RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 MRPL11Q9Y3B7 192 aaKnown RBP8.55□□□□□ -1.04
EPHA4-210ENST00000463446 TACC3Q9Y6A5 838 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 SNCAIPQ9Y6H5 919 aa8.55□□□□□ -1.04
EPHA4-210ENST00000463446 WDR33Q9C0J8 1336 aaKnown RBP8.54□□□□□ -1.04
EPHA4-210ENST00000463446 LAMB1P07942 1786 aa8.54□□□□□ -1.04
EPHA4-210ENST00000463446 FLOT1O75955 427 aa8.54□□□□□ -1.04
EPHA4-210ENST00000463446 SLC25A27O95847 323 aa8.54□□□□□ -1.04
EPHA4-210ENST00000463446 NDUFB10O96000 172 aa8.54□□□□□ -1.04
EPHA4-210ENST00000463446 GJB2P29033 226 aa8.54□□□□□ -1.04
EPHA4-210ENST00000463446 MAP2K2P36507 400 aa8.54□□□□□ -1.04
EPHA4-210ENST00000463446 MTMR2Q13614 643 aa8.54□□□□□ -1.04
EPHA4-210ENST00000463446 PFKFB3Q16875 520 aaPredicted RBP8.54□□□□□ -1.04
EPHA4-210ENST00000463446 CSPP1Q1MSJ5 1256 aa8.54□□□□□ -1.04
EPHA4-210ENST00000463446 SPRYD7Q5W111 196 aa8.54□□□□□ -1.04
EPHA4-210ENST00000463446 PPP1R18Q6NYC8 613 aa8.54□□□□□ -1.04
EPHA4-210ENST00000463446 ANKRD23Q86SG2 305 aa8.54□□□□□ -1.04
EPHA4-210ENST00000463446 CCAR1Q8IX12 1150 aaKnown RBP8.54□□□□□ -1.04
EPHA4-210ENST00000463446 OTUD5Q96G74 571 aa8.54□□□□□ -1.04
EPHA4-210ENST00000463446 C8orf76Q96K31 380 aa8.54□□□□□ -1.04
EPHA4-210ENST00000463446 MPHOSPH6Q99547 160 aaKnown RBP8.54□□□□□ -1.04
EPHA4-210ENST00000463446 NAP1L4Q99733 375 aaKnown RBP8.54□□□□□ -1.04
EPHA4-210ENST00000463446 SLC26A6Q9BXS9 759 aa8.54□□□□□ -1.04
EPHA4-210ENST00000463446 TANGO6Q9C0B7 1094 aa8.54□□□□□ -1.04
EPHA4-210ENST00000463446 EHMT1Q9H9B1 1298 aa8.54□□□□□ -1.04
EPHA4-210ENST00000463446 GPCPD1Q9NPB8 672 aa8.54□□□□□ -1.04
EPHA4-210ENST00000463446 FBXO40Q9UH90 709 aa8.54□□□□□ -1.04
EPHA4-210ENST00000463446 SCAF8Q9UPN6 1271 aaKnown RBP8.54□□□□□ -1.04
EPHA4-210ENST00000463446 AGTPBP1Q9UPW5 1226 aa8.54□□□□□ -1.04
EPHA4-210ENST00000463446 HPS5Q9UPZ3 1129 aa8.54□□□□□ -1.04
EPHA4-210ENST00000463446 RABGAP1Q9Y3P9 1069 aa8.54□□□□□ -1.04
EPHA4-210ENST00000463446 CDK5RAP2Q96SN8 1893 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 A0A1W2PRG0 241 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 PTPDC1A2A3K4 754 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 TESPA1A2RU30 521 aaPredicted RBP8.53□□□□□ -1.04
EPHA4-210ENST00000463446 TRAF5O00463 557 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 IRF6O14896 467 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 ATP2A1O14983 1001 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 FOSP01100 380 aaPredicted RBP8.53□□□□□ -1.04
EPHA4-210ENST00000463446 POTEIP0CG38 1075 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 POTEJP0CG39 1038 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 SCG2P13521 617 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 PTMSP20962 102 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 HMGCS2P54868 508 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 NTRK3Q16288 839 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 SYDE2Q5VT97 1194 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 LBX2Q6XYB7 198 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 FBXO11Q86XK2 927 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 CCDC144CPQ8IYA2 1237 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 ADGRF4Q8IZF3 695 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 LRRC47Q8N1G4 583 aaKnown RBP8.53□□□□□ -1.04
EPHA4-210ENST00000463446 NECAB1Q8N987 351 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 NSUN7Q8NE18 718 aaKnown RBP8.53□□□□□ -1.04
EPHA4-210ENST00000463446 WNK4Q96J92 1243 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 ALG1Q9BT22 464 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 RPAP3Q9H6T3 665 aaPredicted RBP8.53□□□□□ -1.04
EPHA4-210ENST00000463446 VAT1LQ9HCJ6 419 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 EMILIN3Q9NT22 766 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 SLC5A4Q9NY91 659 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 CFAP45Q9UL16 551 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 MTMR7Q9Y216 660 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 ABCB11O95342 1321 aa8.53□□□□□ -1.04
EPHA4-210ENST00000463446 POLR2AP24928 1970 aaKnown RBP8.52□□□□□ -1.05
EPHA4-210ENST00000463446 ESYT2A0FGR8 921 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 GOLGA6L22H0YM25 854 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 SMIM22K7EJ46 135 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 STX6O43752 255 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 STRNO43815 780 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 ICAM1P05362 532 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 VCAM1P19320 739 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 CDC27P30260 824 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 TM4SF4P48230 202 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 NLRP5P59047 1200 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 EVX2Q03828 476 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 RRP1BQ14684 758 aaKnown RBP8.52□□□□□ -1.05
EPHA4-210ENST00000463446 ZYXQ15942 572 aaKnown RBP8.52□□□□□ -1.05
EPHA4-210ENST00000463446 FAM83BQ5T0W9 1011 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 GADL1Q6ZQY3 521 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 KCTD1Q719H9 257 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 BRAPQ7Z569 592 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 CDAN1Q8IWY9 1227 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 SPICE1Q8N0Z3 855 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 CCDC82Q8N4S0 544 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 SRBD1Q8N5C6 995 aaKnown RBP8.52□□□□□ -1.05
EPHA4-210ENST00000463446 FBXO18Q8NFZ0 1043 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 ACER1Q8TDN7 264 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 SMCR8Q8TEV9 937 aaPredicted RBP8.52□□□□□ -1.05
EPHA4-210ENST00000463446 MTMR8Q96EF0 704 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 PARK7Q99497 189 aaKnown RBP8.52□□□□□ -1.05
EPHA4-210ENST00000463446 LARP6Q9BRS8 491 aaKnown RBP8.52□□□□□ -1.05
EPHA4-210ENST00000463446 FOXP1Q9H334 677 aaPredicted RBP8.52□□□□□ -1.05
EPHA4-210ENST00000463446 GPHNQ9NQX3 736 aaPredicted RBP8.52□□□□□ -1.05
EPHA4-210ENST00000463446 FAM217BQ9NTX9 383 aaPredicted RBP8.52□□□□□ -1.05
EPHA4-210ENST00000463446 BARHL2Q9NY43 387 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 PPP1R9AQ9ULJ8 1098 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 ADAMTS5Q9UNA0 930 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 PCDHA1Q9Y5I3 950 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 PAPPA2Q9BXP8 1791 aa8.52□□□□□ -1.05
EPHA4-210ENST00000463446 DDX60LQ5H9U9 1706 aaKnown RBP8.51□□□□□ -1.05
EPHA4-210ENST00000463446 GOLGB1Q14789 3259 aaKnown RBP8.51□□□□□ -1.05
EPHA4-210ENST00000463446 MYH8P13535 1937 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms