RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 GH2P01242 217 aa16.58■□□□□ 0.24
C9orf3-211ENST00000463372 LDHCP07864 332 aa16.58■□□□□ 0.24
C9orf3-211ENST00000463372 MECOMQ03112 1051 aa16.58■□□□□ 0.24
C9orf3-211ENST00000463372 COG2Q14746 738 aa16.58■□□□□ 0.24
C9orf3-211ENST00000463372 GNASQ5JWF2 1037 aa16.58■□□□□ 0.24
C9orf3-211ENST00000463372 ERICH6Q7L0X2 663 aa16.58■□□□□ 0.24
C9orf3-211ENST00000463372 DGLUCYQ7Z3D6 616 aa16.58■□□□□ 0.24
C9orf3-211ENST00000463372 DEFB128Q7Z7B8 93 aa16.58■□□□□ 0.24
C9orf3-211ENST00000463372 RNF135Q8IUD6 432 aa16.58■□□□□ 0.24
C9orf3-211ENST00000463372 FSD1Q9BTV5 496 aa16.58■□□□□ 0.24
C9orf3-211ENST00000463372 KIAA1683Q9H0B3 1180 aa16.58■□□□□ 0.24
C9orf3-211ENST00000463372 DNAJC18Q9H819 358 aa16.58■□□□□ 0.24
C9orf3-211ENST00000463372 TLR9Q9NR96 1032 aa16.58■□□□□ 0.24
C9orf3-211ENST00000463372 ZFHX4Q86UP3 3567 aa16.58■□□□□ 0.24
C9orf3-211ENST00000463372 PGK2P07205 417 aa16.57■□□□□ 0.24
C9orf3-211ENST00000463372 PHKA1P46020 1223 aa16.57■□□□□ 0.24
C9orf3-211ENST00000463372 GSTO1P78417 241 aa16.57■□□□□ 0.24
C9orf3-211ENST00000463372 EP400NLQ6ZTU2 488 aa16.57■□□□□ 0.24
C9orf3-211ENST00000463372 MB21D1Q8N884 522 aa16.57■□□□□ 0.24
C9orf3-211ENST00000463372 MMP19Q99542 508 aa16.57■□□□□ 0.24
C9orf3-211ENST00000463372 DIS3Q9Y2L1 958 aaKnown RBP16.57■□□□□ 0.24
C9orf3-211ENST00000463372 ALDH1L1O75891 902 aa16.56■□□□□ 0.24
C9orf3-211ENST00000463372 ATP2B3Q16720 1220 aa16.56■□□□□ 0.24
C9orf3-211ENST00000463372 TSR2Q969E8 191 aaKnown RBP16.56■□□□□ 0.24
C9orf3-211ENST00000463372 VWCEQ96DN2 955 aa16.56■□□□□ 0.24
C9orf3-211ENST00000463372 SUGCTQ9HAC7 445 aa16.56■□□□□ 0.24
C9orf3-211ENST00000463372 ALG13Q9NP73 1137 aaKnown RBP16.56■□□□□ 0.24
C9orf3-211ENST00000463372 ZHX1Q9UKY1 873 aaPredicted RBP16.56■□□□□ 0.24
C9orf3-211ENST00000463372 MTUS1Q9ULD2 1270 aa16.56■□□□□ 0.24
C9orf3-211ENST00000463372 PTPRSQ13332 1948 aa16.56■□□□□ 0.24
C9orf3-211ENST00000463372 ZNF292O60281 2723 aa16.55■□□□□ 0.24
C9orf3-211ENST00000463372 MCM3APO60318 1980 aa16.55■□□□□ 0.24
C9orf3-211ENST00000463372 IRX5P78411 483 aaPredicted RBP16.55■□□□□ 0.24
C9orf3-211ENST00000463372 KCTD2Q14681 263 aa16.55■□□□□ 0.24
C9orf3-211ENST00000463372 RAB3GAP1Q15042 981 aa16.55■□□□□ 0.24
C9orf3-211ENST00000463372 RABL6Q3YEC7 729 aaPredicted RBP16.55■□□□□ 0.24
C9orf3-211ENST00000463372 METTL16Q86W50 562 aaKnown RBP16.55■□□□□ 0.24
C9orf3-211ENST00000463372 PCGF6Q9BYE7 350 aa16.55■□□□□ 0.24
C9orf3-211ENST00000463372 TANGO6Q9C0B7 1094 aa16.55■□□□□ 0.24
C9orf3-211ENST00000463372 MAP1BP46821 2468 aaKnown RBP16.55■□□□□ 0.24
C9orf3-211ENST00000463372 FOCADQ5VW36 1801 aa16.54■□□□□ 0.24
C9orf3-211ENST00000463372 NBPF20Q3BBV1 942 aa16.54■□□□□ 0.24
C9orf3-211ENST00000463372 ZNF792Q3KQV3 632 aa16.54■□□□□ 0.24
C9orf3-211ENST00000463372 AGBL1Q96MI9 1066 aa16.54■□□□□ 0.24
C9orf3-211ENST00000463372 NOL10Q9BSC4 688 aaKnown RBP16.54■□□□□ 0.24
C9orf3-211ENST00000463372 TRPV6Q9H1D0 765 aa16.54■□□□□ 0.24
C9orf3-211ENST00000463372 DMDP11532 3685 aa16.53■□□□□ 0.24
C9orf3-211ENST00000463372 EYA2O00167 538 aa16.53■□□□□ 0.24
C9orf3-211ENST00000463372 KDM4AO75164 1064 aa16.53■□□□□ 0.24
C9orf3-211ENST00000463372 SLC25A27O95847 323 aa16.53■□□□□ 0.24
C9orf3-211ENST00000463372 NBPF7P0C2Y1 421 aaPredicted RBP16.53■□□□□ 0.24
C9orf3-211ENST00000463372 VCPP55072 806 aaKnown RBP16.53■□□□□ 0.24
C9orf3-211ENST00000463372 GJA9P57773 515 aa16.53■□□□□ 0.24
C9orf3-211ENST00000463372 ITGA7Q13683 1181 aa16.53■□□□□ 0.24
C9orf3-211ENST00000463372 ATF7IPQ6VMQ6 1270 aa16.53■□□□□ 0.24
C9orf3-211ENST00000463372 ADSSL1Q8N142 457 aa16.53■□□□□ 0.24
C9orf3-211ENST00000463372 SLC43A3Q8NBI5 491 aa16.53■□□□□ 0.24
C9orf3-211ENST00000463372 TET1Q8NFU7 2136 aa16.53■□□□□ 0.24
C9orf3-211ENST00000463372 TGS1Q96RS0 853 aaKnown RBP16.53■□□□□ 0.24
C9orf3-211ENST00000463372 ZBED2Q9BTP6 218 aa16.53■□□□□ 0.24
C9orf3-211ENST00000463372 SEZ6LQ9BYH1 1024 aa16.53■□□□□ 0.24
C9orf3-211ENST00000463372 SRCIN1Q9C0H9 1055 aa16.53■□□□□ 0.24
C9orf3-211ENST00000463372 UPF3AQ9H1J1 476 aaKnown RBP16.53■□□□□ 0.24
C9orf3-211ENST00000463372 LCHNA4D1U4 455 aa16.52■□□□□ 0.24
C9orf3-211ENST00000463372 B4GALT4O60513 344 aa16.52■□□□□ 0.24
C9orf3-211ENST00000463372 CABYRO75952 493 aa16.52■□□□□ 0.24
C9orf3-211ENST00000463372 AVPR2P30518 371 aa16.52■□□□□ 0.24
C9orf3-211ENST00000463372 NBL1P41271 181 aa16.52■□□□□ 0.24
C9orf3-211ENST00000463372 RASGRF1Q13972 1273 aa16.52■□□□□ 0.24
C9orf3-211ENST00000463372 COL9A2Q14055 689 aaPredicted RBP16.52■□□□□ 0.24
C9orf3-211ENST00000463372 SLC4A10Q6U841 1118 aa16.52■□□□□ 0.24
C9orf3-211ENST00000463372 MSL3Q8N5Y2 521 aaKnown RBP16.52■□□□□ 0.24
C9orf3-211ENST00000463372 ACER1Q8TDN7 264 aa16.52■□□□□ 0.24
C9orf3-211ENST00000463372 SH3RF3Q8TEJ3 882 aaPredicted RBP16.52■□□□□ 0.24
C9orf3-211ENST00000463372 PABPC5Q96DU9 382 aaKnown RBP16.52■□□□□ 0.24
C9orf3-211ENST00000463372 CTNNA3Q9UI47 895 aa16.52■□□□□ 0.24
C9orf3-211ENST00000463372 ADAMTS8Q9UP79 889 aa16.52■□□□□ 0.24
C9orf3-211ENST00000463372 EP300Q09472 2414 aaPredicted RBP16.52■□□□□ 0.24
C9orf3-211ENST00000463372 DNAH14Q0VDD8 3507 aa16.52■□□□□ 0.23
C9orf3-211ENST00000463372 PDS5AQ29RF7 1337 aaKnown RBP16.51■□□□□ 0.23
C9orf3-211ENST00000463372 MYH1P12882 1939 aa16.51■□□□□ 0.23
C9orf3-211ENST00000463372 HLA-DOAP06340 250 aa16.51■□□□□ 0.23
C9orf3-211ENST00000463372 KCNJ6P48051 423 aa16.51■□□□□ 0.23
C9orf3-211ENST00000463372 CCDC102BQ68D86 513 aa16.51■□□□□ 0.23
C9orf3-211ENST00000463372 ANKRD44Q8N8A2 993 aa16.51■□□□□ 0.23
C9orf3-211ENST00000463372 ZNF384Q8TF68 577 aa16.51■□□□□ 0.23
C9orf3-211ENST00000463372 NKD2Q969F2 451 aaPredicted RBP16.51■□□□□ 0.23
C9orf3-211ENST00000463372 FTOQ9C0B1 505 aaKnown RBP eCLIP16.51■□□□□ 0.23
C9orf3-211ENST00000463372 SIL1Q9H173 461 aa16.51■□□□□ 0.23
C9orf3-211ENST00000463372 PALD1Q9ULE6 856 aa16.51■□□□□ 0.23
C9orf3-211ENST00000463372 MYO7AQ13402 2215 aa16.5■□□□□ 0.23
C9orf3-211ENST00000463372 APAF1O14727 1248 aa16.5■□□□□ 0.23
C9orf3-211ENST00000463372 ZBTB22O15209 634 aa16.5■□□□□ 0.23
C9orf3-211ENST00000463372 NUBP1P53384 320 aa16.5■□□□□ 0.23
C9orf3-211ENST00000463372 ERVK-21P61565 698 aa16.5■□□□□ 0.23
C9orf3-211ENST00000463372 CXCL17Q6UXB2 119 aa16.5■□□□□ 0.23
C9orf3-211ENST00000463372 MAPKAPK5Q8IW41 473 aa16.5■□□□□ 0.23
C9orf3-211ENST00000463372 ANKRD11Q6UB99 2663 aaPredicted RBP16.5■□□□□ 0.23
C9orf3-211ENST00000463372 SNAI1O95863 264 aaPredicted RBP16.49■□□□□ 0.23
C9orf3-211ENST00000463372 RFC2P35250 354 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms