RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 ACEP12821 1306 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 USP31Q70CQ4 1352 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 RIC1Q4ADV7 1423 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 UNCXA6NJT0 531 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 M0R2C6 588 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 NDUFAB1O14561 156 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 BUB1BO60566 1050 aaPredicted RBP4.07□□□□□ -1.76
COL8A1-205ENST00000463753 ATP2C2O75185 946 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 SMIM24O75264 130 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 ZSCAN22P10073 491 aaPredicted RBP4.07□□□□□ -1.76
COL8A1-205ENST00000463753 CNGA1P29973 690 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 IQCB1Q15051 598 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 FILIP1LQ4L180 1135 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 C16orf87Q6PH81 154 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 CDC37L1Q7L3B6 337 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 PNMA8AQ86V59 439 aaPredicted RBP4.07□□□□□ -1.76
COL8A1-205ENST00000463753 AMOTL1Q8IY63 956 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 TRMT44Q8IYL2 757 aaKnown RBP4.07□□□□□ -1.76
COL8A1-205ENST00000463753 IGSF22Q8N9C0 903 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 OR8K1Q8NGG5 319 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 TDRD7Q8NHU6 1098 aaKnown RBP4.07□□□□□ -1.76
COL8A1-205ENST00000463753 ZCRB1Q8TBF4 217 aaKnown RBP4.07□□□□□ -1.76
COL8A1-205ENST00000463753 BICD2Q8TD16 824 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 LRRN4Q8WUT4 740 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 C17orf50Q8WW18 174 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 TSR2Q969E8 191 aaKnown RBP4.07□□□□□ -1.76
COL8A1-205ENST00000463753 RBM17Q96I25 401 aaKnown RBP4.07□□□□□ -1.76
COL8A1-205ENST00000463753 TSC22D3Q99576 134 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 MMTAG2Q9BU76 263 aaKnown RBP4.07□□□□□ -1.76
COL8A1-205ENST00000463753 SLC40A1Q9NP59 571 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 PAPOLBQ9NRJ5 636 aaKnown RBP4.07□□□□□ -1.76
COL8A1-205ENST00000463753 TMOD4Q9NZQ9 345 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 TTC41PQ6P2S7 1318 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 FAM205AQ6ZU69 1335 aa4.07□□□□□ -1.76
COL8A1-205ENST00000463753 FANCGO15287 622 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 MYO1BO43795 1136 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 WDHD1O75717 1129 aaPredicted RBP4.06□□□□□ -1.76
COL8A1-205ENST00000463753 U2AF1L5P0DN76 240 aaPredicted RBP4.06□□□□□ -1.76
COL8A1-205ENST00000463753 ZNF24P17028 368 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 SLC19A1P41440 591 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 USP5P45974 858 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 FNTAP49354 379 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 GNGT1P63211 74 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 U2AF1Q01081 240 aaKnown RBP eCLIP4.06□□□□□ -1.76
COL8A1-205ENST00000463753 SLC7A5Q01650 507 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 MYO1EQ12965 1108 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 PRPF4BQ13523 1007 aaKnown RBP4.06□□□□□ -1.76
COL8A1-205ENST00000463753 BRD3Q15059 726 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 BEND6Q5SZJ8 279 aaPredicted RBP4.06□□□□□ -1.76
COL8A1-205ENST00000463753 SFMBT2Q5VUG0 894 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 RCSD1Q6JBY9 416 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 TMEM87AQ8NBN3 555 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 NLGN2Q8NFZ4 835 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 RABGGTAQ92696 567 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 PRAM1Q96QH2 718 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 LRRCC1Q9C099 1032 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 ATP6V0A4Q9HBG4 840 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 SNRKQ9NRH2 765 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 FKBPLQ9UIM3 349 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 NOB1Q9ULX3 412 aaKnown RBP4.06□□□□□ -1.76
COL8A1-205ENST00000463753 NDUFB9Q9Y6M9 179 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 PHLPP2Q6ZVD8 1323 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 A6NJR5 290 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 LRRIQ3A6PVS8 624 aaPredicted RBP4.06□□□□□ -1.76
COL8A1-205ENST00000463753 WNT7AO00755 349 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 ZSCAN12O43309 604 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 EPB41L2O43491 1005 aaKnown RBP4.06□□□□□ -1.76
COL8A1-205ENST00000463753 STX6O43752 255 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 ZNF202O95125 648 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 CDC25BP30305 580 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 GJA8P48165 433 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 IRAK1P51617 712 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 SLC8A3P57103 927 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 CHMP4BP1P59074 171 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 PPARDQ03181 441 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 DDB1Q16531 1140 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 SPTY2D1Q68D10 685 aaPredicted RBP4.06□□□□□ -1.76
COL8A1-205ENST00000463753 CWF19L1Q69YN2 538 aaKnown RBP4.06□□□□□ -1.76
COL8A1-205ENST00000463753 GALNT17Q6IS24 598 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 ZNF280DQ6N043 979 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 FAM173BQ6P4H8 233 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 BZW1Q7L1Q6 419 aaKnown RBP4.06□□□□□ -1.76
COL8A1-205ENST00000463753 FERMT3Q86UX7 667 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 FAM114A1Q8IWE2 563 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 FAM76AQ8TAV0 307 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 NSMCE1Q8WV22 266 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 DHX58Q96C10 678 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 SPAG5Q96R06 1193 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 PNKPQ96T60 521 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 OCSTAMPQ9BR26 566 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 FAM167BQ9BTA0 163 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 POLD4Q9HCU8 107 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 HOMER3Q9NSC5 361 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 DNAAF2Q9NVR5 837 aaKnown RBP4.06□□□□□ -1.76
COL8A1-205ENST00000463753 UBAP1Q9NZ09 502 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 MYO1AQ9UBC5 1043 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 HDAC6Q9UBN7 1215 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 TPX2Q9ULW0 747 aaKnown RBP4.06□□□□□ -1.76
COL8A1-205ENST00000463753 PCDHGC5Q9Y5F6 944 aa4.06□□□□□ -1.76
COL8A1-205ENST00000463753 KIF24Q5T7B8 1368 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms