAXBP1-206ENST00000464256 RUFY3Q7L099 469 aa29.61■■■□□ 2.33
PAXBP1-206ENST00000464256 CATIPQ7Z7H3 387 aa29.61■■■□□ 2.33
PAXBP1-206ENST00000464256 NBPF11Q86T75 865 aa29.61■■■□□ 2.33
PAXBP1-206ENST00000464256 ERCC3P19447 782 aa29.6■■■□□ 2.33
PAXBP1-206ENST00000464256 PRKCZQ05513 592 aa29.6■■■□□ 2.33
PAXBP1-206ENST00000464256 ASPRV1Q53RT3 343 aa29.6■■■□□ 2.33
PAXBP1-206ENST00000464256 GPATCH4Q5T3I0 446 aaKnown RBP29.6■■■□□ 2.33
PAXBP1-206ENST00000464256 WDR78Q5VTH9 848 aa29.6■■■□□ 2.33
PAXBP1-206ENST00000464256 SGMS1Q86VZ5 419 aa29.6■■■□□ 2.33
PAXBP1-206ENST00000464256 AGBL1Q96MI9 1066 aa29.6■■■□□ 2.33
PAXBP1-206ENST00000464256 LARP6Q9BRS8 491 aaKnown RBP29.6■■■□□ 2.33
PAXBP1-206ENST00000464256 PALM3A6NDB9 673 aaPredicted RBP29.6■■■□□ 2.33
PAXBP1-206ENST00000464256 PSMA5P28066 241 aa29.6■■■□□ 2.33
PAXBP1-206ENST00000464256 APOBRQ0VD83 1088 aa29.6■■■□□ 2.33
PAXBP1-206ENST00000464256 SNRNP48Q6IEG0 339 aaKnown RBP29.6■■■□□ 2.33
PAXBP1-206ENST00000464256 GPR142Q7Z601 462 aa29.6■■■□□ 2.33
PAXBP1-206ENST00000464256 BRF1Q92994 677 aa29.6■■■□□ 2.33
PAXBP1-206ENST00000464256 MCOLN1Q9GZU1 580 aa29.6■■■□□ 2.33
PAXBP1-206ENST00000464256 ZBED4O75132 1171 aa29.59■■■□□ 2.33
PAXBP1-206ENST00000464256 STAT3P40763 770 aa29.59■■■□□ 2.33
PAXBP1-206ENST00000464256 MICU3Q86XE3 530 aa29.59■■■□□ 2.33
PAXBP1-206ENST00000464256 KLRF2D3W0D1 207 aa29.58■■■□□ 2.33
PAXBP1-206ENST00000464256 APOA5Q6Q788 366 aa29.58■■■□□ 2.33
PAXBP1-206ENST00000464256 NCAPG2Q86XI2 1143 aa29.58■■■□□ 2.33
PAXBP1-206ENST00000464256 ADGRF4Q8IZF3 695 aa29.58■■■□□ 2.33
PAXBP1-206ENST00000464256 CMTR1Q8N1G2 835 aaKnown RBP29.58■■■□□ 2.33
PAXBP1-206ENST00000464256 TM6SF1Q9BZW5 370 aa29.58■■■□□ 2.33
PAXBP1-206ENST00000464256 RANBP17Q9H2T7 1088 aaKnown RBP29.58■■■□□ 2.33
PAXBP1-206ENST00000464256 VAT1LQ9HCJ6 419 aa29.58■■■□□ 2.33
PAXBP1-206ENST00000464256 TOB2Q14106 344 aaPredicted RBP29.57■■■□□ 2.32
PAXBP1-206ENST00000464256 SRRDQ9UH36 339 aa29.57■■■□□ 2.32
PAXBP1-206ENST00000464256 SLC12A7Q9Y666 1083 aa29.57■■■□□ 2.32
PAXBP1-206ENST00000464256 PTCH2Q9Y6C5 1203 aa29.57■■■□□ 2.32
PAXBP1-206ENST00000464256 KLF18A0A0U1RQI7 1052 aa29.56■■■□□ 2.32
PAXBP1-206ENST00000464256 DDAH1O94760 285 aa29.56■■■□□ 2.32
PAXBP1-206ENST00000464256 ANAPC15P60006 121 aa29.56■■■□□ 2.32
PAXBP1-206ENST00000464256 CCNA1P78396 465 aa29.56■■■□□ 2.32
PAXBP1-206ENST00000464256 RIOX2Q8IUF8 465 aa29.56■■■□□ 2.32
PAXBP1-206ENST00000464256 TMTC2Q8N394 836 aa29.56■■■□□ 2.32
PAXBP1-206ENST00000464256 TEX13BQ9BXU2 312 aa29.56■■■□□ 2.32
PAXBP1-206ENST00000464256 GJD2Q9UKL4 321 aa29.56■■■□□ 2.32
PAXBP1-206ENST00000464256 PTPN22Q9Y2R2 807 aa29.56■■■□□ 2.32
PAXBP1-206ENST00000464256 CYP46A1Q9Y6A2 500 aa29.56■■■□□ 2.32
PAXBP1-206ENST00000464256 PLXNA1Q9UIW2 1896 aa29.56■■■□□ 2.32
PAXBP1-206ENST00000464256 CYTH3O43739 400 aa29.56■■■□□ 2.32
PAXBP1-206ENST00000464256 PLEKHA8P1O95397 391 aa29.56■■■□□ 2.32
PAXBP1-206ENST00000464256 MAPK4P31152 587 aa29.56■■■□□ 2.32
PAXBP1-206ENST00000464256 FLT3LGP49771 235 aa29.56■■■□□ 2.32
PAXBP1-206ENST00000464256 FGD1P98174 961 aa29.56■■■□□ 2.32
PAXBP1-206ENST00000464256 CCAR1Q8IX12 1150 aaKnown RBP29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms