RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 MAMDC4Q6UXC1 1216 aa20.74■□□□□ 0.91
HMGN1-209ENST00000463631 RNPC3Q96LT9 517 aaKnown RBP20.74■□□□□ 0.91
HMGN1-209ENST00000463631 CHMP4BQ9H444 224 aaKnown RBP20.74■□□□□ 0.91
HMGN1-209ENST00000463631 SYNRGQ9UMZ2 1314 aa20.74■□□□□ 0.91
HMGN1-209ENST00000463631 DNAJC25-GNG10A0A024R161 153 aa20.73■□□□□ 0.91
HMGN1-209ENST00000463631 MOXD2PA6NHM9 499 aa20.73■□□□□ 0.91
HMGN1-209ENST00000463631 PQBP1O60828 265 aaKnown RBP20.73■□□□□ 0.91
HMGN1-209ENST00000463631 RAG1P15918 1043 aa20.73■□□□□ 0.91
HMGN1-209ENST00000463631 RASA1P20936 1047 aa20.73■□□□□ 0.91
HMGN1-209ENST00000463631 ACLYP53396 1101 aa20.73■□□□□ 0.91
HMGN1-209ENST00000463631 FPGSQ05932 587 aa20.73■□□□□ 0.91
HMGN1-209ENST00000463631 GIMAP6Q6P9H5 292 aa20.73■□□□□ 0.91
HMGN1-209ENST00000463631 ZNF467Q7Z7K2 595 aaPredicted RBP20.73■□□□□ 0.91
HMGN1-209ENST00000463631 LENG1Q96BZ8 264 aaPredicted RBP20.73■□□□□ 0.91
HMGN1-209ENST00000463631 NYAP2Q9P242 653 aa20.73■□□□□ 0.91
HMGN1-209ENST00000463631 COG6Q9Y2V7 657 aa20.73■□□□□ 0.91
HMGN1-209ENST00000463631 MYH4Q9Y623 1939 aa20.72■□□□□ 0.91
HMGN1-209ENST00000463631 CST5P28325 142 aaPredicted RBP20.72■□□□□ 0.91
HMGN1-209ENST00000463631 FAAP100Q0VG06 881 aa20.72■□□□□ 0.91
HMGN1-209ENST00000463631 SNRNP48Q6IEG0 339 aaKnown RBP20.72■□□□□ 0.91
HMGN1-209ENST00000463631 CCSAPQ6IQ19 270 aaPredicted RBP20.72■□□□□ 0.91
HMGN1-209ENST00000463631 KLHDC9Q8NEP7 349 aa20.72■□□□□ 0.91
HMGN1-209ENST00000463631 NUP133Q8WUM0 1156 aa20.72■□□□□ 0.91
HMGN1-209ENST00000463631 MYLIPQ8WY64 445 aa20.72■□□□□ 0.91
HMGN1-209ENST00000463631 TMEM39AQ9NV64 488 aa20.72■□□□□ 0.91
HMGN1-209ENST00000463631 SNAI1O95863 264 aaPredicted RBP20.71■□□□□ 0.91
HMGN1-209ENST00000463631 FOSL2P15408 326 aa20.71■□□□□ 0.91
HMGN1-209ENST00000463631 PRPF38AQ8NAV1 312 aaKnown RBP20.71■□□□□ 0.91
HMGN1-209ENST00000463631 STRBPQ96SI9 672 aaKnown RBP20.71■□□□□ 0.91
HMGN1-209ENST00000463631 NUP88Q99567 741 aaPredicted RBP20.71■□□□□ 0.91
HMGN1-209ENST00000463631 BCL11AQ9H165 835 aa20.71■□□□□ 0.91
HMGN1-209ENST00000463631 STARD7Q9NQZ5 370 aa20.71■□□□□ 0.91
HMGN1-209ENST00000463631 TBX21Q9UL17 535 aa20.71■□□□□ 0.91
HMGN1-209ENST00000463631 FAM184BQ9ULE4 1060 aa20.71■□□□□ 0.91
HMGN1-209ENST00000463631 SYNPO2Q9UMS6 1093 aa20.71■□□□□ 0.91
HMGN1-209ENST00000463631 CHD9Q3L8U1 2897 aa20.7■□□□□ 0.9
HMGN1-209ENST00000463631 GSG1L2A8MUP6 293 aa20.7■□□□□ 0.9
HMGN1-209ENST00000463631 DCDC2CA8MYV0 355 aa20.7■□□□□ 0.9
HMGN1-209ENST00000463631 F5H6K3 240 aa20.7■□□□□ 0.9
HMGN1-209ENST00000463631 RAD21O60216 631 aa20.7■□□□□ 0.9
HMGN1-209ENST00000463631 DUSP11O75319 330 aaKnown RBP20.7■□□□□ 0.9
HMGN1-209ENST00000463631 NDUFB10O96000 172 aa20.7■□□□□ 0.9
HMGN1-209ENST00000463631 KLRC3Q07444 240 aa20.7■□□□□ 0.9
HMGN1-209ENST00000463631 LRRCC1Q9C099 1032 aa20.7■□□□□ 0.9
HMGN1-209ENST00000463631 RIPK3Q9Y572 518 aa20.7■□□□□ 0.9
HMGN1-209ENST00000463631 MCM3APO60318 1980 aa20.7■□□□□ 0.9
HMGN1-209ENST00000463631 IGKV6D-41A0A0C4DH26 115 aa20.69■□□□□ 0.9
HMGN1-209ENST00000463631 DDX11Q96FC9 970 aa20.69■□□□□ 0.9
HMGN1-209ENST00000463631 ELP1O95163 1332 aa20.69■□□□□ 0.9
HMGN1-209ENST00000463631 MROH7Q68CQ1 1323 aa20.69■□□□□ 0.9
HMGN1-209ENST00000463631 TIMP1P01033 207 aa20.68■□□□□ 0.9
HMGN1-209ENST00000463631 KBTBD3Q8NAB2 608 aa20.68■□□□□ 0.9
HMGN1-209ENST00000463631 UPF3AQ9H1J1 476 aaKnown RBP20.68■□□□□ 0.9
HMGN1-209ENST00000463631 SLC38A10Q9HBR0 1119 aa20.68■□□□□ 0.9
HMGN1-209ENST00000463631 ECHDC1Q9NTX5 307 aa20.68■□□□□ 0.9
HMGN1-209ENST00000463631 ZHX1Q9UKY1 873 aaPredicted RBP20.68■□□□□ 0.9
HMGN1-209ENST00000463631 DNAJB2P25686 324 aa20.67■□□□□ 0.9
HMGN1-209ENST00000463631 OAZ1P54368 228 aa20.67■□□□□ 0.9
HMGN1-209ENST00000463631 KCNA10Q16322 511 aa20.67■□□□□ 0.9
HMGN1-209ENST00000463631 PCSK9Q8NBP7 692 aaKnown RBP20.67■□□□□ 0.9
HMGN1-209ENST00000463631 APPBP2Q92624 585 aa20.67■□□□□ 0.9
HMGN1-209ENST00000463631 MKL1Q969V6 931 aa20.67■□□□□ 0.9
HMGN1-209ENST00000463631 FGD4Q96M96 766 aa20.67■□□□□ 0.9
HMGN1-209ENST00000463631 GLT1D1Q96MS3 346 aa20.67■□□□□ 0.9
HMGN1-209ENST00000463631 ABHD16BQ9H3Z7 469 aa20.67■□□□□ 0.9
HMGN1-209ENST00000463631 MKNK2Q9HBH9 465 aa20.67■□□□□ 0.9
HMGN1-209ENST00000463631 FBXO40Q9UH90 709 aa20.67■□□□□ 0.9
HMGN1-209ENST00000463631 PLIN4Q96Q06 1357 aa20.67■□□□□ 0.9
HMGN1-209ENST00000463631 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.66■□□□□ 0.9
HMGN1-209ENST00000463631 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.66■□□□□ 0.9
HMGN1-209ENST00000463631 MYADML2A6NDP7 307 aa20.66■□□□□ 0.9
HMGN1-209ENST00000463631 ZBED4O75132 1171 aa20.66■□□□□ 0.9
HMGN1-209ENST00000463631 CDK7P50613 346 aa20.66■□□□□ 0.9
HMGN1-209ENST00000463631 ACVR2BQ13705 512 aa20.66■□□□□ 0.9
HMGN1-209ENST00000463631 MFSD5Q6N075 450 aa20.66■□□□□ 0.9
HMGN1-209ENST00000463631 CHST13Q8NET6 341 aa20.66■□□□□ 0.9
HMGN1-209ENST00000463631 ZNF287Q9HBT7 754 aa20.66■□□□□ 0.9
HMGN1-209ENST00000463631 EPB41L4AQ9HCS5 686 aaPredicted RBP20.66■□□□□ 0.9
HMGN1-209ENST00000463631 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.66■□□□□ 0.9
HMGN1-209ENST00000463631 NCOR1O75376 2440 aa20.65■□□□□ 0.9
HMGN1-209ENST00000463631 ADCY6O43306 1168 aa20.65■□□□□ 0.9
HMGN1-209ENST00000463631 GJA9P57773 515 aa20.65■□□□□ 0.9
HMGN1-209ENST00000463631 NKX3-2P78367 333 aa20.65■□□□□ 0.9
HMGN1-209ENST00000463631 MIER1Q8N108 512 aa20.65■□□□□ 0.9
HMGN1-209ENST00000463631 GMCL1P1Q8NEA9 526 aa20.65■□□□□ 0.9
HMGN1-209ENST00000463631 OSBP2Q969R2 916 aa20.65■□□□□ 0.9
HMGN1-209ENST00000463631 FEM1BQ9UK73 627 aa20.65■□□□□ 0.9
HMGN1-209ENST00000463631 LRRC37A2A6NM11 1700 aa20.64■□□□□ 0.9
HMGN1-209ENST00000463631 ZFYP08048 801 aaPredicted RBP20.64■□□□□ 0.89
HMGN1-209ENST00000463631 C6orf222P0C671 652 aaPredicted RBP20.64■□□□□ 0.89
HMGN1-209ENST00000463631 GNAT2P19087 354 aa20.64■□□□□ 0.89
HMGN1-209ENST00000463631 GRIN2CQ14957 1233 aa20.64■□□□□ 0.89
HMGN1-209ENST00000463631 CCDC144BQ3MJ40 725 aa20.64■□□□□ 0.89
HMGN1-209ENST00000463631 RASIP1Q5U651 963 aa20.64■□□□□ 0.89
HMGN1-209ENST00000463631 CCDC174Q6PII3 467 aa20.64■□□□□ 0.89
HMGN1-209ENST00000463631 CPXCR1Q8N123 301 aa20.64■□□□□ 0.89
HMGN1-209ENST00000463631 ANKRD35Q8N283 1001 aa20.64■□□□□ 0.89
HMGN1-209ENST00000463631 CEP95Q96GE4 821 aa20.64■□□□□ 0.89
HMGN1-209ENST00000463631 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.64■□□□□ 0.894e-7■■■□□ 17.3
HMGN1-209ENST00000463631 SPC25Q9HBM1 224 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms